ME2
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Summary
ME2 (malic enzyme 2, HGNC:6984) is a protein-coding gene on chromosome 18q21.2, encoding NAD-dependent malic enzyme, mitochondrial (P23368). NAD-dependent mitochondrial malic enzyme that catalyzes the oxidative decarboxylation of malate to pyruvate.
This gene encodes a mitochondrial NAD-dependent malic enzyme, a homotetrameric protein, that catalyzes the oxidative decarboxylation of malate to pyruvate. It had previously been weakly linked to a syndrome known as Friedreich ataxia that has since been shown to be the result of mutation in a completely different gene. Certain single-nucleotide polymorphism haplotypes of this gene have been shown to increase the risk for idiopathic generalized epilepsy. Alternatively spliced transcript variants encoding different isoforms found for this gene.
Source: NCBI Gene 4200 — RefSeq curated summary.
At a glance
- Gene–disease (curated): inborn disorder of energy metabolism (Limited, GenCC) — +1 more curated relationship
- GWAS associations: 4
- Clinical variants (ClinVar): 97 total — 1 likely-pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_002396
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6984 |
| Approved symbol | ME2 |
| Name | malic enzyme 2 |
| Location | 18q21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000082212 |
| Ensembl biotype | protein_coding |
| OMIM | 154270 |
| Entrez | 4200 |
Gene structure
Transcript identifiers
Ensembl transcripts: 25 — 13 protein_coding, 8 nonsense_mediated_decay, 4 retained_intron
ENST00000321341, ENST00000382927, ENST00000585680, ENST00000589330, ENST00000591925, ENST00000638410, ENST00000638768, ENST00000638937, ENST00000639115, ENST00000639255, ENST00000639398, ENST00000639612, ENST00000639663, ENST00000639665, ENST00000639688, ENST00000639850, ENST00000640530, ENST00000640965, ENST00000640967, ENST00000901565, ENST00000901566, ENST00000901567, ENST00000935531, ENST00000935532, ENST00000953407
RefSeq mRNA: 2 — MANE Select: NM_002396
NM_001168335, NM_002396
CCDS: CCDS11948, CCDS54187
Canonical transcript exons
ENST00000321341 — 16 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000950181 | 50924098 | 50924212 |
| ENSE00000950182 | 50925756 | 50925898 |
| ENSE00000950184 | 50939570 | 50939640 |
| ENSE00000996845 | 50908063 | 50908196 |
| ENSE00000996846 | 50912801 | 50912950 |
| ENSE00001151634 | 50921074 | 50921187 |
| ENSE00001151639 | 50920661 | 50920758 |
| ENSE00001151654 | 50917347 | 50917508 |
| ENSE00001151659 | 50916168 | 50916243 |
| ENSE00001222938 | 50895809 | 50895928 |
| ENSE00001605064 | 50947017 | 50954257 |
| ENSE00003526712 | 50932258 | 50932360 |
| ENSE00003547112 | 50918110 | 50918213 |
| ENSE00003564587 | 50920456 | 50920565 |
| ENSE00003645078 | 50940288 | 50940386 |
| ENSE00003808655 | 50879118 | 50879308 |
Expression profiles
Bgee: expression breadth ubiquitous, 293 present calls, max score 98.23.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 45.5385 / max 937.1130, expressed in 1818 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 170265 | 38.6615 | 1815 |
| 170264 | 6.1964 | 1535 |
| 208557 | 0.6807 | 417 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| choroid plexus epithelium | UBERON:0003911 | 98.23 | gold quality |
| jejunal mucosa | UBERON:0000399 | 97.53 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 96.78 | gold quality |
| colonic mucosa | UBERON:0000317 | 96.28 | gold quality |
| myocardium | UBERON:0002349 | 96.27 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 96.18 | gold quality |
| monocyte | CL:0000576 | 96.07 | gold quality |
| duodenum | UBERON:0002114 | 96.03 | gold quality |
| mononuclear cell | CL:0000842 | 95.98 | gold quality |
| heart right ventricle | UBERON:0002080 | 95.89 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 95.83 | gold quality |
| leukocyte | CL:0000738 | 95.77 | gold quality |
| jejunum | UBERON:0002115 | 95.59 | gold quality |
| rectum | UBERON:0001052 | 95.40 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 94.82 | gold quality |
| buccal mucosa cell | CL:0002336 | 94.72 | gold quality |
| ileal mucosa | UBERON:0000331 | 94.66 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 94.59 | gold quality |
| cardiac atrium | UBERON:0002081 | 94.05 | gold quality |
| right atrium auricular region | UBERON:0006631 | 93.82 | gold quality |
| vena cava | UBERON:0004087 | 93.69 | gold quality |
| gluteal muscle | UBERON:0002000 | 93.62 | gold quality |
| seminal vesicle | UBERON:0000998 | 93.61 | gold quality |
| vermiform appendix | UBERON:0001154 | 93.58 | gold quality |
| adrenal tissue | UBERON:0018303 | 93.53 | gold quality |
| caecum | UBERON:0001153 | 93.51 | gold quality |
| diaphragm | UBERON:0001103 | 93.44 | gold quality |
| deltoid | UBERON:0001476 | 93.36 | gold quality |
