MIR3677HG

Summary

MIR3677HG (MIR3677 and MIR940 host gene, HGNC:55382) is a long non-coding RNA gene on chromosome 16p13.3.

Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex.

Source: NCBI Gene 106660606 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55382
Approved symbol	MIR3677HG
Name	MIR3677 and MIR940 host gene
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260778
Ensembl biotype	lncRNA
Entrez	106660606
RNAcentral	URS00008E3982 — lncRNA, 483 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000562838, ENST00000563734, ENST00000567888, ENST00000762695, ENST00000762696, ENST00000762697, ENST00000762698, ENST00000762699, ENST00000762700, ENST00000762701

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562838 — 3 exons

Exon	Start	End
ENSE00002613685	2271676	2271891
ENSE00004118086	2268474	2268843
ENSE00004118097	2272987	2273424

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 89.96.

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.96	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.89	gold quality
mucosa of transverse colon	UBERON:0004991	79.50	gold quality
sural nerve	UBERON:0015488	79.45	gold quality
metanephros cortex	UBERON:0010533	75.86	gold quality
Brodmann (1909) area 9	UBERON:0013540	75.34	gold quality
anterior cingulate cortex	UBERON:0009835	75.01	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	74.88	gold quality
right frontal lobe	UBERON:0002810	74.87	gold quality
right lung	UBERON:0002167	74.78	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.34	gold quality
Ammon’s horn	UBERON:0001954	74.23	gold quality
nucleus accumbens	UBERON:0001882	74.12	gold quality
pituitary gland	UBERON:0000007	74.10	gold quality
cerebellar hemisphere	UBERON:0002245	73.82	gold quality
temporal lobe	UBERON:0001871	73.77	gold quality
putamen	UBERON:0001874	73.76	gold quality
adenohypophysis	UBERON:0002196	73.72	gold quality
amygdala	UBERON:0001876	73.69	gold quality
cerebral cortex	UBERON:0000956	73.67	gold quality
cerebellar cortex	UBERON:0002129	73.66	gold quality
cerebellum	UBERON:0002037	73.65	gold quality
brain	UBERON:0000955	73.31	gold quality
spleen	UBERON:0002106	73.24	gold quality
transverse colon	UBERON:0001157	72.86	gold quality
primary visual cortex	UBERON:0002436	72.84	gold quality
upper lobe of left lung	UBERON:0008952	72.54	gold quality
monocyte	CL:0000576	72.53	gold quality
granulocyte	CL:0000094	72.47	gold quality
frontal cortex	UBERON:0001870	72.46	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.