MEAK7
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Also known as mEAK-7
Summary
MEAK7 (MTOR associated protein MEAK7, HGNC:29325) is a protein-coding gene on chromosome 16q24.1, encoding MTOR-associated protein MEAK7 (Q6P9B6). Activates an alternative mTOR signaling through RPS6KB2 activation and EIF4EBP1 repression to regulate cell proliferation and migration.
Involved in several processes, including TOR signaling; positive regulation of protein localization to lysosome; and response to insulin. Located in cytosol; lysosomal membrane; and nuclear lumen.
Source: NCBI Gene 57707 — RefSeq curated summary.
At a glance
- GWAS associations: 22
- Clinical variants (ClinVar): 157 total
- MANE Select transcript:
NM_020947
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29325 |
| Approved symbol | MEAK7 |
| Name | MTOR associated protein MEAK7 |
| Location | 16q24.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | mEAK-7 |
| Ensembl gene | ENSG00000140950 |
| Ensembl biotype | protein_coding |
| OMIM | 619331 |
| Entrez | 57707 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 21 protein_coding, 2 retained_intron, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000343629, ENST00000561807, ENST00000562447, ENST00000565079, ENST00000565701, ENST00000565765, ENST00000566995, ENST00000567321, ENST00000570036, ENST00000899776, ENST00000899777, ENST00000899778, ENST00000899779, ENST00000899780, ENST00000899781, ENST00000899782, ENST00000926571, ENST00000926572, ENST00000926573, ENST00000926574, ENST00000926575, ENST00000926576, ENST00000971298, ENST00000971299, ENST00000971300, ENST00000971301
RefSeq mRNA: 1 — MANE Select: NM_020947
NM_020947
CCDS: CCDS32498
Canonical transcript exons
ENST00000343629 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001293118 | 84476355 | 84480026 |
| ENSE00001514665 | 84504601 | 84504659 |
| ENSE00003486363 | 84486631 | 84487059 |
| ENSE00003535735 | 84482592 | 84482710 |
| ENSE00003627415 | 84489278 | 84489422 |
| ENSE00003642406 | 84495683 | 84495913 |
| ENSE00003690700 | 84480529 | 84480708 |
| ENSE00003692895 | 84497934 | 84498111 |
Expression profiles
Bgee: expression breadth ubiquitous, 218 present calls, max score 93.28.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 8.1021 / max 88.3843, expressed in 1722 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 158348 | 7.9218 | 1718 |
| 158347 | 0.0935 | 28 |
| 158350 | 0.0588 | 32 |
| 158349 | 0.0280 | 21 |
Top tissues by expression
274 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cervix squamous epithelium | UBERON:0006922 | 93.28 | silver quality |
| gingival epithelium | UBERON:0001949 | 86.54 | gold quality |
| squamous epithelium | UBERON:0006914 | 86.47 | gold quality |
| esophagus mucosa | UBERON:0002469 | 86.14 | gold quality |
| stromal cell of endometrium | CL:0002255 | 85.63 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 84.87 | gold quality |
| endothelial cell | CL:0000115 | 84.48 | silver quality |
| gingiva | UBERON:0001828 | 83.63 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 83.00 | gold quality |
| placenta | UBERON:0001987 | 82.46 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 82.35 | gold quality |
| tibia | UBERON:0000979 | 81.74 | gold quality |
| esophagus | UBERON:0001043 | 81.50 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 81.44 | silver quality |
| islet of Langerhans | UBERON:0000006 | 81.36 | gold quality |
| vagina | UBERON:0000996 | 80.88 | gold quality |
| secondary oocyte | CL:0000655 | 80.68 | gold quality |
| cortical plate | UBERON:0005343 | 80.68 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 79.79 | gold quality |
| uterine cervix | UBERON:0000002 | 79.65 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 79.51 | gold quality |
| pancreatic ductal cell | CL:0002079 | 79.23 | gold quality |
