MEFV
geneOn this page
Also known as FMFTRIM20
Summary
MEFV (MEFV innate immunity regulator, pyrin, HGNC:6998) is a protein-coding gene on chromosome 16p13.3, encoding Pyrin (O15553). Involved in the regulation of innate immunity and the inflammatory response in response to IFNG/IFN-gamma.
This gene encodes a protein, also known as pyrin or marenostrin, that is an important modulator of innate immunity. Mutations in this gene are associated with Mediterranean fever, a hereditary periodic fever syndrome.
Source: NCBI Gene 4210 — RefSeq curated summary.
At a glance
- Gene–disease (curated): familial Mediterranean fever (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 1
- Clinical variants (ClinVar): 1,113 total — 5 pathogenic, 6 likely-pathogenic
- Phenotypes (HPO): 164
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency no evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_000243
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6998 |
| Approved symbol | MEFV |
| Name | MEFV innate immunity regulator, pyrin |
| Location | 16p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FMF, TRIM20 |
| Ensembl gene | ENSG00000103313 |
| Ensembl biotype | protein_coding |
| OMIM | 608107 |
| Entrez | 4210 |
Gene structure
Transcript identifiers
Ensembl transcripts: 16 — 9 nonsense_mediated_decay, 5 protein_coding, 2 retained_intron
ENST00000219596, ENST00000339854, ENST00000536379, ENST00000536980, ENST00000537682, ENST00000538326, ENST00000539145, ENST00000539154, ENST00000541159, ENST00000542898, ENST00000570511, ENST00000572244, ENST00000574583, ENST00000576315, ENST00000697124, ENST00000956137
RefSeq mRNA: 2 — MANE Select: NM_000243
NM_000243, NM_001198536
CCDS: CCDS10498, CCDS55981
Canonical transcript exons
ENST00000219596 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000666508 | 3248909 | 3249004 |
| ENSE00001160048 | 3249431 | 3249780 |
| ENSE00001160054 | 3254158 | 3254790 |
| ENSE00003459661 | 3244254 | 3244286 |
| ENSE00003570135 | 3244473 | 3244588 |
| ENSE00003588551 | 3247016 | 3247246 |
| ENSE00003594628 | 3246525 | 3246547 |
| ENSE00003634440 | 3243860 | 3243892 |
| ENSE00003900481 | 3242027 | 3243694 |
| ENSE00003902985 | 3256311 | 3256633 |
Expression profiles
Bgee: expression breadth ubiquitous, 153 present calls, max score 98.75.
FANTOM5 (CAGE): breadth broad, TPM avg 10.3980 / max 679.2045, expressed in 302 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 156019 | 10.3980 | 302 |
Top tissues by expression
275 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| buccal mucosa cell | CL:0002336 | 98.75 | gold quality |
| monocyte | CL:0000576 | 96.17 | gold quality |
| mononuclear cell | CL:0000842 | 95.04 | gold quality |
| leukocyte | CL:0000738 | 95.00 | gold quality |
| granulocyte | CL:0000094 | 92.63 | gold quality |
| blood | UBERON:0000178 | 88.93 | gold quality |
| diaphragm | UBERON:0001103 | 87.87 | gold quality |
| olfactory bulb | UBERON:0002264 | 86.94 | gold quality |
| bone marrow cell | CL:0002092 | 83.59 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 82.33 | silver quality |
| type B pancreatic cell | CL:0000169 | 81.96 | gold quality |
| spleen | UBERON:0002106 | 79.16 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 77.08 | gold quality |
| vermiform appendix | UBERON:0001154 | 74.41 | gold quality |
| right lung | UBERON:0002167 | 74.30 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 73.99 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 73.17 | silver quality |
| upper lobe of lung | UBERON:0008948 | 71.48 | gold quality |
| caecum | UBERON:0001153 | 71.24 | gold quality |
| medial globus pallidus | UBERON:0002477 | 69.58 | gold quality |
| oocyte | CL:0000023 | 68.97 | gold quality |
| oviduct epithelium | UBERON:0004804 | 67.61 | silver quality |
| hair follicle | UBERON:0002073 | 66.54 | gold quality |
| periodontal ligament | UBERON:0008266 | 66.00 | silver quality |
| globus pallidus | UBERON:0001875 | 65.85 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 65.08 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 64.63 | gold quality |
| vastus lateralis | UBERON:0001379 | 64.48 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 64.45 | gold quality |
| secondary oocyte | CL:0000655 | 64.12 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 7.29 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CEBPB, E2F1, ELF4, SP1, TP53
miRNA regulators (miRDB)
61 targeting MEFV, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-574-5P | 100.00 | 66.01 | 989 |
| HSA-MIR-5193 | 100.00 | 67.26 | 1744 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-381-3P | 99.93 | 71.87 | 2854 |
| HSA-MIR-300 | 99.92 | 71.76 | 2856 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-7162-3P | 99.89 | 68.16 | 1682 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-1273H-5P | 99.77 | 66.32 | 2471 |
| HSA-MIR-4658 | 99.77 | 64.94 | 514 |
| HSA-MIR-6790-5P | 99.77 | 65.24 | 505 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-30B-3P | 99.70 | 65.76 | 2325 |
| HSA-MIR-3689A-3P | 99.70 | 65.73 | 2306 |
| HSA-MIR-3689B-3P | 99.70 | 65.71 | 2311 |
| HSA-MIR-3689C | 99.70 | 65.71 | 2311 |
| HSA-MIR-6779-5P | 99.70 | 65.76 | 2363 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-6848-3P | 99.64 | 66.49 | 885 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4649-3P | 99.56 | 66.90 | 1783 |
| HSA-MIR-7106-5P | 99.53 | 67.47 | 3574 |
Functional genomics
ClinGen dosage: haploinsufficiency 0 (no evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- mutational spectrum in the genes in patients suffering from AA amyloidosis and recurrent inflammatory attacks (PMID:12105243)
- The effects of I591T mutation imply possibly a mild mutation, benign polymorphism, or a variant influenced by another modifier. (PMID:12124996)
- MEFV message levels are related to both the genotype and the phenotype, and suggest that the pathophysiology of FMF relies on a quantitative defect of MEFV mRNA expression. (PMID:12384939)
- In phenotype II amyloidosis patients, the distribution of the four common MEFV mutations was not significantly different from that found in all FMF patients with typical symptoms who do or do not develop amyloidosis. (PMID:12401847)
