MCFD2-AS1

Summary

MCFD2-AS1 (MCFD2 antisense RNA 1, HGNC:58223) is a long non-coding RNA gene on chromosome 2p21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58223
Approved symbol	MCFD2-AS1
Name	MCFD2 antisense RNA 1
Location	2p21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228925
Ensembl biotype	lncRNA
Entrez	139355231
RNAcentral	URS0002A2A7B5 — lncRNA, 1874 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000429761

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429761 — 2 exons

Exon	Start	End
ENSE00004113425	46899236	46899314
ENSE00004113426	46906884	46908678

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 79.15.

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.15	silver quality
body of pancreas	UBERON:0001150	71.23	gold quality
left adrenal gland cortex	UBERON:0035825	68.39	gold quality
left adrenal gland	UBERON:0001234	68.04	gold quality
bone marrow cell	CL:0002092	67.38	silver quality
adrenal gland	UBERON:0002369	67.03	gold quality
stromal cell of endometrium	CL:0002255	66.66	gold quality
right adrenal gland	UBERON:0001233	66.57	gold quality
right adrenal gland cortex	UBERON:0035827	66.20	gold quality
tonsil	UBERON:0002372	65.95	gold quality
pancreas	UBERON:0001264	65.60	gold quality
mucosa of stomach	UBERON:0001199	65.49	gold quality
left ovary	UBERON:0002119	64.91	gold quality
ovary	UBERON:0000992	64.62	gold quality
colonic epithelium	UBERON:0000397	64.15	silver quality
left lobe of thyroid gland	UBERON:0001120	63.97	gold quality
saliva-secreting gland	UBERON:0001044	63.96	gold quality
minor salivary gland	UBERON:0001830	63.58	gold quality
thyroid gland	UBERON:0002046	63.48	gold quality
right ovary	UBERON:0002118	63.42	gold quality
skeletal muscle tissue	UBERON:0001134	62.92	gold quality
descending thoracic aorta	UBERON:0002345	62.81	gold quality
bone marrow	UBERON:0002371	62.77	gold quality
adrenal tissue	UBERON:0018303	62.42	gold quality
right lobe of thyroid gland	UBERON:0001119	62.32	gold quality
ascending aorta	UBERON:0001496	62.31	gold quality
thoracic aorta	UBERON:0001515	62.28	gold quality
popliteal artery	UBERON:0002250	61.81	gold quality
tibial artery	UBERON:0007610	61.78	gold quality
muscle tissue	UBERON:0002385	61.64	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-MTAB-9543	yes	7.89
E-ANND-3	no	2.71

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.