| gall bladder | UBERON:0002110 | 79.16 | gold quality |
| ganglionic eminence | UBERON:0004023 | 78.93 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 78.75 | gold quality |
| parietal pleura | UBERON:0002400 | 78.67 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 78.65 | gold quality |
| colonic epithelium | UBERON:0000397 | 78.45 | gold quality |
| calcaneal tendon | UBERON:0003701 | 78.41 | gold quality |
| oviduct epithelium | UBERON:0004804 | 78.37 | silver quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.72 |
| E-MTAB-7303 | no | 702.31 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
102 targeting MEAK7, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-4789-5P | 99.98 | 70.76 | 2721 |
| HSA-MIR-4666A-3P | 99.96 | 71.71 | 3434 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-9983-3P | 99.94 | 71.48 | 3631 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-4648 | 99.91 | 67.00 | 710 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-4302 | 99.89 | 67.94 | 1187 |
| HSA-MIR-129-5P | 99.88 | 70.26 | 3273 |
| HSA-MIR-579-3P | 99.86 | 71.66 | 3628 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-202-3P | 99.84 | 71.41 | 1290 |
| HSA-MIR-6079 | 99.84 | 68.54 | 1170 |
| HSA-MIR-664B-3P | 99.84 | 71.65 | 3590 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-4799-5P | 99.82 | 70.60 | 2663 |
| HSA-MIR-3133 | 99.81 | 70.92 | 3506 |
| HSA-MIR-374C-5P | 99.80 | 72.06 | 2910 |
| HSA-MIR-655-3P | 99.80 | 72.19 | 2909 |
| HSA-MIR-4668-5P | 99.79 | 70.58 | 3782 |
| HSA-MIR-548AJ-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548F-5P | 99.78 | 71.02 | 3093 |
| HSA-MIR-548G-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548X-5P | 99.78 | 71.12 | 3085 |
Literature-anchored findings (GeneRIF, showing 3)
- miR325p suppresses the proliferation and migration of pancreatic adenocarcinoma cells by targeting TLDC1. (PMID:34468015)
- Molecular basis of mEAK7-mediated human V-ATPase regulation. (PMID:35672408)
- Identification of mEAK-7 as a human V-ATPase regulator via cryo-EM data mining. (PMID:35994636)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | meak7 | ENSDARG00000062951 |
| mus_musculus | Meak7 | ENSMUSG00000034105 |
| rattus_norvegicus | Meak7 | ENSRNOG00000016224 |
| drosophila_melanogaster | CG5149 | FBGN0031904 |
| caenorhabditis_elegans | WBGENE00010671 |
Paralogs (3): TLDC2 (ENSG00000101342), NCOA7 (ENSG00000111912), OXR1 (ENSG00000164830)
Protein
Protein identifiers
MTOR-associated protein MEAK7 — Q6P9B6 (reviewed: Q6P9B6)
Alternative names: MTOR associated protein, eak-7 homolog, TBC/LysM-associated domain-containing protein 1, TLD domain-containing protein 1
All UniProt accessions (6): Q6P9B6, H3BM75, H3BPI4, H3BQ13, H3BTC5, H3BUB0
UniProt curated annotations — full annotation on UniProt →
Function. Activates an alternative mTOR signaling through RPS6KB2 activation and EIF4EBP1 repression to regulate cell proliferation and migration. Recruits MTOR at the lysosome, essential for MTOR signaling at the lysosome.
Subunit / interactions. Interacts (via C-terminal domain) with MTOR and MLST8; the interaction with MTOR increases upon nutrient stimulation.
Subcellular location. Membrane. Cytoplasm. Lysosome.
Induction. Addition of nutrients and insulin induces its expression (at protein level).
RefSeq proteins (1): NP_065998* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006571 | TLDc_dom | Domain |
Pfam: PF07534
UniProt features (12 total): sequence variant 7, initiator methionine 1, chain 1, mutagenesis site 1, domain 1, lipid moiety-binding region 1
Structure
Experimental structures (PDB)
3 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7U4T | ELECTRON MICROSCOPY | 3.6 |
| 7UNE | ELECTRON MICROSCOPY | 3.73 |
| 7UNF | ELECTRON MICROSCOPY | 4.08 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6P9B6-F1 | 86.73 | 0.71 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 2