- penetrance of paired recognised pathogenic MEFV mutations may frequently be incomplete (PMID:12461684)
- there is a cryopyrin signaling pathway activated through the induced proximity of ASC, which is negatively regulated by pyrin (PMID:12615073)
- Disease severity and the development of amyloidosis in failial Mediterranean Fever are differentially affected by genetic variations within and outside the MEFV gene. (PMID:12687559)
- In 412 FMF patients genotyped for MEFV mutations, M694V/M694V was the most common genotype (27%), followed by M694V/V726A (16%). The full genotype could be assessed in 57% of the patients, and one disease-causing mutation in an additional 26%. (PMID:12929299)
- Pyrin binds the PSTPIP1/CD2BP1 protein (PMID:14595024)
- S1791 was in compound heterozygosity with MEFV mutation M694V (PMID:14636645)
- cellular location of mutant isoforms, in the presence or absence of ASC protein (PMID:14985395)
- MEFV mutations are not associated with Crohn Disease susceptibility, yet the presence of these mutations appears to be associated with a stricturing disease pattern and extraintestinal disease manifestations of Crohn Disease. (PMID:15667491)
- E148Q mutation is significantly frequent in familial Mediterranean fever (PMID:15717684)
- In Egyptian familial Mediterranean fever patients, the M694V mutation was detected in 20 patients (100%) and V726A mutation in 17 patients (85%). (PMID:15724392)
- FMF is caused by mutations in the MEFV gene that encodes pyrin/marenostrin. (PMID:15805719)
- The occurrence of frequent MEFV mutations in BD patients suggests that the MEFV gene is involved in the pathogenesis of Behcet’s disease. (PMID:15903027)
- data suggest that both pyrin and cryopyrin are capable of assembling independent inflammasome complexes with ASC and procaspase-1, and activating caspase-1 via ASC oligomerization (PMID:16037825)
- Our results indicate a relationship between some HLA-DR/DQ alleles and MEFV mutations in Mediterranean fever patients. (PMID:16245224)
- MEFV protein mutations are associated with Familial Mediterranean fever (PMID:16378925)
- Carrying the proinflammatory M694V pyrin allele increases the risk for myocardial infarction. Conversely, the wild-type pyrin genotype leads to longevity in a modern environment with reduced pathogen load and improved infection control. (PMID:16387839)
- The gene coding the disease (MEFV) is identified on the 16th chromosome. The most common MEFV mutations are M694V, M680I, V726A and M694I located on exon 10 and E148Q located on exon 2. (PMID:16523434)
- MEFV protein mutations are associated with Familial Mediterranean fever (PMID:16523438)
- MEFV gene mutation show correlation between ulcertive colitis and familial mediterranean fever gene alteration. (PMID:16614989)
- The severity of the disease and development of amyloidosis seem to have an association with M694V, the most common mutation in Syrian FMF patients. (PMID:16627024)
- MEFV mutations may act as a genetic susceptibility factor for vasculitides in familial mediterranean fever patients. (PMID:16721494)
- A putative novel MEFV missense mutation, S702C, was localized on the constructed 3-D model. (PMID:16730661)
- The C-terminal B30.2 domain of pyrin is necessary and sufficient for the interaction with caspase-1 to modulate IL-1beta production. (PMID:16785446)
- one MEFV mutation may indeed be conferring a heightened inflammation as suggested by the increased frequency in inflammatory symptoms; the carrier status for MEFV mutations seem to be unique, in that they cause an alteration in the state of “health”. (PMID:17067442)
- in Ethiopian Jews in Israel, comon polymorphism in MEFV locus was found and a relatively high rate of mutation E148Q was detected (PMID:17067447)
- Though the effects of the MEFV genotypes seem clear, there are definitely other modifying factors or genes such as MICA on the development of amyloidosis and on the course of the disease (PMID:17102945)
- Reduced expression of the MEFV gene is associated with inflammation and that it may be one of the pathogenic mechanisms of the attacks of inflammation in familial Mediterranean fever patients. (PMID:17195238)
- The profile of the MEFV gene mutations in the Tunisian population is concordant with other Arab populations but with some differences. (PMID:17276496)
- MEFV appears to be a susceptibility and modifier gene in Behcet’s disease. (PMID:17454935)
- Country of recruitment, rather than MEFV genotype, is the key risk factor for renal amyloidosis in familial Mediterranean fever. (PMID:17469185)
- spectrum of MEFV alterations in familial Mediterranean fever patients and healthy individuals in Greece (PMID:17489852)
- The onset of UC in infants should prompt a search for MEFV mutations as this association may influence the management of the disease. (PMID:17520284)
- spectrum of the MEFV mutations among our sampled Lebanese Familial Mediterranean Fever patients shows the high heterogeneity at the allelic level when compared to Arab and non-Arab populations (PMID:17566872)
- A novel mutation of the MEFV gene in a Greek family related to a non-classical, variably expressed FMF phenotype is reported. (PMID:17594097)
- This study shows a high prevalence of mutations of the MEFV gene in patients with anti-citrullinated protein antibody-negative palindromic rheumatism. (PMID:17665427)
- critically ill patients with systemic inflammatory response syndrome and sepsis have increased pyrin mutations, and patients with SIRS and sepsis carrying the pyrin mutation seem to be susceptible for a severe disease course (PMID:17696266)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Mefv | ENSMUSG00000022534 |
| rattus_norvegicus | Mefv | ENSRNOG00000008134 |