| cortical plate | UBERON:0005343 | 93.35 | gold quality |
| bone marrow | UBERON:0002371 | 93.34 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 7.60 |
| E-CURD-97 | no | 1131.43 |
| E-GEOD-106540 | no | 198.25 |
| E-MTAB-6524 | no | 119.45 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
109 targeting ME2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-3120-5P | 100.00 | 65.56 | 965 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-3925-3P | 100.00 | 69.95 | 1237 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4645-5P | 99.98 | 65.81 | 1284 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-205-3P | 99.92 | 69.92 | 3165 |
| HSA-MIR-10527-5P | 99.91 | 72.28 | 3754 |
| HSA-MIR-9902 | 99.89 | 69.15 | 2250 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-548AR-3P | 99.85 | 71.26 | 3889 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-944 | 99.82 | 70.85 | 3042 |
| HSA-MIR-3180-5P | 99.82 | 69.12 | 2422 |
| HSA-MIR-4760-5P | 99.80 | 69.88 | 1619 |
| HSA-MIR-4659A-3P | 99.80 | 72.62 | 4248 |
Literature-anchored findings (GeneRIF, showing 19)
- An ME2-centered nine-SNP haplotype, when present homozygously, increases the risk for IGE (odds ratio 6.1; 95% confidence interval 2.9-12.7) compared with any other genotype (PMID:15532013)
- Site directed mutagenesis was used to detrmine which amino acids in the active site of human mitochondrial NAD+-dependent malic enzyme are necessary for the inhibitory effects of ATP. (PMID:16171388)
- These findings provide a molecular rationale for the role of hS14 in TR-dependent transcriptional activation of the expression of specific genes. (PMID:17418816)
- Schizophrenic subjects are identified with mitochondrial genes involved in oxidative metabolism as showing consistently decreased expression, including ME2. (PMID:17638511)
- Single nucleotide polymorphism in ME2 gene is associated with acute lymphoblastic leukemia. (PMID:19066393)
- ME2 activity in Islets of Langerhans cells was measured by a spectrophotometric enzyme assay by utilizing the distinct kinetic properties. (PMID:19691144)
- Depletion of malic enzyme 2 induced erythroid differentiation in human erythroleukemia cells. (PMID:20824065)
- p53 represses the expression of the tricarboxylic-acid-cycle-associated malic enzymes ME1 and ME2 in human and mouse cells (PMID:23334421)
- Three SNP alleles in BRD2, Cx-36, and ME2 and microdeletions in 15q13.3, 15q11.2, and 16p13.11 also contribute risk to juvenile myclonic epilepsy. (PMID:23756480)
- Data indicate that malic enzyme 2 knockdown impacts phosphatidylinositol 3-kinases/proto-oncogene protein akt (PI3K/AKT) signaling. (PMID:24957098)
- ME2 might be an important factor in melanoma progression and a novel biomarker of invasion. (PMID:25202825)
- ME1/ME2 expression phenotype may have a potential to be a valuable marker for sebaceous differentiation in sebaceous lesions. (PMID:26381116)
- ME2 was involved in glioblastoma multiforme growth, invasion, migration, Reactive oxygen species and ATP production. (PMID:27166188)
- deletion of malic enzyme 2 confers collateral lethality in pancreatic cancer (PMID:28099419)
- The chromosome 18q21 deletion in nearly one third of pancreatic adenocarcinomas eliminates not only the tumor suppressor SMAD4, but also neighboring genes with important cellular roles, such as ME2 (PMID:28174172)
- influences susceptibility to adolescent-onset genetic generalized epilepsy (PMID:30719716)
- Expression levels of SIX1, ME2, and AP2M1 in adenoid cystic carcinoma and mucoepidermoid carcinoma. (PMID:32564485)
- Malic enzyme 2 maintains protein stability of mutant p53 through 2-hydroxyglutarate. (PMID:35228743)
- SIRT5-mediated ME2 desuccinylation promotes cancer growth by enhancing mitochondrial respiration. (PMID:38007551)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | me2 | ENSDARG00000100718 |
| mus_musculus | Me2 | ENSMUSG00000024556 |
| rattus_norvegicus | Me2 | ENSRNOG00000015582 |
| drosophila_melanogaster | Men | FBGN0002719 |
| drosophila_melanogaster | Menl-2 | FBGN0029153 |
| drosophila_melanogaster | Menl-1 | FBGN0029154 |
| drosophila_melanogaster | Men-b | FBGN0029155 |
| drosophila_melanogaster | CG7848 | FBGN0034127 |
| caenorhabditis_elegans | WBGENE00012983 |
Paralogs (2): ME1 (ENSG00000065833), ME3 (ENSG00000151376)
Protein
Protein identifiers
NAD-dependent malic enzyme, mitochondrial — P23368 (reviewed: P23368)
Alternative names: Malic enzyme 2
All UniProt accessions (13): P23368, A0A1W2PPH1, A0A1W2PPY2, A0A1W2PQ37, A0A1W2PQF8, A0A1W2PQH3, A0A1W2PQH4, A0A1W2PQT3, A0A1W2PQY8, A0A1W2PR68, A0A1W2PRH1, A0A1W2PRS2, A0A1W2PRY9
UniProt curated annotations — full annotation on UniProt →
Function. NAD-dependent mitochondrial malic enzyme that catalyzes the oxidative decarboxylation of malate to pyruvate.