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 2 | abolishes lysosomal location. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 156 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, GOBP_RESPONSE_TO_ACID_CHEMICAL, GOCC_VACUOLAR_MEMBRANE, GOBP_POSITIVE_REGULATION_OF_PROTEIN_LOCALIZATION, MODULE_453, GOBP_NEGATIVE_REGULATION_OF_RESPONSE_TO_OXIDATIVE_STRESS, GOBP_PROTEIN_LOCALIZATION_TO_LYSOSOME, TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_ERYTHROCYTE_UP, MODULE_205, RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_DN, KESHELAVA_MULTIPLE_DRUG_RESISTANCE, GOBP_RESPONSE_TO_INSULIN, GOBP_PROTEIN_LOCALIZATION_TO_VACUOLE, FISCHER_G2_M_CELL_CYCLE
GO Biological Process (9): response to oxidative stress (GO:0006979), regulation of cell migration (GO:0030334), response to nutrient levels (GO:0031667), TOR signaling (GO:0031929), response to insulin (GO:0032868), regulation of cell population proliferation (GO:0042127), response to amino acid (GO:0043200), positive regulation of protein localization to lysosome (GO:0150032), negative regulation of cellular response to oxidative stress (GO:1900408)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (8): nucleus (GO:0005634), nucleoplasm (GO:0005654), nucleolus (GO:0005730), cytoplasm (GO:0005737), lysosomal membrane (GO:0005765), cytosol (GO:0005829), membrane (GO:0016020), lysosome (GO:0005764)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| nuclear lumen | 2 |
| response to stress | 1 |
| cell migration | 1 |
| regulation of cell motility | 1 |
| response to stimulus | 1 |
| intracellular signal transduction | 1 |
| response to peptide hormone | 1 |
| cell population proliferation | 1 |
| regulation of cellular process | 1 |
| response to acid chemical | 1 |
| protein localization to lysosome | 1 |
| regulation of protein localization to lysosome | 1 |
| positive regulation of protein localization | 1 |
| cellular response to oxidative stress | 1 |
| negative regulation of cellular process | 1 |
| regulation of cellular response to oxidative stress | 1 |
| negative regulation of response to oxidative stress | 1 |
| binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
| lysosome | 1 |
| lytic vacuole membrane | 1 |
| cytoplasm | 1 |
| lytic vacuole | 1 |
Protein interactions and networks
STRING
404 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MEAK7 | CCDC182 | A6NF36 | 496 |
| MEAK7 | GOLGA7B | Q2TAP0 | 491 |
| MEAK7 | DHX32 | Q7L7V1 | 488 |
| MEAK7 | RWDD2A | Q9UIY3 | 466 |
| MEAK7 | TDRKH | Q9Y2W6 | 456 |
| MEAK7 | ARHGAP22 | Q7Z5H3 | 449 |
| MEAK7 | ART3 | Q13508 | 447 |
| MEAK7 | STK36 | Q9NRP7 | 446 |
| MEAK7 | MXRA8 | Q9BRK3 | 443 |
| MEAK7 | RNASEK | Q6P5S7 | 440 |
| MEAK7 | TBC1D24 | Q9ULP9 | 434 |
| MEAK7 | C22orf39 | Q6P5X5 | 433 |
| MEAK7 | DHX37 | Q8IY37 | 430 |
| MEAK7 | CCDC85C | A6NKD9 | 421 |
| MEAK7 | AGFG1 | P52594 | 408 |
IntAct
25 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MEAK7 | TRIP13 | psi-mi:“MI:0915”(physical association) | 0.710 |
| TRIP13 | MEAK7 | psi-mi:“MI:0915”(physical association) | 0.710 |
| MEAK7 | NMT2 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC31A1 | C2orf72 | psi-mi:“MI:0914”(association) | 0.530 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| AGPS | psi-mi:“MI:0915”(physical association) | 0.400 | |
| TK2 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| GPC1 | SNAP23 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GPC1 | GANAB | psi-mi:“MI:0915”(physical association) | 0.400 |
| SHARPIN | MAP3K7 | psi-mi:“MI:0914”(association) | 0.350 |
| TANK | CNOT1 | psi-mi:“MI:0914”(association) | 0.350 |
| TNIP2 | TMEM178B | psi-mi:“MI:0914”(association) | 0.350 |
| SHTN1 | psi-mi:“MI:0914”(association) | 0.350 | |
| TMEM223 | psi-mi:“MI:0914”(association) | 0.350 | |
| ARRDC5 | PLPP1 | psi-mi:“MI:0914”(association) | 0.350 |