Paralogs (80): MID2 (ENSG00000080561), TRIM9 (ENSG00000100505), MID1 (ENSG00000101871), TRIM35 (ENSG00000104228), TRIM14 (ENSG00000106785), TRIM37 (ENSG00000108395), TRIM2 (ENSG00000109654), TRIM3 (ENSG00000110171), TRIM38 (ENSG00000112343), TRIM62 (ENSG00000116525), TRIM67 (ENSG00000119283), TRIM32 (ENSG00000119401), BSPRY (ENSG00000119411), TRIM25 (ENSG00000121060), TRIM6 (ENSG00000121236), TRIM24 (ENSG00000122779), TRIM51 (ENSG00000124900), TRIM28 (ENSG00000130726), TRIM21 (ENSG00000132109), TRIM5 (ENSG00000132256), TRIM22 (ENSG00000132274), TRIM47 (ENSG00000132481), TRIM45 (ENSG00000134253), TRIM29 (ENSG00000137699), TRIM54 (ENSG00000138100), PML (ENSG00000140464), TRIM65 (ENSG00000141569), TRIM43B (ENSG00000144010), TRIM43 (ENSG00000144015), TRIM7 (ENSG00000146054), TRIM41 (ENSG00000146063), TRIM50 (ENSG00000146755), TRIM4 (ENSG00000146833), TRIM55 (ENSG00000147573), TRIM48 (ENSG00000150244), TRIM36 (ENSG00000152503), TRIM11 (ENSG00000154370), TRIM74 (ENSG00000155428), TRIM42 (ENSG00000155890), TRIM63 (ENSG00000158022)
Protein
Protein identifiers
Pyrin — O15553 (reviewed: O15553)
Alternative names: Marenostrin
All UniProt accessions (9): O15553, D2DTW1, E3P8H6, F5GZV9, F5H2E5, F5H595, F5H6N9, F8W6Z2, I3L0S7
UniProt curated annotations — full annotation on UniProt →
Function. Involved in the regulation of innate immunity and the inflammatory response in response to IFNG/IFN-gamma. Organizes autophagic machinery by serving as a platform for the assembly of ULK1, Beclin 1/BECN1, ATG16L1, and ATG8 family members and recognizes specific autophagy targets, thus coordinating target recognition with assembly of the autophagic apparatus and initiation of autophagy. Acts as an autophagy receptor for the degradation of several inflammasome components, including CASP1, NLRP1 and NLRP3, hence preventing excessive IL1B- and IL18-mediated inflammation. However, it can also have a positive effect in the inflammatory pathway, acting as an innate immune sensor that triggers PYCARD/ASC specks formation, caspase-1 activation, and IL1B and IL18 production. Together with AIM2, also acts as a mediator of pyroptosis, necroptosis and apoptosis (PANoptosis), an integral part of host defense against pathogens, in response to bacterial infection. It is required for PSTPIP1-induced PYCARD/ASC oligomerization and inflammasome formation. Recruits PSTPIP1 to inflammasomes, and is required for PSTPIP1 oligomerization.
Subunit / interactions. Homotrimer. Interacts (via the B box-type zinc finger) with PSTPIP1. Interacts (via the B30.2/SPRY domain) with several components of the inflammasome complex, including CASP1 p20 and p10 subunits, CASP5, PYCARD, NLRP1, NLRP2 and NLRP3, as well as with unprocessed IL1B; this interaction may lead to autophagic degradation of these proteins. Component of the AIM2 PANoptosome complex, a multiprotein complex that drives inflammatory cell death (PANoptosis). Interacts with NFKBIA and RELA. Interacts weakly with VASP and ACTR3. Interacts with active ULK1 (phosphorylated on ‘Ser-317’) and BECN1 simultaneously. Also interacts with ATG16L1 (via WD repeats), and with ATG8 family members, including GABARAP, GABARAPL1 and, to a lesser extent, GABARAPL2, MAP1LC3A/LC3A and MAP1LC3C/LC3C. Interacts with TRIM21. Interacts with YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ and YWHAZ; the interaction is required for the down-regulation of pyrin pro-inflammatory activity.
Subcellular location. Cytoplasm. Cytoskeleton. Cell projection. Ruffle. Lamellipodium. Nucleus. Cytoplasmic vesicle. Autophagosome Nucleus.
Tissue specificity. Expressed in peripheral blood leukocytes, particularly in mature granulocytes and to a lesser extent in monocytes but not in lymphocytes. Detected in spleen, lung and muscle, probably as a result of leukocyte infiltration in these tissues. Not expressed in thymus, prostate, testis, ovary, small intestine, colon, heart, brain, placenta, liver, kidney, pancreas. Expression detected in several myeloid leukemic, colon cancer, and prostate cancer cell lines.
Post-translational modifications. Cleaved by CASP1. The N-terminal cleavage product localizes to the nucleus as a filamentous network and to the cytoplasm, interacts more strongly with RELA and NFKBIA than the full-length protein, enhances the nuclear localization of RELA and induces NFKBIA proteolysis. The C-terminal cleavage product localizes to the cytoplasm. Phosphorylation at Ser-242 is required for the interaction with 14-3-3 proteins and down-regulation of pyrin pro-inflammatory activity. Degraded along with the delivery of its substrates to autolysosomal compartments (at protein level).
Disease relevance. Familial Mediterranean fever, autosomal recessive (ARFMF) [MIM:249100] A hereditary periodic fever syndrome characterized by recurrent episodic fever, serosal inflammation and pain in the abdomen, chest or joints. It is frequently complicated by reactive amyloidosis, which leads to renal failure and can be prophylactically treated with colchicine. The disease is caused by variants affecting the gene represented in this entry. The disease-associated mutations in the B30.2/SPRY domain perturb ULK1 recruitment and autophagic degradation of inflammasome components, including NLRP3, and hence may contribute to the inflammatory phenotype associated with ARFMF. Familial Mediterranean fever, autosomal dominant (ADFMF) [MIM:134610] A hereditary periodic fever syndrome characterized by periodic fever, serosal inflammation and pain in the abdomen, chest or joints as seen also in the autosomal recessive form of the disease. It is associated with reactive renal amyloidosis and characterized by colchicine unresponsiveness. The disease is caused by variants affecting the gene represented in this entry. Pyrin-associated autoinflammatory disease (PAAND) [MIM:608068] An autosomal dominant autoinflammatory disorder characterized by childhood onset of recurrent episodes of fever, neutrophilic dermatosis, myalgia and arthralgia. The neutrophilic dermatosis comprises a spectrum of clinical manifestations, including severe acne, sterile skin abscesses, pyoderma gangrenosum, and neutrophilic small-vessel vasculitis. Pathological examination of affected skin shows a dense, predominantly neutrophilic, vascular, perivascular, and interstitial infiltrate. PAAND has incomplete penetrance and variable expressivity. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The B box-type zinc finger interacts, possibly intramolecularly, with the pyrin domain; this may be an autoinhibitory mechanism released by PSTPIP1 binding.