Subunit / interactions. Homotetramer.
Subcellular location. Mitochondrion matrix.
Activity regulation. Subject to allosteric activation by fumarate.
Cofactor. Divalent metal cations. Prefers magnesium or manganese.
Miscellaneous. This isoenzyme can also use NADP(+) but is more effective with NAD(+).
Similarity. Belongs to the malic enzymes family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P23368-1 | 1 | yes |
| P23368-2 | 2 |
RefSeq proteins (2): NP_001161807, NP_002387* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001891 | Malic_OxRdtase | Family |
| IPR012301 | Malic_N_dom | Domain |
| IPR012302 | Malic_NAD-bd | Domain |
| IPR015884 | Malic_enzyme_CS | Conserved_site |
| IPR036291 | NAD(P)-bd_dom_sf | Homologous_superfamily |
| IPR037062 | Malic_N_dom_sf | Homologous_superfamily |
| IPR046346 | Aminoacid_DH-like_N_sf | Homologous_superfamily |
Pfam: PF00390, PF03949
Enzyme classification (BRENDA):
- EC 1.1.1.38 — malate dehydrogenase (oxaloacetate-decarboxylating) (BRENDA: 31 organisms, 27 substrates, 60 inhibitors, 84 Km, 25 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| L-MALATE | 0.19–50 | 31 |
| NAD+ | 0.004–17.2 | 28 |
| NICOTINAMIDE CYTOSINE DINUCLEOTIDE | 0.13–102 | 8 |
| (S)-MALATE | 0.42–15.6 | 5 |
| NADH | 0.025–1.4 | 5 |
| OXALOACETATE | 2.1–5 | 3 |
| MN2+ | 0.12–0.32 | 2 |
| NADP+ | 2.3 | 1 |
| PYRUVATE | — | 0 |
Catalyzed reactions (Rhea), 2 shown:
- (S)-malate + NAD(+) = pyruvate + CO2 + NADH (RHEA:12653)
- oxaloacetate + H(+) = pyruvate + CO2 (RHEA:15641)
UniProt features (86 total): helix 32, strand 18, binding site 13, turn 8, modified residue 5, active site 2, sequence variant 2, mutagenesis site 2, transit peptide 1, chain 1, splice variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
18 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9AYI | X-RAY DIFFRACTION | 1.89 |
| 1PJ3 | X-RAY DIFFRACTION | 2.1 |
| 1QR6 | X-RAY DIFFRACTION | 2.1 |
| 1DO8 | X-RAY DIFFRACTION | 2.2 |
| 1GZ4 | X-RAY DIFFRACTION | 2.2 |
| 1GZ3 | X-RAY DIFFRACTION | 2.3 |
| 1PJ2 | X-RAY DIFFRACTION | 2.3 |
| 1PJ4 | X-RAY DIFFRACTION | 2.3 |
| 9MYF | X-RAY DIFFRACTION | 2.45 |
| 7BSJ | X-RAY DIFFRACTION | 2.48 |
| 7BSK | X-RAY DIFFRACTION | 2.55 |
| 7BSL | X-RAY DIFFRACTION | 2.55 |
| 1EFK | X-RAY DIFFRACTION | 2.6 |
| 1EFL | X-RAY DIFFRACTION | 2.6 |
| 7XDE | ELECTRON MICROSCOPY | 2.72 |
| 7XDF | ELECTRON MICROSCOPY | 2.72 |
| 7XDG | ELECTRON MICROSCOPY | 2.84 |
| 1PJL | X-RAY DIFFRACTION | 2.9 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P23368-F1 | 94.55 | 0.91 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 112 (proton donor); 183 (proton acceptor)
Ligand- & substrate-binding residues (13): 259; 279; 312; 314; 315; 421; 466; 67; 91; 165; 165; 255 …
Post-translational modifications (5): 156, 224, 240, 272, 346
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 67 | abolishes activation by fumarate. |
| 91 | abolishes activation by fumarate. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-70268 | Pyruvate metabolism |
| R-HSA-9837999 | Mitochondrial protein degradation |
| R-HSA-1428517 | Aerobic respiration and respiratory electron transport |
| R-HSA-1430728 | Metabolism |
| R-HSA-392499 | Metabolism of proteins |
MSigDB gene sets: 181 (showing top):
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_NADPPLUS_METABOLIC_PROCESS, CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, SHAFFER_IRF4_TARGETS_IN_ACTIVATED_B_LYMPHOCYTE, THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_DN, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, MODULE_528, MODULE_16, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, SHIPP_DLBCL_CURED_VS_FATAL_DN, MODULE_503, GOBP_DICARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS
GO Biological Process (2): malate metabolic process (GO:0006108), regulation of NADP metabolic process (GO:1902031)
GO Molecular Function (10): malic enzyme activity (GO:0004470), malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471), malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473), oxaloacetate decarboxylase activity (GO:0008948), electron transfer activity (GO:0009055), metal ion binding (GO:0046872), NAD binding (GO:0051287), catalytic activity (GO:0003824), oxidoreductase activity (GO:0016491), oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)
