MMACHC
gene geneOn this page
Also known as DKFZP564I122cblC
Summary
MMACHC (metabolism of cobalamin associated C, HGNC:24525) is a protein-coding gene on chromosome 1p34.1, encoding Cyanocobalamin reductase / alkylcobalamin dealkylase (Q9Y4U1). Cobalamin (vitamin B12) cytosolic chaperone that catalyzes the reductive decyanation of cyanocob(III)alamin (cyanocobalamin, CNCbl) to yield cob(II)alamin and cyanide, using FAD or FMN as cofactors and NADPH as cosubstrate.
The exact function of the protein encoded by this gene is not known, however, its C-terminal region shows similarity to TonB, a bacterial protein involved in energy transduction for cobalamin (vitamin B12) uptake. Hence, it is postulated that this protein may have a role in the binding and intracellular trafficking of cobalamin. Mutations in this gene are associated with methylmalonic aciduria and homocystinuria type cblC.
Source: NCBI Gene 25974 — RefSeq curated summary.
At a glance
- Gene–disease (curated): methylmalonic aciduria and homocystinuria type cblC (Definitive, ClinGen)
- GWAS associations: 16
- Clinical variants (ClinVar): 694 total — 58 pathogenic, 49 likely-pathogenic
- Phenotypes (HPO): 113
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- MANE Select transcript:
NM_015506
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24525 |
| Approved symbol | MMACHC |
| Name | metabolism of cobalamin associated C |
| Location | 1p34.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DKFZP564I122, cblC |
| Ensembl gene | ENSG00000132763 |
| Ensembl biotype | protein_coding |
| OMIM | 609831 |
| Entrez | 25974 |
Gene structure
Transcript identifiers
Ensembl transcripts: 4 — 3 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000401061, ENST00000477188, ENST00000616135, ENST00000933807
RefSeq mRNA: 2 — MANE Select: NM_015506
NM_001330540, NM_015506
CCDS: CCDS41324, CCDS81315
Canonical transcript exons
ENST00000401061 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000905999 | 45507356 | 45507550 |
| ENSE00001141158 | 45508212 | 45508364 |
| ENSE00001456871 | 45500300 | 45500413 |
| ENSE00001546178 | 45508796 | 45513382 |
Expression profiles
Bgee: expression breadth ubiquitous, 177 present calls, max score 82.39.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 15.1811 / max 92.3771, expressed in 1712 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 2688 | 14.3338 | 1702 |
| 2687 | 0.6861 | 391 |
| 2689 | 0.1612 | 63 |
Top tissues by expression
283 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 82.39 | gold quality |
| liver | UBERON:0002107 | 81.42 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 77.73 | gold quality |
| stromal cell of endometrium | CL:0002255 | 77.52 | gold quality |
| ventricular zone | UBERON:0003053 | 77.11 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 77.11 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 76.80 | gold quality |
| right atrium auricular region | UBERON:0006631 | 76.46 | gold quality |
| heart left ventricle | UBERON:0002084 | 75.83 | gold quality |
| cardiac ventricle | UBERON:0002082 | 75.52 | gold quality |
| cardiac atrium | UBERON:0002081 | 75.49 | gold quality |
| prefrontal cortex | UBERON:0000451 | 75.22 | gold quality |
| heart | UBERON:0000948 | 74.05 | gold quality |
| muscle of leg | UBERON:0001383 | 73.89 | gold quality |
| right adrenal gland | UBERON:0001233 | 73.81 | gold quality |
| apex of heart | UBERON:0002098 | 73.67 | gold quality |
| gastrocnemius | UBERON:0001388 | 73.25 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 72.96 | gold quality |
| rectum | UBERON:0001052 | 72.88 | gold quality |
| left adrenal gland | UBERON:0001234 | 72.58 | gold quality |
| ganglionic eminence | UBERON:0004023 | 72.52 | gold quality |
| cortical plate | UBERON:0005343 | 72.17 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 71.95 | gold quality |
| colonic epithelium | UBERON:0000397 | 71.46 | gold quality |
| adrenal gland | UBERON:0002369 | 71.30 | gold quality |
| islet of Langerhans | UBERON:0000006 | 71.22 | gold quality |
| adrenal tissue | UBERON:0018303 | 70.89 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 70.87 | gold quality |
| adrenal cortex | UBERON:0001235 | 70.85 | gold quality |
| muscle organ | UBERON:0001630 | 70.36 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9543 | yes | 34.79 |
| E-ANND-3 | yes | 13.26 |
| E-CURD-10 | no | 110.67 |
| E-ENAD-17 | no | 87.20 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HCFC1
miRNA regulators (miRDB)
66 targeting MMACHC, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-3162-3P | 100.00 | 65.37 | 363 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-2110 | 99.96 | 66.68 | 1930 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-6768-5P | 99.92 | 67.36 | 1942 |
| HSA-MIR-3140-3P | 99.88 | 68.47 | 2069 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-6745 | 99.74 | 65.33 | 1321 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-6512-3P | 99.65 | 66.07 | 1468 |
| HSA-MIR-6720-5P | 99.65 | 66.22 | 1459 |
| HSA-MIR-1251-3P | 99.64 | 67.21 | 1408 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-1287-3P | 99.63 | 66.93 | 492 |
| HSA-MIR-6126 | 99.62 | 68.09 | 996 |
| HSA-MIR-4643 | 99.49 | 67.63 | 1791 |
| HSA-MIR-208A-5P | 99.42 | 70.83 | 1913 |
| HSA-MIR-208B-5P | 99.42 | 70.83 | 1952 |