Induction. In monocytes, up-regulated by treatment with colchicine and IFN-alpha, by the pro-inflammatory cytokines IFNG/IFN-gamma and TNF, by bacterial lipopolysaccharides (LPS) and by retroviral infection. Repressed in monocytes by the anti-inflammatory cytokines IL10/interleukin-10, TGFB1 and IL4/interleukin-4. In neutrophils and macrophages, up-regulated by IFNG/IFN-gamma with a peak after 8 hours of treatment.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O15553-2 | 1, FL | yes |
| O15553-1 | 2, D2 | |
| O15553-3 | 3 |
RefSeq proteins (2): NP_000234, NP_001185465 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000315 | Znf_B-box | Domain |
| IPR001870 | B30.2/SPRY | Domain |
| IPR003877 | SPRY_dom | Domain |
| IPR003879 | Butyrophylin_SPRY | Domain |
| IPR004020 | DAPIN | Domain |
| IPR006574 | PRY | Domain |
| IPR011029 | DEATH-like_dom_sf | Homologous_superfamily |
| IPR013320 | ConA-like_dom_sf | Homologous_superfamily |
| IPR043136 | B30.2/SPRY_sf | Homologous_superfamily |
| IPR050143 | TRIM/RBCC | Family |
Pfam: PF00622, PF00643, PF02758, PF13765
UniProt features (124 total): sequence variant 63, strand 15, helix 14, mutagenesis site 10, region of interest 5, turn 4, compositionally biased region 3, domain 2, splice variant 2, chain 1, short sequence motif 1, site 1, modified residue 1, zinc finger region 1, coiled-coil region 1
Structure
Experimental structures (PDB)
11 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9R6Y | X-RAY DIFFRACTION | 1.26 |
| 2WL1 | X-RAY DIFFRACTION | 1.35 |
| 8C30 | X-RAY DIFFRACTION | 1.4 |
| 9R73 | X-RAY DIFFRACTION | 1.44 |
| 8C2Y | X-RAY DIFFRACTION | 1.46 |
| 9R70 | X-RAY DIFFRACTION | 1.5 |
| 8C28 | X-RAY DIFFRACTION | 1.6 |
| 9R74 | X-RAY DIFFRACTION | 2 |
| 4CG4 | X-RAY DIFFRACTION | 2.4 |
| 8SDJ | X-RAY DIFFRACTION | 2.4 |
| 2MPC | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O15553-F1 | 73.64 | 0.50 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 330–331 (cleavage; by casp1)
Post-translational modifications (1): 242
Mutagenesis-validated functional residues (10):
| Position | Phenotype |
|---|---|
| 16 | does not form mefv- and pstpip1-containing perinuclear specks. |
| 24 | does not form mefv- and pstpip1-containing perinuclear specks. |
| 208 | loss of interaction with 14-3-3 proteins. |
| 244 | no effect on pycard/asc specks formation. no effect on interaction with 14-3-3 proteins. |
| 244 | no effect on pycard/asc specks formation. increased interaction with 14-3-3 proteins. |
| 244 | increased pycard/asc specks formation. decreased interaction with 14-3-3 proteins. |
| 330 | loss of cleavage by casp1. |
| 397–404 | no effect on gabarap-binding. loss of gabarap-binding; when associated with 470-y–g-488 and 523-s–d-530. |
| 470–488 | no effect on gabarap-binding. loss of gabarap-binding; when associated with 397-i–h-404 and 523-s–d-530. |
| 523–530 | no effect on gabarap-binding. loss of gabarap-binding; when associated with 397-i–h-404 and 470-y–g-488. |
Function
Pathways and Gene Ontology
Reactome pathways
11 pathways
| ID | Pathway |
|---|---|
| R-HSA-844456 | The NLRP3 inflammasome |
| R-HSA-9660826 | Purinergic signaling in leishmaniasis infection |
| R-HSA-1643685 | Disease |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-168643 | Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways |
| R-HSA-5663205 | Infectious disease |
| R-HSA-622312 | Inflammasomes |
| R-HSA-9658195 | Leishmania infection |
| R-HSA-9664424 | Cell recruitment (pro-inflammatory response) |
| R-HSA-9824443 | Parasitic Infection Pathways |
MSigDB gene sets: 491 (showing top):
GSE45365_NK_CELL_VS_CD11B_DC_DN, GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, GOBP_REGULATION_OF_AUTOPHAGY, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_NEGATIVE_REGULATION_OF_INTERLEUKIN_1_PRODUCTION, GOBP_INFLAMMATORY_RESPONSE, REACTOME_THE_NLRP3_INFLAMMASOME, GOBP_RESPONSE_TO_PEPTIDE, REACTOME_INFLAMMASOMES, REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS, GOBP_POSITIVE_REGULATION_OF_CYTOKINE_PRODUCTION, GOCC_RUFFLE, GOBP_REGULATION_OF_CELLULAR_COMPONENT_BIOGENESIS, GOBP_INTERLEUKIN_1_PRODUCTION, HATADA_METHYLATED_IN_LUNG_CANCER_DN
GO Biological Process (20): pattern recognition receptor signaling pathway (GO:0002221), inflammatory response (GO:0006954), regulation of gene expression (GO:0010468), positive regulation of autophagy (GO:0010508), regulation of interleukin-1 beta production (GO:0032651), negative regulation of interleukin-1 beta production (GO:0032691), negative regulation of interleukin-12 production (GO:0032695), positive regulation of interleukin-1 beta production (GO:0032731), response to type II interferon (GO:0034341), innate immune response (GO:0045087), negative regulation of inflammatory response (GO:0050728), positive regulation of inflammatory response (GO:0050729), pyroptotic inflammatory response (GO:0070269), negative regulation of macrophage inflammatory protein 1 alpha production (GO:0071641), negative regulation of cytokine production involved in inflammatory response (GO:1900016), negative regulation of NLRP3 inflammasome complex assembly (GO:1900226), pyroptosome complex assembly (GO:1904270), immune system process (GO:0002376), regulation of inflammatory response (GO:0050727), response to other organism (GO:0051707)