GO Cellular Component (2): mitochondrion (GO:0005739), mitochondrial matrix (GO:0005759)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Aerobic respiration and respiratory electron transport | 1 |
| Metabolism of proteins | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| malic enzyme activity | 2 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 2 |
| molecular_function | 2 |
| dicarboxylic acid metabolic process | 1 |
| NADP+ metabolic process | 1 |
| regulation of purine nucleotide metabolic process | 1 |
| malate dehydrogenase activity | 1 |
| carboxy-lyase activity | 1 |
| cation binding | 1 |
| adenyl nucleotide binding | 1 |
| catalytic activity | 1 |
| oxidoreductase activity, acting on CH-OH group of donors | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| mitochondrion | 1 |
| intracellular organelle lumen | 1 |
Protein interactions and networks
STRING
1742 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ME2 | JRK | O75564 | 825 |
| ME2 | LDHA | P00338 | 756 |
| ME2 | F13A1 | P00488 | 669 |
| ME2 | MDH2 | P40926 | 647 |
| ME2 | OPRM1 | P35372 | 634 |
| ME2 | PCK2 | Q16822 | 550 |
| ME2 | CS | O75390 | 549 |
| ME2 | CACNA1A | P78510 | 549 |
| ME2 | KCNQ3 | O43525 | 538 |
| ME2 | FH | P07954 | 534 |
| ME2 | H6PD | O95479 | 526 |
| ME2 | PGD | P52209 | 524 |
| ME2 | POGK | Q9P215 | 517 |
| ME2 | PC | P11498 | 511 |
| ME2 | RPEL1 | Q2QD12 | 496 |
IntAct
37 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HSPD1 | NUDT19 | psi-mi:“MI:0914”(association) | 0.710 |
| IFT25 | IFT56 | psi-mi:“MI:0914”(association) | 0.690 |
| GNAT3 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| SIRT4 | VWA8 | psi-mi:“MI:0914”(association) | 0.350 |
| HSCB | RBP5 | psi-mi:“MI:0914”(association) | 0.350 |
| LRRK2 | psi-mi:“MI:0914”(association) | 0.350 | |
| TMEM184A | NRDC | psi-mi:“MI:0914”(association) | 0.350 |
| KDM4C | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| MYLK | ACOT7 | psi-mi:“MI:0914”(association) | 0.350 |
| MAPT | SHTN1 | psi-mi:“MI:0914”(association) | 0.350 |
| CAPZB | ENAH | psi-mi:“MI:0914”(association) | 0.350 |
| GTPBP10 | psi-mi:“MI:0914”(association) | 0.350 | |
| VCP | SHTN1 | psi-mi:“MI:0914”(association) | 0.350 |
| VCP | FAM171A2 | psi-mi:“MI:0914”(association) | 0.350 |
| FECH | GTPBP10 | psi-mi:“MI:0914”(association) | 0.350 |
| DDX28 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| GAB2 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| MRPL49 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| USP46 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| EIF3F | psi-mi:“MI:0914”(association) | 0.350 | |
| MRPL58 | psi-mi:“MI:0914”(association) | 0.350 | |
| VWA8 | psi-mi:“MI:2364”(proximity) | 0.270 | |
| HSPD1 | VWA8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| MGST3 | VWA8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| PDK1 | VWA8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| TRMT61B | VWA8 | psi-mi:“MI:2364”(proximity) | 0.270 |
BioGRID (115): ME2 (Affinity Capture-MS), ME2 (Affinity Capture-MS), ME2 (Affinity Capture-MS), ME2 (Affinity Capture-RNA), ME2 (Affinity Capture-MS), ME2 (Proximity Label-MS), ME2 (Affinity Capture-MS), ME2 (Affinity Capture-MS), ME2 (Affinity Capture-MS), ME2 (Proximity Label-MS), ME2 (Proximity Label-MS), ME2 (Proximity Label-MS), ME2 (Proximity Label-MS), ME2 (Affinity Capture-MS), SHMT2 (Co-fractionation)
ESM2 similar proteins: A0A1D8PHA3, D5ANZ4, O13966, O14321, O31216, O59680, O74198, O94609, P07142, P07143, P08574, P0CY49, P16243, P19414, P20114, P22178, P23135, P23368, P25087, P27443, P30594, P30595, P36444, P37222, P51615, P54385, P81379, P87111, Q00988, Q02760, Q08822, Q11190, Q12166, Q12632, Q4QAU9, Q54D07, Q54KB7, Q54XM6, Q55C16, Q6BRB7
