MIR302CHG

Summary

MIR302CHG (miR-302/367 cluster host gene, HGNC:41070) is a long non-coding RNA gene on chromosome 4q25.

Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex.

Source: NCBI Gene 109864269 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41070
Approved symbol	MIR302CHG
Name	miR-302/367 cluster host gene
Location	4q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249532
Ensembl biotype	lncRNA
Entrez	109864269
RNAcentral	URS0000ABD8BC — lncRNA, 414 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000505215, ENST00000505632, ENST00000509938, ENST00000510655, ENST00000688371, ENST00000691790, ENST00000731548, ENST00000731549, ENST00000731550, ENST00000731551, ENST00000731552

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505215 — 2 exons

Exon	Start	End
ENSE00003986151	112646719	112646968
ENSE00004061090	112648654	112648788

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 89.53.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 28.1028 / max 2826.9638, expressed in 146 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
53662	25.5819	143
203313	2.4210	111
53663	0.0999	50

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.53	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.71	gold quality
sural nerve	UBERON:0015488	81.09	gold quality
monocyte	CL:0000576	76.22	gold quality
colonic epithelium	UBERON:0000397	75.27	gold quality
cortical plate	UBERON:0005343	74.28	gold quality
bone marrow	UBERON:0002371	73.02	gold quality
ventricular zone	UBERON:0003053	71.04	gold quality
bone marrow cell	CL:0002092	69.62	gold quality
calcaneal tendon	UBERON:0003701	69.61	gold quality
hindlimb stylopod muscle	UBERON:0004252	69.36	gold quality
muscle tissue	UBERON:0002385	68.81	gold quality
blood	UBERON:0000178	67.66	gold quality
endometrium	UBERON:0001295	66.90	gold quality
adrenal tissue	UBERON:0018303	66.71	gold quality
granulocyte	CL:0000094	66.52	gold quality
ganglionic eminence	UBERON:0004023	66.42	gold quality
smooth muscle tissue	UBERON:0001135	66.15	gold quality
lymph node	UBERON:0000029	65.05	gold quality
rectum	UBERON:0001052	64.40	gold quality
thoracic mammary gland	UBERON:0005200	63.90	gold quality
mucosa of stomach	UBERON:0001199	63.70	gold quality
skin of abdomen	UBERON:0001416	63.18	gold quality
vermiform appendix	UBERON:0001154	63.05	gold quality
right lung	UBERON:0002167	62.59	gold quality
primary visual cortex	UBERON:0002436	62.44	gold quality
duodenum	UBERON:0002114	62.37	gold quality
corpus callosum	UBERON:0002336	62.22	gold quality
myometrium	UBERON:0001296	62.12	gold quality
placenta	UBERON:0001987	61.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.