GO Molecular Function (6): actin binding (GO:0003779), zinc ion binding (GO:0008270), identical protein binding (GO:0042802), ubiquitin protein ligase activity (GO:0061630), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (13): ruffle (GO:0001726), nucleus (GO:0005634), cytoplasm (GO:0005737), autophagosome (GO:0005776), cytosol (GO:0005829), microtubule (GO:0005874), microtubule associated complex (GO:0005875), plasma membrane (GO:0005886), lamellipodium (GO:0030027), cytoplasmic vesicle (GO:0031410), canonical inflammasome complex (GO:0061702), cytoskeleton (GO:0005856), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Inflammasomes | 1 |
| Cell recruitment (pro-inflammatory response) | 1 |
| Immune System | 1 |
| Innate Immune System | 1 |
| Disease | 1 |
| Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways | 1 |
| Parasitic Infection Pathways | 1 |
| Leishmania infection | 1 |
| Infectious disease | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| inflammatory response | 4 |
| interleukin-1 beta production | 3 |
| cellular anatomical structure | 3 |
| regulation of interleukin-1 beta production | 2 |
| negative regulation of cytokine production | 2 |
| regulation of inflammatory response | 2 |
| cell leading edge | 2 |
| plasma membrane bounded cell projection | 2 |
| cytoplasm | 2 |
| microtubule cytoskeleton | 2 |
| protein-containing complex | 2 |
| innate immune response-activating signaling pathway | 1 |
| defense response | 1 |
| gene expression | 1 |
| regulation of macromolecule biosynthetic process | 1 |
| autophagy | 1 |
| positive regulation of catabolic process | 1 |
| regulation of autophagy | 1 |
| regulation of interleukin-1 production | 1 |
| negative regulation of interleukin-1 production | 1 |
| interleukin-12 production | 1 |
| regulation of interleukin-12 production | 1 |
| positive regulation of interleukin-1 production | 1 |
| response to cytokine | 1 |
| innate immune response | 1 |
| immune response | 1 |
| defense response to symbiont | 1 |
| negative regulation of defense response | 1 |
| negative regulation of response to external stimulus | 1 |
| positive regulation of defense response | 1 |
| positive regulation of response to external stimulus | 1 |
| negative regulation of chemokine production | 1 |
| macrophage inflammatory protein-1 alpha production | 1 |
| regulation of macrophage inflammatory protein 1 alpha production | 1 |
| cytokine production involved in inflammatory response | 1 |
| regulation of cytokine production involved in inflammatory response | 1 |
| negative regulation of protein-containing complex assembly | 1 |
| NLRP3 inflammasome complex assembly | 1 |
| negative regulation of inflammasome-mediated signaling pathway | 1 |
| regulation of NLRP3 inflammasome complex assembly | 1 |
Protein interactions and networks
STRING
2164 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MEFV | AIM2 | O14862 | 999 |
| MEFV | CASP1 | P29466 | 999 |
| MEFV | NLRP1 | Q9C000 | 999 |
| MEFV | NLRC4 | Q9NPP4 | 999 |
| MEFV | PSTPIP1 | O43586 | 997 |
| MEFV | NLRP3 | Q96P20 | 990 |
| MEFV | PYCARD | Q9ULZ3 | 978 |
| MEFV | NLRP6 | P59044 | 966 |
| MEFV | NAIP | Q13075 | 954 |
| MEFV | IFI16 | Q16666 | 929 |
| MEFV | IL18 | Q14116 | 928 |
| MEFV | IL1B | P01584 | 925 |
| MEFV | NLRP2 | Q9NX02 | 922 |
| MEFV | NLRP12 | P59046 | 909 |
| MEFV | NLRP7 | Q8WX94 | 904 |
IntAct
29 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PYCARD | MEFV | psi-mi:“MI:0407”(direct interaction) | 0.800 |
| PYCARD | MEFV | psi-mi:“MI:0915”(physical association) | 0.800 |
| MEFV | PYCARD | psi-mi:“MI:0915”(physical association) | 0.800 |
| PYCARD | MEFV | psi-mi:“MI:0403”(colocalization) | 0.800 |
| MEFV | MEFV | psi-mi:“MI:0407”(direct interaction) | 0.770 |
| MEFV | MEFV | psi-mi:“MI:0915”(physical association) | 0.770 |
| PSTPIP1 | MEFV | psi-mi:“MI:0915”(physical association) | 0.580 |
| MEFV | PSTPIP1 | psi-mi:“MI:0915”(physical association) | 0.580 |
| MEFV | PSTPIP1 | psi-mi:“MI:0914”(association) | 0.580 |
| MEFV | CASP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CASP1 | MEFV | psi-mi:“MI:0915”(physical association) | 0.400 |
| MEFV | H1-2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SPICE1 | MEFV | psi-mi:“MI:0914”(association) | 0.350 |
| AFG2B | MMP24OS | psi-mi:“MI:0914”(association) | 0.350 |
| MEFV | YWHAQ | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (24): SIVA1 (Two-hybrid), SIVA1 (Affinity Capture-Western), ULK1 (Affinity Capture-Western), BECN1 (Affinity Capture-Western), ULK1 (Reconstituted Complex), ATG16L1 (Affinity Capture-Western), GABARAP (Reconstituted Complex), GABARAPL1 (Reconstituted Complex), MAP1LC3A (Reconstituted Complex), MAP1LC3C (Reconstituted Complex), GABARAPL2 (Reconstituted Complex), GABARAP (Protein-peptide), MEFV (Reconstituted Complex), NLRP3 (Affinity Capture-Western), MEFV (Two-hybrid)
ESM2 similar proteins: A0A087WVF3, A0A087WXS9, A0A087X179, A0A087X1G2, A6NDS4, A6NER0, A6QPT6, B9A6J9, M3WHG5, O14771, O15482, O15553, O19110, O76081, P0C7X1, P0C7X3, P0C7X4, P35125, P48778, P48967, P79209, Q13670, Q15697, Q2TBC4, Q3T191, Q3UZD7, Q4R2Z8, Q5DRQ5, Q5SSQ6, Q5XFX8, Q69ZB3, Q6DHY5, Q6IPX1, Q6ZMN8, Q8BLR5, Q8BWA8, Q8IYF1, Q8IZP1, Q8JZW5, Q8N7G0