Diamond homologs: A0KHR8, A0KT69, A1JTY5, A1RNF8, A1S8W7, A3D0E1, A3QH80, A4SKE9, A4TKN8, A4WAJ3, A4Y3I1, A5F1Z0, A6V1V5, A6WSH0, A7FJK4, A7N025, A7ZLS1, A8AGN6, A8FZ49, A8GC31, A8H7G5, A9L2F4, A9MR05, A9MYU8, B0TRQ2, B1JPZ6, B1KFN0, B2JZJ5, B4ESY2, B4T5V6, B4TII8, B4TW15, B5F5W5, B5FHJ6, B5QTN6, B5RAB4, B5Z1T9, B7L7H9, B7UWK9, B8CQT6
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ME2 | “up-regulates quantity” | NADPH(4-) | “chemical modification” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
97 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 1 |
| Uncertain significance | 71 |
| Likely benign | 5 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 3390850 | NM_002396.5(ME2):c.1379_1380del (p.Phe460fs) | Likely pathogenic |
SpliceAI
0 predictions. Top by Δscore:
AlphaMissense
3814 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 18:50908088:G:C | R45P | 1.000 |
| 18:50920557:A:C | D279A | 1.000 |
| 18:50920557:A:T | D279V | 1.000 |
| 18:50895928:G:C | K36N | 0.999 |
| 18:50895928:G:T | K36N | 0.999 |
| 18:50908072:T:C | F40L | 0.999 |
| 18:50908074:T:A | F40L | 0.999 |
| 18:50908074:T:G | F40L | 0.999 |
| 18:50917426:A:T | K183I | 0.999 |
| 18:50920489:C:A | D256E | 0.999 |
| 18:50920489:C:G | D256E | 0.999 |
| 18:50920552:T:A | N277K | 0.999 |
| 18:50920552:T:G | N277K | 0.999 |
| 18:50920557:A:G | D279G | 0.999 |
| 18:50920558:T:A | D279E | 0.999 |
| 18:50920558:T:G | D279E | 0.999 |
| 18:50925847:T:A | N421K | 0.999 |
| 18:50925847:T:G | N421K | 0.999 |
| 18:50932344:T:A | N467K | 0.999 |
| 18:50932344:T:G | N467K | 0.999 |
| 18:50932354:T:C | F471L | 0.999 |
| 18:50932356:T:A | F471L | 0.999 |
| 18:50932356:T:G | F471L | 0.999 |
| 18:50908108:G:A | G52R | 0.998 |
| 18:50908108:G:C | G52R | 0.998 |
| 18:50908109:G:A | G52E | 0.998 |
| 18:50912857:T:C | L100P | 0.998 |
| 18:50917351:T:A | V158D | 0.998 |
| 18:50917422:G:A | G182R | 0.998 |
| 18:50917422:G:C | G182R | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000032741 (18:50942019 A>T), RS1000073826 (18:50940655 G>A,C), RS1000101839 (18:50933016 C>G), RS1000125627 (18:50943091 A>G), RS1000193565 (18:50910852 TC>T), RS1000218525 (18:50912977 T>C), RS1000255347 (18:50948763 C>T), RS1000264885 (18:50899809 T>A,G), RS1000355387 (18:50906285 T>G), RS1000359320 (18:50953927 T>C,G), RS1000371307 (18:50910546 G>A,T), RS1000405265 (18:50940282 C>G,T), RS1000427586 (18:50906459 C>G,T), RS1000547901 (18:50942254 C>G,T), RS1000550532 (18:50902046 A>G)
Disease associations
OMIM: gene MIM:154270 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| inborn disorder of energy metabolism | Limited | Autosomal recessive |
| Tourette syndrome | No Known Disease Relationship | Unknown |
Mondo (2): Tourette syndrome (MONDO:0007661), inborn disorder of energy metabolism (MONDO:0019243)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000894_5 | Entorhinal cortical thickness | 7.000000e-06 |
| GCST009086_3 | Pneumococcal meningitis | 8.000000e-08 |
| GCST009391_65 | Metabolite levels | 6.000000e-06 |
| GCST90002382_487 | Eosinophil percentage of white cells | 4.000000e-09 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004840 | cortical thickness |
| EFO:0010352 | diacylglycerol 34:1 measurement |
| EFO:0007991 | eosinophil percentage of leukocytes |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D005879 | Tourette Syndrome | C10.228.140.079.898; C10.228.662.825.800; C10.574.500.850; C16.320.400.820; F03.625.992.850 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5291602 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
31 potent at pChembl≥5 of 31 total, top 31 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.48 | Kd | 32.97 | nM | CHEMBL5653589 |
| 7.48 | ED50 | 32.97 | nM | CHEMBL5653589 |
| 6.82 | IC50 | 150 | nM | CHEMBL5279096 |
| 6.72 | IC50 | 190 | nM | CHEMBL5284469 |
| 6.70 | IC50 | 200 | nM | CHEMBL372408 |
| 6.70 | IC50 | 200 | nM | CHEMBL5267207 |
| 6.68 | IC50 | 210 | nM | CHEMBL5287773 |
| 6.66 | IC50 | 220 | nM | CHEMBL5278951 |
| 6.64 | IC50 | 230 | nM | CHEMBL5275653 |
| 6.57 | IC50 | 270 | nM | CHEMBL5289840 |
| 6.57 | IC50 | 270 | nM | CHEMBL5277536 |
| 6.46 | IC50 | 350 | nM | CHEMBL5284610 |
| 6.44 | IC50 | 360 | nM | CHEMBL5289950 |
| 6.41 | IC50 | 390 | nM | CHEMBL5279230 |
