MCTP1-AS1

Summary

MCTP1-AS1 (MCTP1 antisense RNA 1, HGNC:54085) is a long non-coding RNA gene on chromosome 5q15.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54085
Approved symbol	MCTP1-AS1
Name	MCTP1 antisense RNA 1
Location	5q15
Locus type	RNA, long non-coding
Status	Approved
Aliases	ENST00000503710
Ensembl gene	ENSG00000249545
Ensembl biotype	lncRNA
Entrez	113523641
RNAcentral	URS0002853A98 — lncRNA, 980 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000503710

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503710 — 2 exons

Exon	Start	End
ENSE00002060118	94979151	94979607
ENSE00002083216	94980824	94980893

Expression profiles

Bgee: expression breadth broad, 70 present calls, max score 75.56.

Top tissues by expression

75 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	75.56	gold quality
bone marrow cell	CL:0002092	71.52	gold quality
bone marrow	UBERON:0002371	68.38	gold quality
quadriceps femoris	UBERON:0001377	64.14	gold quality
cerebellar vermis	UBERON:0004720	63.05	gold quality
tonsil	UBERON:0002372	61.75	silver quality
skeletal muscle tissue	UBERON:0001134	61.35	silver quality
calcaneal tendon	UBERON:0003701	60.77	gold quality
thymus	UBERON:0002370	59.90	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	59.35	gold quality
blood	UBERON:0000178	58.31	gold quality
pancreas	UBERON:0001264	58.04	silver quality
prefrontal cortex	UBERON:0000451	55.71	gold quality
gall bladder	UBERON:0002110	55.35	gold quality
monocyte	CL:0000576	54.24	gold quality
liver	UBERON:0002107	53.14	silver quality
lung	UBERON:0002048	53.04	gold quality
thoracic mammary gland	UBERON:0005200	52.37	gold quality
corpus callosum	UBERON:0002336	51.57	silver quality
left testis	UBERON:0004533	50.11	gold quality
testis	UBERON:0000473	49.53	gold quality
left adrenal gland cortex	UBERON:0035825	48.93	silver quality
small intestine Peyer’s patch	UBERON:0003454	48.83	gold quality
gastrocnemius	UBERON:0001388	48.25	silver quality
multicellular organism	UBERON:0000468	48.20	gold quality
intestine	UBERON:0000160	47.20	gold quality
colon	UBERON:0001155	46.90	gold quality
heart left ventricle	UBERON:0002084	46.73	silver quality
heart	UBERON:0000948	46.59	silver quality
putamen	UBERON:0001874	46.44	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.