| HSA-MIR-6828-5P | 99.31 | 69.21 | 1433 |
| HSA-MIR-6878-3P | 99.24 | 64.23 | 920 |
| HSA-MIR-642A-3P | 99.23 | 67.67 | 1258 |
| HSA-MIR-642B-3P | 99.23 | 67.67 | 1258 |
| HSA-MIR-6744-3P | 99.22 | 64.41 | 972 |
| HSA-MIR-3125 | 99.14 | 68.49 | 2269 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- One mutation, 271dupA, in MMACHC accounted for 40% of all disease alleles. (PMID:16311595)
- Mutation analysis of the MMACHC gene showed that both patients were homozygous for 394C –> T which suggests a founder effect in Late onset cobalamin C disorder. (PMID:17431913)
- c.271dupA (accounting for 55% of the MMACH alleles in our cohort) followed by c.394C>T (16%) and c.331C>T (9%) were the most frequent mutations. (PMID:18164228)
- Most patients (eight of nine patients investigated) were compound heterozygotes for the 271dupA mutation and a missense mutation. (PMID:18245139)
- MMACHC catalyzes a reductive decyanation reaction that removes the cyanide group in vitamin B(12) or cyanocobalamin (PMID:18779575)
- A new mutation (146_154 del CCTTCCTGG) in the MMACHC gene was detected in a Chinese family with methylmalonic aciduria. (PMID:19199254)
- Epigenetic inactivation of the MMACHC gene is responsible for methionine dependence in human melanoma cell line MeWo-LC1. (PMID:19200761)
- MMACHC was sequenced from the DNA of 118 cblC individuals. Eleven novel mutations were identified.Genotype-phenotype correlations of common mutations were apparent. (PMID:19370762)
- These studies suggest that the CblC protein is responsible for early processing of both CNCbl (decyanation) and alkylcobalamins (dealkylation) in mammalian cells. (PMID:19447654)
- MMACHC with the G147D mutation is unable to bind either cyanocobalamin or hydroxocobalamin, providing a straight forward explanation for the absence of response to either vitamin form. (PMID:19700356)
- Mutations in MMACHC are associated with altered cellular oxidative stress and apoptosis processes in the presence or absence of vitamin B(12). (PMID:19760748)
- Diverse and clinically significant structural heart defects appear to be highly prevalent in cblC type methylmalonic aciduria and homocystinuria. (PMID:19767224)
- Data show that the catalytic turnover numbers for the dealkylation of methylcobalamin and 5’-deoxyadenosylcobalamin by MMACHC are 11.7 +/- 0.2 and 0.174 +/- 0.006 h(-1) at 20 degrees C, respectively. (PMID:19801555)
- MMACHC-wt and MMACHC-R161Q are both very thermolabile proteins in their apo forms, with melting temperatures (T(m)) of 39.3+/-1.0 and 37.1+/-0.7 degrees C, respectively (PMID:20219402)
- defects occurring in the MMACHC gene are the major cause of this disease in Chinese patients with combined methylmalonic aciduria and homocystinuria (PMID:20631720)
- MMADHC was confirmed as a binding partner for MMACHC both in vitro (SPR) and in vivo (bacterial two-hybrid system). (PMID:21071249)
- a structural framework provides a framework for understanding catalytic function and disease mechanism for the multifunctional MMACHC complex. (PMID:22642810)
- The function of MMADHC is exerted through its structured C-terminal domain via interactions with MMACHC. (PMID:22832074)
- Subcellular location of MMACHC and MMADHC, two human proteins central to intracellular vitamin B(12) metabolism. (PMID:23270877)
- data suggest that the interaction of methionine synthase with MMACHC may play a role in the regulation of the cellular processing of cobalamins that is required for cobalamin cofactor synthesis (PMID:23825108)
- The gene responsible for cblC, named MMACHC, catalyzes the reductive decyanation of cyanocobalamin. (PMID:24577983)
- mutation analysis of the MMACHC gene in four patients revealed novel heterozygous mutations at nucleotide 276 (c.276G > A [p.Glu926Glu] and c.276G > T [p.Glu92Asp]), which is located at the end of exon 2. (PMID:24853097)
- HCFC1 plays a role in craniofacial development, which is in part mediated through the regulation of MMACHC expression (PMID:25281006)
- Results propose a model whereby membrane-bound LMBD1 and ABCD4 facilitate the vectorial delivery of lysosomal vitamin B12 to cytoplasmic MMACHC. (PMID:25535791)
- an adult patient with bull’s eye macular lesions and no clinically relevant systemic symptoms was diagnosed with cblC by genetic screening and follow-up biochemical laboratory tests. (PMID:25687216)
- Five different known mutations in either MUT or MMACHC genes were identified in seven of the eight Chinese patients with methyl malonic acidemia. (PMID:25982642)
- A novel mutation p.G155R of the MMACHC gene is identified in prenatal diagnosis of combined methylmalonic aciduria and homocystinuria. (PMID:26149271)
- MMACHC mutation was found in children diagnosed with hemolytic uremic syndrome secondary to cobalamin C disorder. (PMID:26253414)
- These results indicated that hypergonadotropic hypogonadism may be a novel clinical manifestation of cblC disease, but more reports on additional patients are needed to support this hypothesis. (PMID:26283149)
- the MMACHC-MMADHC complex is a 1:1 heterodimer, where the interaction region overlaps with the MMACHC-Cbl binding site (PMID:26483544)
