MIR3663HG

Summary

MIR3663HG (MIR3663 host gene, HGNC:50676) is a long non-coding RNA gene on chromosome 10q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50676
Approved symbol	MIR3663HG
Name	MIR3663 host gene
Location	10q25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234474
Ensembl biotype	lncRNA
Entrez	101927704
RNAcentral	URS000075EB1C — lncRNA, 2390 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000419373, ENST00000654111, ENST00000654523, ENST00000662965, ENST00000669464, ENST00000671486, ENST00000746790, ENST00000746791, ENST00000746792, ENST00000746793, ENST00000746794, ENST00000746795

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419373 — 2 exons

Exon	Start	End
ENSE00001625764	117168860	117169059
ENSE00001732928	117158656	117160840

Expression profiles

Bgee: expression breadth broad, 43 present calls, max score 92.88.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0153 / max 14.4347, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
111596	0.0153	3

Top tissues by expression

171 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.88	gold quality
right testis	UBERON:0004534	72.96	gold quality
left testis	UBERON:0004533	72.41	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.03	gold quality
testis	UBERON:0000473	69.98	gold quality
buccal mucosa cell	CL:0002336	63.69	gold quality
tibial nerve	UBERON:0001323	58.54	gold quality
cortex of kidney	UBERON:0001225	53.25	gold quality
monocyte	CL:0000576	52.34	silver quality
prefrontal cortex	UBERON:0000451	50.17	gold quality
gastrocnemius	UBERON:0001388	48.89	gold quality
adenohypophysis	UBERON:0002196	45.71	gold quality
anatomical system	UBERON:0000467	44.17	gold quality
multicellular organism	UBERON:0000468	43.89	gold quality
material anatomical entity	UBERON:0000465	43.87	gold quality
skin of abdomen	UBERON:0001416	43.46	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	43.07	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
kidney	UBERON:0002113	42.19	gold quality
hypothalamus	UBERON:0001898	41.99	gold quality
Brodmann (1909) area 9	UBERON:0013540	41.70	silver quality
heart left ventricle	UBERON:0002084	41.49	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
body of pancreas	UBERON:0001150	41.31	silver quality
frontal cortex	UBERON:0001870	41.27	gold quality
tibial artery	UBERON:0007610	41.23	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.