| 6.39 | IC50 | 410 | nM | CHEMBL5283020 |
| 6.38 | IC50 | 420 | nM | CHEMBL5218866 |
| 6.01 | IC50 | 980 | nM | CHEMBL5278596 |
| 5.96 | IC50 | 1110 | nM | CHEMBL5274945 |
| 5.89 | IC50 | 1290 | nM | CHEMBL5279589 |
| 5.86 | IC50 | 1370 | nM | CHEMBL5267542 |
| 5.80 | IC50 | 1590 | nM | CHEMBL5273550 |
| 5.79 | IC50 | 1630 | nM | CHEMBL5286488 |
| 5.78 | IC50 | 1660 | nM | CHEMBL5282439 |
| 5.77 | IC50 | 1700 | nM | CHEMBL5283717 |
| 5.76 | IC50 | 1720 | nM | CHEMBL5281297 |
| 5.71 | IC50 | 1970 | nM | CHEMBL5290463 |
| 5.60 | IC50 | 2500 | nM | CHEMBL5270965 |
| 5.58 | IC50 | 2600 | nM | CHEMBL5281258 |
| 5.55 | IC50 | 2800 | nM | CHEMBL5277143 |
| 5.55 | IC50 | 2800 | nM | CHEMBL5286064 |
| 5.41 | IC50 | 3900 | nM | CHEMBL5291081 |
PubChem BioAssay actives
30 with measured affinity, of 34 total; 30 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148740: Binding affinity to human ME2 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0330 | uM |
| 2-(4-chlorophenyl)-1-[4-(4-hydroxyphenyl)piperazin-1-yl]ethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.1500 | uM |
| 1-[4-(4-hydroxyphenyl)piperazin-1-yl]-2-phenylethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.1900 | uM |
| N-(2H-tetrazol-5-yl)-9,9a-dihydro-4aH-xanthene-9-carboxamide | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2000 | uM |
| 3-[4-(4-hydroxyphenyl)piperazin-1-yl]-1-phenylpyrrolidine-2,5-dione | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2000 | uM |
| 2-(4-fluorophenyl)-1-[4-(4-hydroxyphenyl)piperazin-1-yl]ethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2100 | uM |
| 4-(4-hydroxyphenyl)-N-phenylpiperazine-1-carboxamide | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2200 | uM |
| (E)-1-[4-(4-hydroxyphenyl)piperazin-1-yl]-3-phenylprop-2-en-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2300 | uM |
| 1-[4-(4-hydroxyphenyl)piperazin-1-yl]-3-methyl-3-phenylbutan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2700 | uM |
| 1-[4-(4-hydroxyphenyl)piperazin-1-yl]-3-phenylpropan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.2700 | uM |
| 3-(4-butoxyphenyl)-1-[4-(4-hydroxyphenyl)piperazin-1-yl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.3500 | uM |
| 2-[4-(4-hydroxyphenyl)piperazin-1-yl]-N-phenylacetamide | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.3600 | uM |
| 1-[4-(4-hydroxyphenyl)piperazin-1-yl]-2-phenoxyethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.3900 | uM |
| 1-[4-(4-hydroxyphenyl)piperazin-1-yl]-2-[4-(trifluoromethyl)phenyl]ethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.4100 | uM |
| 2,5-dihydroxy-3,6-bis(4-methoxyphenyl)cyclohexa-2,5-diene-1,4-dione | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.4200 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-2-phenylethanone | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 0.9800 | uM |
| 3-(4-fluorophenyl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-methylbutan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.1100 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-thiophen-2-ylpropan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.2900 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-methyl-3-phenylbutan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.3700 | uM |
| 3-(4-chlorophenyl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.5900 | uM |
| 3-(1-benzothiophen-2-yl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.6300 | uM |
| 3-(4-fluorophenyl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.6600 | uM |
| 2-phenyl-N-(2H-tetrazol-5-yl)quinoline-4-carboxamide | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.7000 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-phenylpropan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.7200 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-(5-phenylthiophen-2-yl)propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 1.9700 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-(4-methoxyphenyl)propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 2.5000 | uM |