- Sequencing of the MMACHC gene is used for confirming the diagnosis of cblC disease. MMACHC mutations were found in all the nine patients. 7 different mutations were identified, including c.609G>A, c.455_457delCCC, c.394C>T, c.445_446insA, c.658_660delAAG, c.452A>G and IVS1+1G>A. The most frequent mutation was c.609G>A (6/9). Two patients had homozygous mutations (c.445_446insA/c.445_446insA and c.609G>A/c.609G>A). (PMID:26563984)
- Case Report: c.567dupT,p.(Ile190Tyrfs*13) MMACHC heterozygous mutation underlying methylmalonic academia in infant. (PMID:27383490)
- These data show that the processing of cobalamin in cytoplasm occurs in a multiprotein complex composed of at least methionine synthase, methionine synthase reductase, MMACHC and MMADHC. (PMID:27771510)
- The crystal structure of ceCblC provides insights into how architectural differences at the alpha- and beta-faces of cobalamin promote the thiol oxidase activity of ceCblC but mute it in wild-type human CblC. (PMID:28442570)
- Partial CblC-type inherited Methylmalonic acidemia (MMACHC heterozygous mutation exonl: c. 80A >G, c. 609G >A) can onset with severe metabolic Atypical hemolytic uremic syndrome. (PMID:29068997)
- The epimutation is present in three generations and results from PRDX1 mutations that force antisense transcription of MMACHC. (PMID:29302025)
- THAP11F80L exhibited a strong effect on association with the MMACHC promoter and led to a decrease in MMACHC gene transcription, suggesting that the THAP11F80L mutation is directly responsible for the observed cobalamin disorder (PMID:31905202)
- Generation of a Human iPSC line (SDQLCHi021-A) from a patient with methylmalonic acidemia cblC type carrying compound heterozygous mutations in MMAHC gene. (PMID:32058304)
- Analysis of fibroblasts from patients with cblC and cblG genetic defects of cobalamin metabolism reveals global dysregulation of alternative splicing. (PMID:32068834)
- The vitamin B12 processing enzyme, mmachc, is essential for zebrafish survival, growth and retinal morphology. (PMID:32186706)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | mmachc | ENSDARG00000043877 |
| mus_musculus | Mmachc | ENSMUSG00000028690 |
| rattus_norvegicus | Mmachc | ENSRNOG00000017233 |
| caenorhabditis_elegans | WBGENE00022766 |
Protein
Protein identifiers
Cyanocobalamin reductase / alkylcobalamin dealkylase — Q9Y4U1 (reviewed: Q9Y4U1)
Alternative names: Alkylcobalamin:glutathione S-alkyltransferase, CblC, Cyanocobalamin reductase (cyanide-eliminating), Methylmalonic aciduria and homocystinuria type C protein
All UniProt accessions (2): Q9Y4U1, A0A0C4DGU2
UniProt curated annotations — full annotation on UniProt →
Function. Cobalamin (vitamin B12) cytosolic chaperone that catalyzes the reductive decyanation of cyanocob(III)alamin (cyanocobalamin, CNCbl) to yield cob(II)alamin and cyanide, using FAD or FMN as cofactors and NADPH as cosubstrate. Cyanocobalamin constitutes the inactive form of vitamin B12 introduced from the diet, and is converted into the active cofactors methylcobalamin (MeCbl) involved in methionine biosynthesis, and 5’-deoxyadenosylcobalamin (AdoCbl) involved in the TCA cycle. Forms a complex with the lysosomal transporter ABCD4 and its chaperone LMBRD1, to transport cobalamin across the lysosomal membrane into the cytosol. The processing of cobalamin in the cytosol occurs in a multiprotein complex composed of at least MMACHC, MMADHC, MTRR (methionine synthase reductase) and MTR (methionine synthase) which may contribute to shuttle safely and efficiently cobalamin towards MTR in order to produce methionine. Also acts as a glutathione transferase by catalyzing the dealkylation of the alkylcob(III)alamins MeCbl and AdoCbl, using the thiolate of glutathione for nucleophilic displacement to generate cob(I)alamin and the corresponding glutathione thioether. The conversion of incoming MeCbl or AdoCbl into a common intermediate cob(I)alamin is necessary to meet the cellular needs for both cofactors. Cysteine and homocysteine cannot substitute for glutathione in this reaction.
Subunit / interactions. Monomer in the absence of bound substrate. Homodimer; dimerization is triggered by binding to FMN or adenosylcobalamin. Interacts with LMBRD1 and ABCD4; the interaction ensures the transport of cobalamin from the lysosome to the cytoplasm. Forms a multiprotein complex with MMADHC, MTR and MTRR; the interaction with MTR could modulate MMACHC-dependent processing of cobalamin. Heterodimer with MMADHC; the interaction might play a role in the regulation of the balance between AdoCbl and MeCbl synthesis.
Subcellular location. Cytoplasm. Cytosol.
Tissue specificity. Widely expressed. Expressed at higher level in fetal liver. Also expressed in spleen, lymph node, thymus and bone marrow. Weakly or not expressed in peripheral blood leukocytes.
Disease relevance. Methylmalonic aciduria and homocystinuria, cblC type (MAHCC) [MIM:277400] An autosomal recessive disorder of cobalamin metabolism characterized by decreased levels of the coenzymes adenosylcobalamin (AdoCbl) and methylcobalamin (MeCbl). Affected individuals may have developmental, hematologic, neurologic, metabolic, ophthalmologic, and dermatologic clinical findings. Although considered a disease of infancy or childhood, some individuals develop symptoms in adulthood. The disease is caused by variants affecting the gene represented in this entry.
Cofactor. Can utilize both FAD and FMN.
Similarity. Belongs to the MMACHC family.