Diamond homologs: A0JN74, A6NCK2, A6NDI0, A6NGJ6, A6NI03, A6NK02, A6NLI5, B1H278, C9J1S8, K7N6K2, O00635, O15553, O19085, O77666, P0CI25, P0CI26, P14373, P15533, P18892, P19474, Q02084, Q0PF16, Q12899, Q13410, Q1ACD5, Q1ACD6, Q1ACD7, Q1ACD8, Q1XHU0, Q2T9Z0, Q2YEM8, Q2YEM9, Q2YEN0, Q2YEN2, Q3UWZ0, Q3ZEE5, Q495X7, Q587N6, Q587N7, Q58DK8
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PKN1 | “down-regulates activity” | MEFV | phosphorylation |
| PKN2 | “down-regulates activity” | MEFV | phosphorylation |
| MEFV | “form complex” | “Pyrin inflammasome” | binding |
| DAMPS | “up-regulates activity” | MEFV | |
| PAMPs | “up-regulates activity” | MEFV |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1113 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 5 |
| Likely pathogenic | 6 |
| Uncertain significance | 444 |
| Likely benign | 384 |
| Benign | 31 |
Top pathogenic / likely-pathogenic (11)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1179060 | NM_000243.3(MEFV):c.1510C>T (p.Gln504Ter) | Pathogenic |
| 430715 | NM_000243.3(MEFV):c.332G>A (p.Gly111Glu) | Pathogenic |
| 917511 | NM_000243.3(MEFV):c.730G>A (p.Glu244Lys) | Pathogenic |
| 966299 | NM_000243.3(MEFV):c.265del (p.Ala89fs) | Pathogenic |
| 971850 | NM_000243.3(MEFV):c.214C>T (p.Gln72Ter) | Pathogenic |
| 1179055 | NM_000243.3(MEFV):c.1597_1598dup (p.Asp533fs) | Likely pathogenic |
| 1677080 | NM_000243.3(MEFV):c.1506_1507dup (p.Ser503fs) | Likely pathogenic |
| 1694332 | NM_000243.3(MEFV):c.1321C>T (p.Arg441Ter) | Likely pathogenic |
| 3239681 | NM_000243.3(MEFV):c.590del (p.Gly197fs) | Likely pathogenic |
| 4817969 | NM_000243.3(MEFV):c.724A>G (p.Ser242Gly) | Likely pathogenic |
| 987917 | NM_000243.2:c.(?911)(1356_?)del | Likely pathogenic |
SpliceAI
1781 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:3243695:C:CC | acceptor_gain | 1.0000 |
| 16:3243893:C:CC | acceptor_gain | 1.0000 |
| 16:3247014:A:AT | donor_loss | 1.0000 |
| 16:3247015:C:CA | donor_loss | 1.0000 |
| 16:3247242:TGTTT:T | acceptor_gain | 1.0000 |
| 16:3247247:C:CC | acceptor_gain | 1.0000 |
| 16:3256306:CTTA:C | donor_loss | 1.0000 |
| 16:3256307:TTAC:T | donor_loss | 1.0000 |
| 16:3256308:TA:T | donor_loss | 1.0000 |
| 16:3256309:A:AC | donor_gain | 1.0000 |
| 16:3256309:AC:A | donor_gain | 1.0000 |
| 16:3256309:ACC:A | donor_gain | 1.0000 |
| 16:3256309:ACCCT:A | donor_loss | 1.0000 |
| 16:3256310:C:CA | donor_loss | 1.0000 |
| 16:3256310:C:CC | donor_gain | 1.0000 |
| 16:3256310:CC:C | donor_gain | 1.0000 |
| 16:3256310:CCC:C | donor_gain | 1.0000 |
| 16:3256310:CCCTG:C | donor_gain | 1.0000 |
| 16:3243690:ATTAA:A | acceptor_gain | 0.9900 |
| 16:3243691:TTAA:T | acceptor_gain | 0.9900 |
| 16:3243892:ACTAC:A | acceptor_loss | 0.9900 |
| 16:3243907:C:CT | acceptor_gain | 0.9900 |
| 16:3243908:A:T | acceptor_gain | 0.9900 |
| 16:3244287:C:CC | acceptor_gain | 0.9900 |
| 16:3244292:A:AC | acceptor_gain | 0.9900 |
| 16:3244292:A:C | acceptor_gain | 0.9900 |
| 16:3244294:G:C | acceptor_gain | 0.9900 |
| 16:3244482:A:AC | donor_gain | 0.9900 |
| 16:3244483:C:CC | donor_gain | 0.9900 |
| 16:3247012:CCACC:C | donor_gain | 0.9900 |
AlphaMissense
5072 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:3256517:A:G | F24S | 0.992 |
| 16:3243494:A:G | W665R | 0.990 |
| 16:3243494:A:T | W665R | 0.990 |
| 16:3256505:A:G | L28P | 0.988 |
| 16:3243579:A:C | F636L | 0.987 |
| 16:3243579:A:T | F636L | 0.987 |
| 16:3243581:A:G | F636L | 0.987 |
| 16:3249533:G:C | F386L | 0.983 |
| 16:3249533:G:T | F386L | 0.983 |
| 16:3249535:A:G | F386L | 0.983 |
| 16:3256367:A:G | L74P | 0.983 |
| 16:3243216:G:C | S757R | 0.982 |
| 16:3243216:G:T | S757R | 0.982 |
| 16:3243218:T:G | S757R | 0.982 |
| 16:3243524:A:G | W655R | 0.982 |
| 16:3243524:A:T | W655R | 0.982 |
| 16:3256516:G:C | F24L | 0.980 |
| 16:3256516:G:T | F24L | 0.980 |
| 16:3256518:A:G | F24L | 0.980 |
| 16:3256382:A:G | L69P | 0.979 |
| 16:3256469:A:G | I40T | 0.979 |
| 16:3256510:G:C | F26L | 0.979 |
| 16:3256510:G:T | F26L | 0.979 |
| 16:3256512:A:G | F26L | 0.979 |
| 16:3256513:C:A | K25N | 0.978 |
| 16:3256513:C:G | K25N | 0.978 |
| 16:3243294:A:C | F731L | 0.976 |
| 16:3243294:A:T | F731L | 0.976 |
| 16:3243296:A:G | F731L | 0.976 |
| 16:3256391:G:T | A66D | 0.976 |
dbSNP variants (sampled 300 via entrez): RS1000206830 (16:3254894 T>C), RS1000657059 (16:3254711 C>A,G,T), RS1000771273 (16:3252879 G>A,T), RS1000923269 (16:3249253 A>G), RS1001220599 (16:3253792 G>A,C), RS1001256948 (16:3244733 G>A,C), RS1001641114 (16:3248585 G>A,T), RS1001713133 (16:3248350 G>A,C), RS1001938136 (16:3253322 C>A,T), RS1001986425 (16:3249785 G>A,T), RS1002291138 (16:3254618 C>G,T), RS1002530785 (16:3245720 T>C), RS1003619678 (16:3255063 T>A,C), RS1003659192 (16:3250853 G>A,C), RS1003679881 (16:3257772 T>C)
Disease associations
OMIM: gene MIM:608107 | disease phenotypes: MIM:134610, MIM:608068, MIM:152700, MIM:601744, MIM:115200, MIM:109650, MIM:242300, MIM:117000, MIM:193300, MIM:256730
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| familial Mediterranean fever | Definitive | Autosomal recessive |
| autosomal recessive familial Mediterranean fever | Definitive | Autosomal recessive |