| CERS2 | VPS37C | psi-mi:“MI:0914”(association) | 0.350 |
| DDX28 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| KRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.270 |
| HRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.270 |
BioGRID (55): TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), TLDC1 (Two-hybrid), GMFB (Co-fractionation), TLDC1 (Co-fractionation), TLDC1 (Affinity Capture-MS), TLDC1 (Affinity Capture-MS), NMT1 (Affinity Capture-MS), NMT2 (Affinity Capture-MS), ATP6V0A1 (Affinity Capture-MS), TLDC1 (Affinity Capture-RNA)
ESM2 similar proteins: A2VE39, B1H268, D2HRF1, E1BSI0, F1MX48, O00763, O14730, O54935, O88554, O95801, P26446, P42898, P47897, Q1RMT7, Q28DH9, Q2KIJ6, Q2YD98, Q3MHH4, Q3ULW8, Q4V7A9, Q5I598, Q5R981, Q5RHR0, Q5U2Q4, Q5U2Z5, Q60596, Q66H61, Q6DDX8, Q6MG55, Q6P9B6, Q7TMM8, Q810A5, Q8BML9, Q8K0P3, Q8N1G2, Q8N5Y8, Q8N6R0, Q91WR3, Q99PL6, Q9CZT4
Diamond homologs: A0PJX2, A2ACG1, A5PKL1, A8KBE0, B4F6Q9, O14284, Q08952, Q0IID2, Q1LWV7, Q3UUG6, Q4KMM3, Q4V8B0, Q5ZJX5, Q5ZMS4, Q6C443, Q6CMK8, Q6DDZ9, Q6DFV7, Q6FSN5, Q6P9B6, Q755A3, Q874Z5, Q8K0P3, Q8N573, Q8NI08, Q9ULP9, Q9VIH7, P0CP42, P0CP43, Q6ZZF5, Q7S4P1, A1A5K6, Q29RJ2
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
157 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 120 |
| Likely benign | 11 |
| Benign | 8 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2211 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:84479883:T:TA | donor_gain | 1.0000 |
| 16:84479932:T:TA | donor_gain | 1.0000 |
| 16:84479933:C:A | donor_gain | 1.0000 |
| 16:84480365:T:TA | donor_gain | 1.0000 |
| 16:84482590:A:AC | donor_gain | 1.0000 |
| 16:84482591:C:CC | donor_gain | 1.0000 |
| 16:84482722:C:CT | acceptor_gain | 1.0000 |
| 16:84482722:C:T | acceptor_gain | 1.0000 |
| 16:84495914:C:CC | acceptor_gain | 1.0000 |
| 16:84495918:C:CT | acceptor_gain | 1.0000 |
| 16:84497926:A:AC | donor_gain | 1.0000 |
| 16:84497927:C:CC | donor_gain | 1.0000 |
| 16:84497927:CT:C | donor_gain | 1.0000 |
| 16:84497986:T:C | donor_gain | 1.0000 |
| 16:84498108:TTCT:T | acceptor_gain | 1.0000 |
| 16:84498110:CT:C | acceptor_gain | 1.0000 |
| 16:84504596:CCTA:C | donor_loss | 1.0000 |
| 16:84504597:CTA:C | donor_loss | 1.0000 |
| 16:84504598:TA:T | donor_loss | 1.0000 |
| 16:84504599:AC:A | donor_gain | 1.0000 |
| 16:84504600:CC:C | donor_gain | 1.0000 |
| 16:84504600:CCCTG:C | donor_gain | 1.0000 |
| 16:84480028:T:C | acceptor_gain | 0.9900 |
| 16:84480336:TAAAC:T | donor_gain | 0.9900 |
| 16:84480528:CCAA:C | donor_gain | 0.9900 |
| 16:84482585:GGCT:G | donor_loss | 0.9900 |
| 16:84482586:GCT:G | donor_loss | 0.9900 |
| 16:84482587:CTC:C | donor_loss | 0.9900 |
| 16:84482589:C:CG | donor_loss | 0.9900 |
| 16:84482590:A:C | donor_loss | 0.9900 |
AlphaMissense
3020 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:84486635:A:C | F318L | 0.997 |
| 16:84486635:A:T | F318L | 0.997 |
| 16:84486637:A:G | F318L | 0.997 |
| 16:84486655:A:G | W312R | 0.997 |
| 16:84486655:A:T | W312R | 0.997 |
| 16:84480643:G:C | S381R | 0.996 |
| 16:84480643:G:T | S381R | 0.996 |
| 16:84480645:T:G | S381R | 0.996 |
| 16:84480561:A:G | W409R | 0.995 |
| 16:84480561:A:T | W409R | 0.995 |
| 16:84480610:G:C | S392R | 0.994 |
| 16:84480610:G:T | S392R | 0.994 |
| 16:84480612:T:G | S392R | 0.994 |
| 16:84480625:G:C | C387W | 0.993 |
| 16:84480682:A:C | F368L | 0.993 |
| 16:84480682:A:T | F368L | 0.993 |
| 16:84480684:A:G | F368L | 0.993 |
| 16:84486677:G:C | F304L | 0.993 |
| 16:84486677:G:T | F304L | 0.993 |
| 16:84486679:A:G | F304L | 0.993 |
| 16:84486779:A:C | F270L | 0.993 |
| 16:84486779:A:T | F270L | 0.993 |
| 16:84486781:A:G | F270L | 0.993 |
| 16:84480618:A:C | Y390D | 0.992 |
| 16:84480675:A:G | W371R | 0.992 |
| 16:84480675:A:T | W371R | 0.992 |
| 16:84480702:C:A | G362W | 0.992 |
| 16:84480559:C:A | W409C | 0.991 |
| 16:84480559:C:G | W409C | 0.991 |