RefSeq proteins (2): NP_001317469, NP_056321* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR032037 | MMACHC | Family |
Pfam: PF16690
Enzyme classification (BRENDA):
- EC 2.5.1.151 — alkylcobalamin dealkylase (BRENDA: 2 organisms, 20 substrates, 0 inhibitors, 0 Km, 12 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| 5’-DEOXYADENOSYLCOBALAMIN | — | 0 |
| BUTYRYLCOBALAMIN | — | 0 |
| CYANOCOBALAMIN | — | 0 |
| ETHYLCOBALAMIN | — | 0 |
| HEXYLCOBALAMIN | — | 0 |
| METHYLCOBALAMIN | — | 0 |
| NITROCOBALAMIN | — | 0 |
| PENTYLCOBALAMIN | — | 0 |
| PROPYLCOBALAMIN | — | 0 |
Catalyzed reactions (Rhea), 4 shown:
- 2 cob(II)alamin-[cyanocobalamin reductase] + 2 hydrogen cyanide + NADP(+) = 2 cyanocob(III)alamin + 2 apo-[cyanocobalamin reductase] + NADPH + H(+) (RHEA:16113)
- apo-[alkylcobalamin reductase] + an R-cob(III)alamin + glutathione = cob(I)alamin-[alkylcobalamin reductase] + an S-substituted glutathione + H(+) (RHEA:40719)
- apo-[alkylcobalamin reductase] + methylcob(III)alamin + glutathione = S-methyl glutathione + cob(I)alamin-[alkylcobalamin reductase] + H(+) (RHEA:63132)
- apo-[alkylcobalamin reductase] + adenosylcob(III)alamin + glutathione = S-adenosylglutathione + cob(I)alamin-[alkylcobalamin reductase] + H(+) (RHEA:63136)
UniProt features (56 total): sequence variant 15, helix 15, strand 9, binding site 5, modified residue 4, mutagenesis site 3, turn 2, chain 1, region of interest 1, sequence conflict 1
Structure
Experimental structures (PDB)
7 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7WUZ | X-RAY DIFFRACTION | 1.93 |
| 3SC0 | X-RAY DIFFRACTION | 1.95 |
| 3SBZ | X-RAY DIFFRACTION | 2 |
| 3SOM | X-RAY DIFFRACTION | 2.4 |
| 5UOS | X-RAY DIFFRACTION | 2.51 |
| 3SBY | X-RAY DIFFRACTION | 2.71 |
| 9MRS | X-RAY DIFFRACTION | 3.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9Y4U1-F1 | 86.41 | 0.76 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (5): 104; 115–118; 129–131; 149; 160
Post-translational modifications (4): 279, 245, 247, 275
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 122 | reduced affinity for cyanocobalamin. |
| 206 | impairs protein folding. |
| 230 | reduced activity in dealkylation of methylcobalamin. |
Function
Pathways and Gene Ontology
Reactome pathways
11 pathways
| ID | Pathway |
|---|---|
| R-HSA-3359473 | Defective MMADHC causes MMAHCD |
| R-HSA-3359474 | Defective MMACHC causes MAHCC |
| R-HSA-9759218 | Cobalamin (Cbl) metabolism |
| R-HSA-1430728 | Metabolism |
| R-HSA-1643685 | Disease |
| R-HSA-196741 | Cobalamin (Cbl, vitamin B12) transport and metabolism |
| R-HSA-196849 | Metabolism of water-soluble vitamins and cofactors |
| R-HSA-196854 | Metabolism of vitamins and cofactors |
| R-HSA-3296469 | Defects in cobalamin (B12) metabolism |
| R-HSA-3296482 | Defects in vitamin and cofactor metabolism |
| R-HSA-5668914 | Diseases of metabolism |
MSigDB gene sets: 501 (showing top):
GSE45365_HEALTHY_VS_MCMV_INFECTION_CD8_TCELL_IFNAR_KO_UP, GOBP_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS, GOBP_REGULATION_OF_ERBB_SIGNALING_PATHWAY, GOBP_NEGATIVE_REGULATION_OF_ERBB_SIGNALING_PATHWAY, ROVERSI_GLIOMA_COPY_NUMBER_UP, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_MAPK_CASCADE, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, GOBP_DEMETHYLATION, KEGG_ERBB_SIGNALING_PATHWAY, GOBP_COBALAMIN_METABOLIC_PROCESS, GOBP_ERBB_SIGNALING_PATHWAY, CHARAFE_BREAST_CANCER_BASAL_VS_MESENCHYMAL_UP
GO Biological Process (3): glutathione metabolic process (GO:0006749), cobalamin metabolic process (GO:0009235), demethylation (GO:0070988)
GO Molecular Function (10): oxidoreductase activity (GO:0016491), transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765), cobalamin binding (GO:0031419), demethylase activity (GO:0032451), cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity (GO:0033787), protein homodimerization activity (GO:0042803), glutathione binding (GO:0043295), FAD binding (GO:0071949), protein binding (GO:0005515), transferase activity (GO:0016740)
GO Cellular Component (2): cytoplasm (GO:0005737), cytosol (GO:0005829)
Reactome top-level categories
Rollup of top-8 pathways:
| Category | Pathways |
|---|---|
| Defects in cobalamin (B12) metabolism | 2 |
| Cobalamin (Cbl, vitamin B12) transport and metabolism | 1 |
| Metabolism of water-soluble vitamins and cofactors | 1 |
| Metabolism of vitamins and cofactors | 1 |
| Metabolism | 1 |
| Defects in vitamin and cofactor metabolism | 1 |
| Diseases of metabolism | 1 |
| Disease | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| catalytic activity | 3 |
| cellular anatomical structure | 2 |
| modified amino acid metabolic process | 1 |
| sulfur compound metabolic process | 1 |
| tetrapyrrole metabolic process | 1 |
| metabolic process | 1 |
| transferase activity | 1 |
| vitamin binding | 1 |
| tetrapyrrole binding | 1 |
| heterocyclic compound binding | 1 |
| oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor | 1 |
| identical protein binding | 1 |
| protein dimerization activity | 1 |
| anion binding | 1 |
| modified amino acid binding | 1 |
| oligopeptide binding | 1 |
| sulfur compound binding | 1 |