| familial Mediterranean fever, autosomal dominant | Strong | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| familial Mediterranean fever | Definitive | SD |
Mondo (12): familial Mediterranean fever (MONDO:0018088), familial Mediterranean fever, autosomal dominant (MONDO:0007601), sweet syndrome (MONDO:0011959), autoinflammatory syndrome (MONDO:0019751), systemic lupus erythematosus (MONDO:0007915), dilated cardiomyopathy 1A (MONDO:0007269), Behcet disease (MONDO:0007191), autosomal recessive congenital ichthyosis (MONDO:0017265), central core myopathy (MONDO:0007294), von Hippel-Lindau disease (MONDO:0008667), neuronal ceroid lipofuscinosis (MONDO:0016295), autosomal recessive familial Mediterranean fever (MONDO:0009572)
Orphanet (11): Familial Mediterranean fever (Orphanet:342), Sweet syndrome (Orphanet:3243), Autoinflammatory syndrome (Orphanet:93665), Systemic lupus erythematosus (Orphanet:536), Familial dilated cardiomyopathy with conduction defect due to LMNA mutation (Orphanet:300751), Behçet disease (Orphanet:117), Autosomal recessive congenital ichthyosis (Orphanet:281097), Central core disease (Orphanet:597), Von Hippel-Lindau disease (Orphanet:892), Neuronal ceroid lipofuscinosis (Orphanet:216), OBSOLETE: Infantile neuronal ceroid lipofuscinosis (Orphanet:79263)
HPO phenotypes
164 total (30 of 164 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000031 | Epididymitis |
| HP:0000083 | Renal insufficiency |
| HP:0000093 | Proteinuria |
| HP:0000099 | Glomerulonephritis |
| HP:0000100 | Nephrotic syndrome |
| HP:0000112 | Nephropathy |
| HP:0000121 | Nephrocalcinosis |
| HP:0000155 | Oral ulcer |
| HP:0000271 | Abnormality of the face |
| HP:0000464 | Abnormality of the neck |
| HP:0000488 | Retinopathy |
| HP:0000518 | Cataract |
| HP:0000613 | Photophobia |
| HP:0000618 | Blindness |
| HP:0000708 | Atypical behavior |
| HP:0000716 | Depression |
| HP:0000737 | Irritability |
| HP:0000739 | Anxiety |
| HP:0000934 | Chondrocalcinosis |
| HP:0000988 | Skin rash |
| HP:0001055 | Erysipelas |
| HP:0001061 | Acne |
| HP:0001097 | Keratoconjunctivitis sicca |
| HP:0001155 | Abnormality of the hand |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001269 | Hemiparesis |
| HP:0001287 | Meningitis |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007844_18 | Ankylosing spondylitis | 2.000000e-12 |
MeSH disease descriptors (6)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D001528 | Behcet Syndrome | C07.465.075; C11.941.879.780.880.200; C14.907.940.100; C16.320.382.250; C17.800.827.368.250; C17.800.862.150 |
| D010505 | Familial Mediterranean Fever | C16.320.382.625 |
| D008180 | Lupus Erythematosus, Systemic | C17.300.480; C20.111.590 |
| D020512 | Myopathy, Central Core | C05.651.575.300; C10.668.491.550.300 |
| D016463 | Sweet Syndrome | C17.800.229.800 |
| D006623 | von Hippel-Lindau Disease | C10.562.925; C14.907.077.925; C16.131.077.245.750; C16.320.184.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6196061 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| (+)-JQ1 compound | decreases expression | 2 |
| Air Pollutants | affects expression, increases abundance, increases expression | 2 |
| Tobacco Smoke Pollution | decreases expression, increases expression | 2 |
| Aflatoxin B1 | increases methylation | 2 |
| Asian ginseng | decreases reaction, increases expression | 1 |
| TL8-506 | affects cotreatment, increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| abrine | increases expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Air Pollutants, Occupational | decreases expression | 1 |
| Antimycin A | increases expression | 1 |
| Beclomethasone | increases response to substance | 1 |
| Benzo(a)pyrene | affects methylation, decreases methylation | 1 |
| Diethylhexyl Phthalate | decreases reaction, increases expression | 1 |
| Estradiol | affects cotreatment, increases expression | 1 |
| Gold | increases expression | 1 |
| Lipopolysaccharides | affects cotreatment, decreases expression, affects response to substance, increases expression | 1 |
| Nickel | decreases expression | 1 |
| Ozone | increases abundance, affects expression | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Thiram | decreases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| Particulate Matter | increases expression, increases abundance | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL6076381 | Binding | Inhibition of pyrin inflammasome activation in human U-937 cells assessed as IL-1beta secretion preincubated for 1 hr followed by BAA473 addition and measured after 4 hrs | Discovery of NP3-253, a Potent Brain Penetrant Inhibitor of the NLRP3 Inflammasome. — J Med Chem |
Cellosaurus cell lines
3 cell lines: 2 induced pluripotent stem cell, 1 finite cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_9T92 | GM14978 | Finite cell line | Male |
| CVCL_9U21 | KU_FMF_iPSC_1 | Induced pluripotent stem cell | Male |
| CVCL_E4EL | RAUi002-A | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02602028 | PHASE4 | COMPLETED | The Comparison of the Efficacy of Once and Twice Daily Colchicine Dosage in Pediatric Patients With FMF |