| 1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-[4-(2-methoxyethoxy)phenyl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 2.6000 | uM |
| 3-(4-chlorophenyl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]-3-methylbutan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 2.8000 | uM |
| 3-[(3-carboxy-2-hydroxynaphthalen-1-yl)methyl]-2-hydroxynaphthalene-1-carboxylic acid | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 2.8000 | uM |
| 3-(4-butoxyphenyl)-1-[4-(5-hydroxy-2-pyridinyl)piperazin-1-yl]propan-1-one | 1922683: Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs without shaking by resorufin dye based fluorescence analysis | ic50 | 3.9000 | uM |
CTD chemical–gene interactions
55 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, affects expression | 4 |
| bisphenol A | decreases expression, increases expression | 2 |
| Acetaminophen | decreases expression, increases expression | 2 |
| Nickel | increases expression | 2 |
| Cyclosporine | increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| bufotalin | decreases expression | 1 |
| alpha-pinene | affects cotreatment, increases expression, increases abundance | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, increases expression | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| methotrexate polyglutamate | affects abundance | 1 |
| beta-lapachone | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases expression, increases abundance | 1 |
| beta-methylcholine | affects expression | 1 |
| deguelin | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| picoxystrobin | increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acrolein | affects cotreatment, increases expression, increases abundance | 1 |
| Air Pollutants | increases expression, affects cotreatment, increases abundance | 1 |
| Atrazine | increases expression | 1 |
| Vehicle Emissions | increases abundance, decreases expression | 1 |
ChEMBL screening assays
2 unique, capped per target: 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5225648 | Binding | Inhibition of His-tagged human recombinant full length ME2 using L-malate and beta-NAD+ as substrate preincubated with enzyme for 5 mins followed by beta-NAD+ challenge and incubated under shaking for 5 mins followed by incubation for 2 hrs | In the Quest for Potent and Selective Malic Enzyme 3 Inhibitors for the Treatment of Pancreatic Ductal Adenocarcinoma. — ACS Med Chem Lett |
Cellosaurus cell lines
5 cell lines: 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1NS | Abcam K-562 ME2 KO | Cancer cell line | Female |
| CVCL_D2KD | Abcam Raji ME2 KO | Cancer cell line | Male |
| CVCL_SX70 | HAP1 ME2 (-) 1 | Cancer cell line | Male |
| CVCL_UQ94 | Abcam Jurkat ME2 KO | Cancer cell line | Male |
| CVCL_XQ38 | HAP1 ME2 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
183 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00152750 | PHASE4 | UNKNOWN | Study of Clonidine on Sleep Architecture in Children With Tourette’s Syndrome (TS) and Comorbid ADHD |
| NCT00226824 | PHASE4 | TERMINATED | Safety Study of Galantamine in Tic Disorders |
| NCT00241176 | PHASE4 | COMPLETED | Open Label Trial of Aripiprazole in Children and Adolescents With Tourette’s Disorder |
| NCT00370838 | PHASE4 | COMPLETED | Comparison of Keppra and Clonidine in the Treatment of Tics |
| NCT01018056 | PHASE4 | COMPLETED | Developing New Treatments for Tourette Syndrome: Therapeutic Trials With Modulators of Glutamatergic Neurotransmission |
| NCT01547000 | PHASE4 | COMPLETED | Guanfacine in Children With Tic Disorders |
| NCT03239210 | PHASE4 | COMPLETED | Effects of Ondansetron in Obsessive-compulsive and Tic Disorders |
| NCT00004376 | PHASE3 | COMPLETED | Phase III Randomized, Double-Blind, Placebo-Controlled Study of Guanfacine for Tourette Syndrome and Attention Deficit Hyperactivity Disorder |
| NCT00206323 | PHASE3 | COMPLETED | A Randomized, Placebo-controlled, Tourette Syndrome Study. |
| NCT00206336 | PHASE3 | COMPLETED | An Open-label Study to Determine the Efficacy and Safety of Topiramate in the Treatment of Tourette Syndrome. |