| flavin adenine dinucleotide binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
Protein interactions and networks
STRING
1348 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MMACHC | LMBRD1 | Q9NUN5 | 972 |
| MMACHC | MMADHC | Q9H3L0 | 964 |
| MMACHC | MMAA | Q8IVH4 | 947 |
| MMACHC | MMAB | Q96EY8 | 947 |
| MMACHC | MMUT | P22033 | 910 |
| MMACHC | MTR | Q99707 | 902 |
| MMACHC | DGKE | P52429 | 780 |
| MMACHC | MTRR | Q9UBK8 | 773 |
| MMACHC | ABCD4 | O14678 | 735 |
| MMACHC | CFHR5 | Q9BXR6 | 633 |
| MMACHC | CFHR1 | Q03591 | 616 |
| MMACHC | ADAMTS13 | Q76LX8 | 613 |
| MMACHC | CFH | P08603 | 606 |
| MMACHC | CD320 | Q9NPF0 | 596 |
| MMACHC | MCEE | Q96PE7 | 593 |
IntAct
16 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TEPSIN | AP4M1 | psi-mi:“MI:0914”(association) | 0.700 |
| Mmadhc | psi-mi:“MI:0407”(direct interaction) | 0.620 | |
| MMADHC | psi-mi:“MI:0407”(direct interaction) | 0.560 | |
| MMACHC | CCT6B | psi-mi:“MI:0915”(physical association) | 0.500 |
| MTR | MMACHC | psi-mi:“MI:0915”(physical association) | 0.470 |
| MMACHC | MTR | psi-mi:“MI:2364”(proximity) | 0.470 |
| SELENBP1 | CAMKMT | psi-mi:“MI:0914”(association) | 0.350 |
| BNIP5 | GNPAT | psi-mi:“MI:0914”(association) | 0.350 |
| SELENBP1 | ZNF24 | psi-mi:“MI:0914”(association) | 0.350 |
| MMACHC | TCP1 | psi-mi:“MI:0914”(association) | 0.350 |
| SELENBP1 | TRMT5 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (19): UBE2L3 (Co-fractionation), MMACHC (Affinity Capture-MS), MMACHC (Affinity Capture-RNA), MMACHC (Affinity Capture-MS), MMACHC (Affinity Capture-MS), TCP1 (Affinity Capture-MS), CCT2 (Affinity Capture-MS), CCT7 (Affinity Capture-MS), CCT4 (Affinity Capture-MS), MMACHC (Affinity Capture-MS), CCT6B (Affinity Capture-MS), MMACHC (Affinity Capture-MS), CCT3 (Affinity Capture-MS), PDCL (Affinity Capture-MS), CCT6A (Affinity Capture-MS)
ESM2 similar proteins: A0A0B5AC19, A1VN15, A2C538, A2CBW9, A2CCP5, A4XT72, A5GIZ3, A5GVQ6, A8IC17, A9KC01, A9NA93, O52512, O89748, P03513, P04873, P08463, P14961, P45944, P52132, P72848, P77206, P84786, Q00124, Q02189, Q02190, Q0ICV5, Q16BB4, Q1GLD5, Q1I6K3, Q3AMK3, Q3AUU4, Q3AWA8, Q46IM1, Q51320, Q5N3S5, Q5N5A3, Q6E0W8, Q6LLK0, Q7NEK3, Q7U4M7
Diamond homologs: Q5E9C8, Q5RFU5, Q5ZL21, Q7Z144, Q9CZD0, Q9Y4U1
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
694 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 58 |
| Likely pathogenic | 49 |
| Uncertain significance | 264 |
| Likely benign | 195 |
| Benign | 22 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1076507 | NM_015506.3(MMACHC):c.449T>A (p.Ile150Lys) | Pathogenic |
| 1076669 | NM_015506.3(MMACHC):c.123dup (p.Pro42fs) | Pathogenic |
| 1252060 | NM_015506.3(MMACHC):c.352C>T (p.Gln118Ter) | Pathogenic |
| 1334896 | NM_015506.3(MMACHC):c.187del (p.Leu63fs) | Pathogenic |
| 1368644 | NM_015506.3(MMACHC):c.315C>A (p.Tyr105Ter) | Pathogenic |
| 1421 | NM_015506.3(MMACHC):c.271dup (p.Arg91fs) | Pathogenic |
| 1423 | NM_015506.3(MMACHC):c.394C>T (p.Arg132Ter) | Pathogenic |
| 1424 | NM_015506.3(MMACHC):c.331C>T (p.Arg111Ter) | Pathogenic |
| 1446343 | NM_015506.3(MMACHC):c.419G>A (p.Trp140Ter) | Pathogenic |
| 1453962 | NC_000001.10:g.(?45965995)(45966095_?)del | Pathogenic |
| 1454386 | NM_015506.3(MMACHC):c.534del (p.Lys178fs) | Pathogenic |
| 1459897 | NC_000001.10:g.(?45974458)(45974897_?)del | Pathogenic |
| 161117 | NM_015506.3(MMACHC):c.276G>T (p.Glu92Asp) | Pathogenic |
| 161119 | NM_015506.3(MMACHC):c.464G>A (p.Gly155Glu) | Pathogenic |
| 1938082 | NM_015506.3(MMACHC):c.151_152del (p.Leu51fs) | Pathogenic |
| 2024522 | NM_015506.3(MMACHC):c.81+1G>T | Pathogenic |
| 2027786 | NM_015506.3(MMACHC):c.477_478insCATCCGAGGGGTAGTGCTGCTGCCAGGGATAGAGGTGCCAGATCTGCCACCCAGAAAACCTCATGACTGTGTACCTACAAGAGCTGAC (p.Ile160delinsHisProArgGlySerAlaAlaAlaArgAspArgGlyAlaArgSerAlaThrGlnLysThrSerTer) | Pathogenic |
| 203823 | NM_015506.3(MMACHC):c.3G>A (p.Met1Ile) | Pathogenic |
| 203825 | NM_015506.3(MMACHC):c.217C>T (p.Arg73Ter) | Pathogenic |
| 203827 | NM_015506.3(MMACHC):c.420G>A (p.Trp140Ter) | Pathogenic |
| 203834 | NM_015506.3(MMACHC):c.445_446del (p.Cys149fs) | Pathogenic |
| 203835 | NM_015506.3(MMACHC):c.328_331del (p.Asn110fs) | Pathogenic |
| 2068815 | NM_015506.3(MMACHC):c.433del (p.Ile145fs) | Pathogenic |
| 2130931 | NM_015506.3(MMACHC):c.81+2T>C | Pathogenic |
| 2202756 | NM_015506.3(MMACHC):c.14_24del (p.Val5fs) | Pathogenic |
| 2504060 | NM_015506.3(MMACHC):c.321_329delinsACACC (p.Asn110fs) | Pathogenic |
| 2676630 | NM_015506.3(MMACHC):c.228_231del (p.Asp77fs) | Pathogenic |
| 2717233 | NM_015506.3(MMACHC):c.93C>A (p.Tyr31Ter) | Pathogenic |
| 2725295 | NM_015506.3(MMACHC):c.1A>T (p.Met1Leu) | Pathogenic |
| 2733897 | NM_015506.3(MMACHC):c.126_141del (p.Leu43fs) | Pathogenic |
SpliceAI
542 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:45507548:GAG:G | donor_gain | 1.0000 |
| 1:45507548:GAGGT:G | donor_loss | 1.0000 |
| 1:45507549:AGG:A | donor_loss | 1.0000 |
| 1:45507550:GGT:G | donor_loss | 1.0000 |
| 1:45507552:T:A | donor_loss | 1.0000 |
| 1:45508202:A:AG | acceptor_gain | 1.0000 |
| 1:45508202:ACT:A | acceptor_gain | 1.0000 |