| NCT06666335 | PHASE4 | NOT_YET_RECRUITING | A Study to Evaluate Efficacy and Safety of Anakinra in Chinese Patients With Colchicine-resistent FMF |
| NCT00120887 | PHASE4 | COMPLETED | Lupus Atherosclerosis Prevention Study |
| NCT00125307 | PHASE4 | COMPLETED | Tacrolimus for the Treatment of Systemic Lupus Erythematosus With Membranous Nephritis |
| NCT00188188 | PHASE4 | UNKNOWN | Study of Endothelial Dysfunction in Systemic Lupus and Its Role in Heart Disease |
| NCT00371501 | PHASE4 | COMPLETED | Aspirin and Statins for Prevention of Atherosclerosis and Arterial Thromboembolism in Systemic Lupus Erythematosus |
| NCT00392093 | PHASE4 | COMPLETED | Effect of Hormone Replacement Therapy on Lupus Activity |
| NCT00413361 | PHASE4 | COMPLETED | The Reduction of Systemic Lupus Erythematosus Flares :Study PLUS |
| NCT00508898 | PHASE4 | WITHDRAWN | The Efficacy and Safety of Calcitriol for the Treatment of Lupus Nephritis and Persistent Proteinuria |
| NCT00668330 | PHASE4 | COMPLETED | Steroid Induced Osteoporosis in Patients With Systemic Lupus Erythematosus |
| NCT00739050 | PHASE4 | TERMINATED | Effect of Simvastatin on Endothelial Function in Premenopausal Women With Systemic Lupus Erythematosus (0733-271)(TERMINATED) |
| NCT00815282 | PHASE4 | COMPLETED | Immune Response After Human Papillomavirus Vaccination in Patients With Autoimmune Disease |
| NCT00828178 | PHASE4 | COMPLETED | Efficacy of Fish Oil in Lupus Patients |
| NCT00866229 | PHASE4 | UNKNOWN | Efficacy and Adverse Effect of Simvastatin Compare to Rosuvastatin in Systemic Lupus Erythematosus (SLE) Patients With Corticosteroid Therapy and High Low-Density Lipoprotein (LDL) Cholesterol Level |
| NCT00911521 | PHASE4 | COMPLETED | Immunogenicity and Safety of a Quadrivalent Human Papillomavirus (HPV) Vaccine in Patients With SLE: a Controlled Study |
| NCT01101802 | PHASE4 | COMPLETED | Mycophenolate Mofetil in Systemic Lupus Erythematosus (MISSILE) |
| NCT01112215 | PHASE4 | COMPLETED | Enteric-coated Mycophenolate Sodium Versus Azathioprine for the Extra-renal Lupus Manifestations |
| NCT01151644 | PHASE4 | UNKNOWN | Safety and Efficacy of Anti-Pandemic H1N1 Vaccination in Rheumatic Diseases |
| NCT01276782 | PHASE4 | WITHDRAWN | Levothyroxine in Pregnant SLE Patients |
| NCT01322308 | PHASE4 | COMPLETED | Effect of Pioglitazone on Endothelial Function in Premenopausal Women With Uncomplicated Systemic Lupus Erythematosus |
| NCT01359826 | PHASE4 | WITHDRAWN | The Effect of Milnacipran on Fatigue and Quality of Life in Lupus Patients |
| NCT01597492 | PHASE4 | COMPLETED | A Study to Evaluate the Effect of Belimumab on Vaccine Responses in Subjects With Systemic Lupus Erythematosus (SLE) |
| NCT01632241 | PHASE4 | COMPLETED | Efficacy and Safety of Belimumab in Black Race Patients With Systemic Lupus Erythematosus (SLE) |
| NCT01705977 | PHASE4 | COMPLETED | Belimumab Assessment of Safety in SLE |
| NCT01753401 | PHASE4 | COMPLETED | Acthar for the Treatment of Systemic Lupus Erythematosus (SLE) in Patients With a History of Persistently Active Disease |
| NCT02270970 | PHASE4 | UNKNOWN | Evaluation of Belimumab Impact on a BLyS Activity Signature Test in the Absence of Confounding Polypharmacy |
| NCT02477150 | PHASE4 | COMPLETED | Safety and Immunogenicity of a Zoster Vaccine in SLE |
| NCT02741960 | PHASE4 | COMPLETED | The Effect of Metformin on Reducing Lupus Flares |
| NCT02779153 | PHASE4 | WITHDRAWN | Acthar SLE (Systemic Lupus Erythematosus) |
| NCT02953821 | PHASE4 | COMPLETED | Acthar Gel for Active Systemic Lupus Erythematosus (SLE) |
| NCT03042260 | PHASE4 | UNKNOWN | Prophylactic Trimethoprim/Sulfamethoxazole to Prevent Severe Infections in Patients With Lupus Erythematous |
| NCT03098823 | PHASE4 | COMPLETED | A Crossover Study to Compare RAYOS to IR Prednisone to Improve Fatigue and Morning Symptoms for SLE |
| NCT03122431 | PHASE4 | COMPLETED | Relevance of Monitoring Blood and Salivar Levels of Drugs Used in Rheumatic Autoimmune Diseases |
| NCT03543839 | PHASE4 | RECRUITING | Trial of Belimumab in Early Lupus |
| NCT04447053 | PHASE4 | UNKNOWN | Sequential Belimumab and T-cell Based Therapy in SLE |
| NCT04515719 | PHASE4 | COMPLETED | Efficacy and Safety of Belimumab in SLE Patients |
| NCT04893161 | PHASE4 | UNKNOWN | A Model About the Response of Belimumab in SLE |
| NCT04908865 | PHASE4 | COMPLETED | Open-label Study of Belimumab Plus Standard Therapy in Chinese Pediatric Participants With Active Systemic Lupus Erythematosus (SLE) |
| NCT04956484 | PHASE4 | COMPLETED | Belimumab In Early Systemic Lupus Erythematosus |
| NCT05559671 | PHASE4 | RECRUITING | Safety of the Herpes Zoster Subunit Vaccine in Lupus |
Related Atlas pages
- Associated diseases: familial Mediterranean fever, autosomal dominant, familial Mediterranean fever, autosomal recessive familial Mediterranean fever
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autoinflammatory syndrome, autosomal recessive congenital ichthyosis, autosomal recessive familial Mediterranean fever, Behcet disease, central core myopathy, dilated cardiomyopathy 1A, familial Mediterranean fever, familial Mediterranean fever, autosomal dominant, neuronal ceroid lipofuscinosis, sweet syndrome, von Hippel-Lindau disease