| 16:84480701:C:T | G362E | 0.991 |
dbSNP variants (sampled 300 via entrez): RS1000054319 (16:84503292 G>A), RS1000130190 (16:84497657 A>C), RS1000185260 (16:84506222 T>C), RS1000239932 (16:84482439 A>C,G), RS1000273711 (16:84484117 G>A,C,T), RS1000477498 (16:84493831 G>A,C), RS1000593301 (16:84493619 C>T), RS1000619632 (16:84487593 G>A,C), RS1000834140 (16:84477444 G>T), RS1000890209 (16:84504366 G>T), RS1000952091 (16:84500740 G>A), RS1000955332 (16:84504169 T>C), RS1000955826 (16:84480327 C>A,T), RS1001091617 (16:84480139 G>C,T), RS1001113508 (16:84483423 G>T)
Disease associations
OMIM: gene MIM:619331 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
22 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003876_12 | Gut microbiota (beta diversity) | 5.000000e-08 |
| GCST004610_147 | White blood cell count | 4.000000e-25 |
| GCST004613_48 | Sum neutrophil eosinophil counts | 5.000000e-12 |
| GCST004614_25 | Granulocyte count | 3.000000e-12 |
| GCST004620_96 | Sum basophil neutrophil counts | 8.000000e-12 |
| GCST004625_158 | Monocyte count | 1.000000e-16 |
| GCST004626_136 | Myeloid white cell count | 1.000000e-13 |
| GCST004627_162 | Lymphocyte count | 2.000000e-23 |
| GCST004629_146 | Neutrophil count | 1.000000e-11 |
| GCST005652_8 | Cleft lip with or without cleft palate (maternal periconceptional vitamin use interaction) | 6.000000e-06 |
| GCST006976_101 | Macular thickness | 2.000000e-13 |
| GCST008399_6 | Cocaine dependence | 9.000000e-06 |
| GCST009391_342 | Metabolite levels | 6.000000e-06 |
| GCST90002379_177 | Basophil count | 1.000000e-10 |
| GCST90002388_174 | Lymphocyte count | 6.000000e-46 |
| GCST90002391_80 | Mean corpuscular hemoglobin concentration | 3.000000e-12 |
| GCST90002393_274 | Monocyte count | 2.000000e-37 |
| GCST90002395_227 | Mean platelet volume | 4.000000e-14 |
| GCST90002397_250 | Mean spheric corpuscular volume | 5.000000e-21 |
| GCST90002398_302 | Neutrophil count | 7.000000e-13 |
| GCST90002400_185 | Plateletcrit | 2.000000e-12 |
| GCST90002407_561 | White blood cell count | 2.000000e-37 |
EFO canonical traits (12, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007874 | gut microbiome measurement |
| EFO:0004833 | neutrophil count |
| EFO:0004842 | eosinophil count |
| EFO:0007987 | granulocyte count |
| EFO:0005090 | basophil count |
| EFO:0005091 | monocyte count |
| EFO:0004587 | lymphocyte count |
| EFO:0003959 | cleft lip |
| EFO:0009116 | vitamin supplement exposure measurement |
| EFO:0010433 | triacylglycerol 56:6 measurement |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0007985 | platelet crit |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
20 total (human), top 20 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, increases expression | 3 |
| FR900359 | increases phosphorylation | 1 |
| pyrogallol 1,3-dimethyl ether | increases expression, affects cotreatment, affects localization | 1 |
| sodium arsenite | decreases expression | 1 |
| potassium chromate(VI) | increases expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| jinfukang | increases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Leflunomide | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation, decreases methylation | 1 |
| Enzyme Inhibitors | decreases activity, increases O-linked glycosylation | 1 |
| Furaldehyde | affects cotreatment, affects localization, decreases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Methotrexate | decreases expression | 1 |
| Progesterone | increases expression | 1 |
| Silicon Dioxide | increases expression | 1 |
| Smoke | increases expression | 1 |
| Sodium Chloride | affects cotreatment, affects localization, decreases expression, increases expression | 1 |
| Thimerosal | decreases expression | 1 |
| Tobacco Smoke Pollution | affects expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cocaine dependence