| 1:45508203:C:G | acceptor_gain | 1.0000 |
| 1:45508204:T:A | acceptor_gain | 1.0000 |
| 1:45508207:TCCA:T | acceptor_loss | 1.0000 |
| 1:45508208:CCA:C | acceptor_loss | 1.0000 |
| 1:45508208:CCAG:C | acceptor_gain | 1.0000 |
| 1:45508209:CAG:C | acceptor_gain | 1.0000 |
| 1:45508210:A:AG | acceptor_gain | 1.0000 |
| 1:45508210:AGA:A | acceptor_gain | 1.0000 |
| 1:45508211:G:C | acceptor_gain | 1.0000 |
| 1:45508211:G:GA | acceptor_gain | 1.0000 |
| 1:45508211:GA:G | acceptor_gain | 1.0000 |
| 1:45508211:GAGC:G | acceptor_gain | 1.0000 |
| 1:45508211:GAGCC:G | acceptor_gain | 1.0000 |
| 1:45508363:AG:A | donor_loss | 1.0000 |
| 1:45508364:GGT:G | donor_loss | 1.0000 |
| 1:45508366:T:G | donor_loss | 1.0000 |
| 1:45511411:CACA:C | acceptor_gain | 1.0000 |
| 1:45511412:ACA:A | acceptor_gain | 1.0000 |
| 1:45511413:CA:C | acceptor_gain | 1.0000 |
| 1:45511413:CAC:C | acceptor_gain | 1.0000 |
| 1:45511414:ACT:A | acceptor_loss | 1.0000 |
| 1:45511415:C:CC | acceptor_gain | 1.0000 |
| 1:45500378:C:G | donor_gain | 0.9900 |
AlphaMissense
1806 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:45507434:A:C | S54R | 0.995 |
| 1:45507436:C:A | S54R | 0.995 |
| 1:45507436:C:G | S54R | 0.995 |
| 1:45508838:T:C | F158L | 0.993 |
| 1:45508840:T:A | F158L | 0.993 |
| 1:45508840:T:G | F158L | 0.993 |
| 1:45508297:C:A | A121D | 0.992 |
| 1:45508835:T:A | W157R | 0.991 |
| 1:45508835:T:C | W157R | 0.991 |
| 1:45508813:C:G | C149W | 0.990 |
| 1:45507449:T:C | F59L | 0.989 |
| 1:45507451:T:A | F59L | 0.989 |
| 1:45507451:T:G | F59L | 0.989 |
| 1:45508952:T:C | F196L | 0.987 |
| 1:45508954:C:A | F196L | 0.987 |
| 1:45508954:C:G | F196L | 0.987 |
| 1:45508811:T:C | C149R | 0.985 |
| 1:45509030:T:G | Y222D | 0.984 |
| 1:45508305:G:C | A124P | 0.982 |
| 1:45508812:G:A | C149Y | 0.982 |
| 1:45508830:G:A | G155E | 0.982 |
| 1:45508839:T:C | F158S | 0.982 |
| 1:45508306:C:A | A124D | 0.981 |
| 1:45507518:T:C | C82R | 0.980 |
| 1:45508294:C:A | A120E | 0.980 |
| 1:45508315:C:A | A127D | 0.980 |
| 1:45509033:T:C | F223L | 0.980 |
| 1:45509035:C:A | F223L | 0.980 |
| 1:45509035:C:G | F223L | 0.980 |
| 1:45508819:C:A | H151Q | 0.979 |
dbSNP variants (sampled 300 via entrez): RS1000037450 (1:45504287 G>C), RS1000250797 (1:45507222 A>G), RS1000355237 (1:45510918 T>C), RS1000410685 (1:45510632 C>A), RS1000688178 (1:45512743 C>G,T), RS1000976572 (1:45506801 C>T), RS1001148146 (1:45500812 C>T), RS1001170788 (1:45513345 G>A), RS1001194334 (1:45512301 G>A,C), RS1001596498 (1:45500782 T>G), RS1001626236 (1:45506134 G>A), RS1001774683 (1:45511999 G>A,T), RS1001918843 (1:45513080 A>C), RS1001973766 (1:45511631 C>A), RS1002236397 (1:45507805 T>C)
Disease associations
OMIM: gene MIM:609831 | disease phenotypes: MIM:277400, MIM:251000, MIM:277410
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| methylmalonic aciduria and homocystinuria type cblC | Definitive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| methylmalonic aciduria and homocystinuria type cblC | Definitive | AR |
Mondo (7): methylmalonic aciduria and homocystinuria type cblC (MONDO:0010184), atypical hemolytic-uremic syndrome (MONDO:0016244), methylmalonic aciduria and homocystinuria (MONDO:0016826), methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency (MONDO:0009612), methylmalonic aciduria and homocystinuria type cblD (MONDO:0010185), homocystinuria (MONDO:0004737), inherited retinal dystrophy (MONDO:0019118)
Orphanet (7): Methylmalonic acidemia with homocystinuria (Orphanet:26), Methylmalonic acidemia with homocystinuria, type cblC (Orphanet:79282), Atypical hemolytic uremic syndrome (Orphanet:2134), Vitamin B12-unresponsive methylmalonic acidemia (Orphanet:27), Homocystinuria without methylmalonic aciduria (Orphanet:622), Methylmalonic acidemia with homocystinuria, type cblD (Orphanet:79283), OBSOLETE: Inherited retinal disorder (Orphanet:71862)
HPO phenotypes
113 total (30 of 113 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000083 | Renal insufficiency |
| HP:0000093 | Proteinuria |
| HP:0000112 | Nephropathy |
| HP:0000206 | Glossitis |
| HP:0000238 | Hydrocephalus |
| HP:0000252 | Microcephaly |
| HP:0000276 | Long face |
| HP:0000319 | Smooth philtrum |
| HP:0000348 | High forehead |
| HP:0000369 | Low-set ears |
| HP:0000400 | Macrotia |
| HP:0000505 | Visual impairment |
| HP:0000546 | Retinal degeneration |
| HP:0000580 | Pigmentary retinopathy |
| HP:0000639 | Nystagmus |
| HP:0000648 | Optic atrophy |
| HP:0000707 | Abnormality of the nervous system |
| HP:0000708 | Atypical behavior |
| HP:0000709 | Psychosis |
| HP:0000726 | Dementia |
| HP:0000751 | Personality changes |
| HP:0000790 | Hematuria |
| HP:0000952 | Jaundice |
| HP:0000980 | Pallor |
| HP:0001116 | Macular pseudocoloboma |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
GWAS associations
16 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002087_8 | Homocysteine levels | 2.000000e-09 |
| GCST005950_15 | Body mass index x sex x age interaction (4df test) | 2.000000e-10 |
| GCST005951_56 | Body mass index | 1.000000e-06 |
| GCST005952_8 | Body mass index (age>50) | 9.000000e-12 |