| NCT00478842 | PHASE3 | COMPLETED | Pallidal Stimulation and Gilles de la Tourette Syndrome |
| NCT00681863 | PHASE3 | TERMINATED | Open-label Extension Study of Pramipexole in the Treatment of Children and Adolescents With Tourette Syndrome |
| NCT01501695 | PHASE3 | COMPLETED | Phase III Study of 5LGr to Treat Tic Disorder |
| NCT03087201 | PHASE3 | COMPLETED | CANNAbinoids in the Treatment of TICS (CANNA-TICS) |
| NCT03487783 | PHASE3 | COMPLETED | Aripiprazole Oral Solution in the Treatment of Children and Adolescents With Tourette’s Syndrome |
| NCT03567291 | PHASE3 | TERMINATED | Evaluation of Safety and Tolerability of Long-term TEV-50717 (Deutetrabenazine) for Treatment of Tourette Syndrome in Children and Adolescents |
| NCT03571256 | PHASE3 | COMPLETED | A Study to Test if TEV-50717 is Effective in Relieving Tics Associated With Tourette Syndrome (TS) |
| NCT06021522 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study to Evaluate Long-term Safety of Ecopipam Tablets in Children, Adolescents and Adults With Tourette’s Disorder |
| NCT00004393 | PHASE2 | COMPLETED | Phase II Double Blind Placebo Controlled Trial of Risperidone in Tourette Syndrome |
| NCT00004652 | PHASE2 | COMPLETED | Phase II Pilot Controlled Study of Short Vs Longer Term Pimozide (Orap) Therapy in Tourette Syndrome |
| NCT00231985 | PHASE2 | COMPLETED | Effectiveness of Behavior Therapy and Psychosocial Therapy for the Treatment of Tourette Syndrome and Chronic Tic Disorder |
| NCT00311909 | PHASE2 | COMPLETED | Thalamic Deep Brain Stimulation for Tourette Syndrome |
| NCT00529308 | PHASE2 | COMPLETED | Transcranial Magnetic Stimulation (TMS) for Individuals With Tourette’s Syndrome |
| NCT00558467 | PHASE2 | COMPLETED | Pramipexole Pilot Phase II Study in Children and Adolescents With Tourette Disorder According to DSM-IV Criteria |
| NCT01043549 | PHASE2 | TERMINATED | Repetitive Transcranial Magnetic Stimulation of the Posterior Parietal Cortex in Patients Suffering From Gilles de la Tourette Syndrome |
| NCT01133353 | PHASE2 | WITHDRAWN | A Study of the Effectiveness and Safety of Tetrabenazine MR in Pediatric Subjects With Tourette’s Syndrome |
| NCT01475383 | PHASE2 | WITHDRAWN | Study Evaluating The Safety And Efficacy Of PF-03654746 In Adult Subjects With Tourette’s Syndrome |
| NCT01647269 | PHASE2 | COMPLETED | A Trial of Bilateral Deep Brain Stimulation to the Globus Pallidus Internum in Tourette Syndrome |
| NCT01904773 | PHASE2 | COMPLETED | Safety, Tolerability, Pharmacokinetic, and Efficacy Study of AZD5213 in Adolescents With Tourette’s Disorder |
| NCT02102698 | PHASE2 | COMPLETED | Ecopipam Treatment of Tourette’s Syndrome in Subjects 7-17 Years |
| NCT02217007 | PHASE2 | WITHDRAWN | A Trial Evaluating the Efficacy, Safety, and Pharmacokinetics of SNC-102 in Subjects With Tourette Syndrome |
| NCT02247206 | PHASE2 | COMPLETED | VoIP Delivered Behavior Therapy for Tourette Syndrome |
| NCT02581865 | PHASE2 | COMPLETED | Safety and Efficacy Study of NBI-98854 in Adults With Tourette Syndrome |
| NCT02619084 | PHASE2 | COMPLETED | Subthalamic Stimulation in Tourette’s Syndrome |
| NCT02679079 | PHASE2 | COMPLETED | Safety and Efficacy Study of NBI-98854 in Children and Adolescents With Tourette Syndrome |
| NCT02879578 | PHASE2 | COMPLETED | Safety and Tolerability Study of NBI-98854 for the Treatment of Subjects With Tourette Syndrome |
| NCT03066193 | PHASE2 | COMPLETED | Efficacy of a Therapeutic Combination of Dronabinol and PEA for Tourette Syndrome |
| NCT03247244 | PHASE2 | TERMINATED | Safety and Efficacy of Cannabis in Tourette Syndrome |
| NCT03325010 | PHASE2 | COMPLETED | Safety, Tolerability, and Efficacy of NBI-98854 for the Treatment of Pediatric Subjects With Tourette Syndrome |
| NCT03444038 | PHASE2 | COMPLETED | Open-Label Safety and Tolerability Study of NBI-98854 for the Treatment of Pediatric Subjects With Tourette Syndrome |
Related Atlas pages
- Associated diseases: Tourette syndrome, inborn disorder of energy metabolism
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): inborn disorder of energy metabolism, pneumococcal meningitis