| GCST005954_4 | Body mass index x age interaction | 2.000000e-07 |
| GCST006990_2 | Cerebrospinal AB1-42 levels in Alzheimer’s disease dementia | 3.000000e-07 |
| GCST007320_18 | Alzheimer’s disease or family history of Alzheimer’s disease | 7.000000e-25 |
| GCST007827_3 | Alzheimer’s disease or HDL levels (pleiotropy) | 1.000000e-97 |
| GCST007827_5 | Alzheimer’s disease or HDL levels (pleiotropy) | 7.000000e-74 |
| GCST007827_6 | Alzheimer’s disease or HDL levels (pleiotropy) | 7.000000e-54 |
| GCST007827_7 | Alzheimer’s disease or HDL levels (pleiotropy) | 5.000000e-50 |
| GCST007827_8 | Alzheimer’s disease or HDL levels (pleiotropy) | 3.000000e-36 |
| GCST007848_3 | LDL cholesterol | 6.000000e-30 |
| GCST008152_195 | Weight | 9.000000e-06 |
| GCST009496_8 | Alzheimer’s disease (onset between ages 58 and 79) | 3.000000e-11 |
| GCST010243_209 | Apolipoprotein B levels | 0.000000e+00 |
EFO canonical traits (10, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004578 | homocysteine measurement |
| EFO:0004340 | body mass index |
| EFO:0008007 | age at assessment |
| EFO:0008343 | sex interaction measurement |
| EFO:0004670 | beta-amyloid 1-42 measurement |
| EFO:0009268 | family history of Alzheimer’s disease |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:0004338 | body weight |
| EFO:0004615 | apolipoprotein B measurement |
MeSH disease descriptors (6)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065766 | Atypical Hemolytic Uremic Syndrome | C12.050.351.968.419.936.463.500; C12.200.777.419.936.463.500; C12.950.419.936.463.500; C15.378.050.141.610.500; C15.378.140.855.925.500.500; C15.378.243.937.925.500.500 |
| D006712 | Homocystinuria | C10.228.140.163.100.365; C16.320.565.100.480.500; C16.320.565.189.365; C17.300.428; C18.452.132.100.365; C18.452.648.100.480.500; C18.452.648.189.365 |
| D058499 | Retinal Dystrophies | C11.768.585.658 |
| C564743 | Methylmalonic Aciduria and Homocystinuria, CblD Type (supp.) | |
| C565390 | Methylmalonic Aciduria due to Methylmalonyl-CoA Mutase Deficiency (supp.) | |
| C537359 | Methylmalonic acidemia with homocystinuria (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
41 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, increases abundance, increases expression | 3 |
| (+)-JQ1 compound | decreases expression | 3 |
| Acetaminophen | decreases expression | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| Aflatoxin B1 | decreases expression, decreases methylation | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| aminomethylphosphonic acid (AMPA) | decreases expression | 1 |
| dicrotophos | increases expression | 1 |
| pirinixic acid | increases expression, affects binding, increases activity | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| isobutyl alcohol | affects cotreatment, decreases expression, increases abundance | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| cylindrospermopsin | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| abrine | decreases expression | 1 |
| NSC 689534 | affects binding, decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Arsenic | increases abundance, increases expression | 1 |
| Benzo(a)pyrene | decreases expression | 1 |
| Copper | affects binding, decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | decreases expression | 1 |
| Gasoline | affects cotreatment, decreases expression, increases abundance | 1 |
| Hydroxocobalamin | affects binding | 1 |
Cellosaurus cell lines
57 cell lines: 51 finite cell line, 4 cancer cell line, 2 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3WE | WG1070 | Finite cell line | |
| CVCL_B3WF | WG1127 | Finite cell line | |
| CVCL_B3WG | WG1129 | Finite cell line | |
| CVCL_B3WH | WG1135 | Finite cell line | |
| CVCL_B3WI | WG1391 | Finite cell line | |
| CVCL_B3WJ | WG1404 | Finite cell line | |
| CVCL_B3WK | WG1481 | Finite cell line | |
| CVCL_B3WL | WG1496 | Finite cell line | |
| CVCL_B3WQ | WG1692 | Finite cell line | |
| CVCL_B3WR | WG2339 | Finite cell line |
Clinical trials (associated diseases)
95 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02574403 | PHASE4 | COMPLETED | Study Assessing an Algorithm-based Strategy of Eculizumab Discontinuation in Children and Adults With aHUS |
| NCT07308574 | PHASE4 | RECRUITING | Post-Marketing Clinical Study of Ravulizumab in Participants With Clinical aHUS |
| NCT02949128 | PHASE3 | COMPLETED | Study of ALXN1210 in Complement Inhibitor Treatment-Naïve Adult and Adolescent Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT03131219 | PHASE3 | COMPLETED | Study of Ravulizumab in Children and Adolescents With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT03205995 | PHASE3 | TERMINATED | Safety and Efficacy Study of OMS721 in Patients With Atypical Hemolytic Uremic Syndrome |
| NCT04861259 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating the Efficacy, Safety, Pharmacokinetics and Pharmacodynamics of Crovalimab in Adult and Adolescent Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT04889430 | PHASE3 | COMPLETED | Efficacy and Safety of Iptacopan (LNP023) in Adult Patients With Atypical Hemolytic Uremic Syndrome Naive to Complement Inhibitor Therapy |
| NCT04958265 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating the Efficacy, Safety, Pharmacokinetics and Pharmacodynamics of Crovalimab in Pediatric Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT05795140 | PHASE3 | RECRUITING | Evaluate Long-term Safety, Tolerability and Efficacy of Iptacopan in Study Participants With aHUS |
| NCT05935215 | PHASE3 | RECRUITING | Efficacy and Safety of Switching From Anti-C5 Antibody Treatment to Iptacopan Treatment in Study Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT06247085 | PHASE3 | RECRUITING | A Study to Investigate Efficacy and Safety of Pegtibatinase Compared With Placebo in Participants ≥12 to ≤65 Years of Age With Classical Homocystinuria (HCU) Due to Cystathionine Beta Synthase Deficiency Receiving Standard of Care Treatment |
| NCT06431893 | PHASE3 | ENROLLING_BY_INVITATION | A Long-term Extension Study to Assess the Long-term Safety and Efficacy of Pegtibatinase Treatment in Participants ≥5 to ≤65 Years of Age With Classical Homocystinuria (HCU) (ENSEMBLE) |
| NCT04224207 | PHASE3 | COMPLETED | Management of Retinitis Pigmentosa by Mesenchymal Stem Cells by Wharton’s Jelly Derived Mesenchymal Stem Cells |
| NCT07082855 | PHASE3 | NOT_YET_RECRUITING | A Multicenter, Randomized, Double-Blind, Controlled Clinical Study of Minocycline for the Treatment of Retinitis Pigmentosa |
| NCT00838513 | PHASE2 | COMPLETED | Open Label Controlled Trial of Eculizumab in Adult Patients With Plasma Therapy-sensitive Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT00844428 | PHASE2 | COMPLETED | Open Label Controlled Trial of Eculizumab in Adolescent Patients With Plasma Therapy-Sensitive aHUS |
| NCT00844545 | PHASE2 | COMPLETED | Open Label Controlled Trial of Eculizumab in Adult Patients With Plasma Therapy-Resistant aHUS |
| NCT00844844 | PHASE2 | COMPLETED | Open Label Controlled Trial of Eculizumab in Adolescent Patients With Plasma Therapy-Resistant aHUS |
| NCT01193348 | PHASE2 | COMPLETED | An Open-Label, Multi-Center Clinical Trial of Eculizumab in Pediatric Patients With Atypical Hemolytic-Uremic Syndrome |
| NCT01194973 | PHASE2 | COMPLETED | An Open-label, Multi-center Clinical Trial of Eculizumab in Adult Patients With Atypical Hemolytic-uremic Syndrome |
| NCT01757431 | PHASE2 | COMPLETED | The Safety and Efficacy of Eculizumab in Japanese Patients With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT02464891 | PHASE2 | TERMINATED | Complement Inhibition in aHUS Dialysis Patients |
| NCT03303313 | PHASE2 | WITHDRAWN | A Study of an Investigational Drug, Cemdisiran (ALN-CC5), in Patients With Atypical Hemolytic Uremic Syndrome |
| NCT03518203 | PHASE2 | COMPLETED | Eculizumab to Treat Thrombotic Microangiopathy/Atypical Hemolytic Uremic Syndrome -Associated Multiple Organ Dysfunction Syndrome in Hematopoietic Stem Cell Transplant Recipients |
| NCT03999840 | PHASE2 | WITHDRAWN | Eculizumab to Cemdisiran Switch in aHUS |
| NCT04725812 | PHASE2 | TERMINATED | Complement Regulation to Undo Systemic Harm in Preeclampsia |
| NCT00483314 | PHASE2 | COMPLETED | Homocystinuria: Treatment With N-Acetylcysteine |
| NCT02404337 | PHASE2 | COMPLETED | Betaine METABOLISM OF PATIENTS With Homocystinuria |
| NCT03763227 | PHASE2 | COMPLETED | Intravitreal Ranibizumab (Lucentis®) in the Treatment of Non-leaking Macular Cysts in Retinal Dystrophy |
| NCT04068207 | PHASE2 | COMPLETED | Minocycline Treatment in Retinitis Pigmentosa |
| NCT04945772 | PHASE2 | COMPLETED | Efficacy and Safety of MCO-010 Optogenetic Therapy in Adults With Retinitis Pigmentosa [RESTORE] |
| NCT05462132 | PHASE1 | COMPLETED | Safety, Tolerability and Pharmacodynamics of SYNB1353 in Healthy Adult Volunteers |
| NCT05902962 | PHASE1 | COMPLETED | SAD of IVT VP-001 in PRPF31 Mutation-Associated Retinal Dystrophy Subjects |
| NCT06319872 | PHASE1 | RECRUITING | The Effects of Disulfiram (Antabuse®) on Visual Acuity in Patients With Retinal Degeneration |
| NCT06455826 | PHASE1 | COMPLETED | MAD of IVT VP-001 in PRPF31 Mutation-Associated Retinal Dystrophy Subjects (Wallaby) |
| NCT03655223 | Not specified | ENROLLING_BY_INVITATION | Early Check: Expanded Screening in Newborns |
| NCT01522170 | Not specified | TERMINATED | aHUS Observational Long Term Follow-Up |
| NCT01522183 | Not specified | RECRUITING | Atypical Hemolytic-Uremic Syndrome (aHUS) Registry |
| NCT01755429 | Not specified | COMPLETED | To Characterize the Safety and Tolerability of Eculizumab in Two Japanese aHUS Patients |
| NCT01770951 | Not specified | COMPLETED | A Retrospective, Observational, Non-interventional Trial to Assess Eculizumab Treatment Effect in Patients With Atypical Hemolytic Uremic Syndrome (aHUS) |
Related Atlas pages
- Associated diseases: methylmalonic aciduria and homocystinuria type cblC
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): atypical hemolytic-uremic syndrome, homocystinuria, methylmalonic aciduria and homocystinuria, methylmalonic aciduria and homocystinuria type cblC, methylmalonic aciduria and homocystinuria type cblD, methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency