MPI
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Summary
MPI (mannose phosphate isomerase, HGNC:7216) is a protein-coding gene on chromosome 15q24.1, encoding Mannose-6-phosphate isomerase (P34949). Isomerase that catalyzes the interconversion of fructose-6-P and mannose-6-P and has a critical role in the supply of D-mannose derivatives required for many eukaryotic glycosylation reactions.
Phosphomannose isomerase catalyzes the interconversion of fructose-6-phosphate and mannose-6-phosphate and plays a critical role in maintaining the supply of D-mannose derivatives, which are required for most glycosylation reactions. Mutations in the MPI gene were found in patients with carbohydrate-deficient glycoprotein syndrome, type Ib. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 4351 — RefSeq curated summary.
At a glance
- Gene–disease (curated): MPI-congenital disorder of glycosylation (Definitive, ClinGen)
- GWAS associations: 20
- Clinical variants (ClinVar): 614 total — 37 pathogenic, 86 likely-pathogenic
- Phenotypes (HPO): 38
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_002435
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7216 |
| Approved symbol | MPI |
| Name | mannose phosphate isomerase |
| Location | 15q24.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000178802 |
| Ensembl biotype | protein_coding |
| OMIM | 154550 |
| Entrez | 4351 |
Gene structure
Transcript identifiers
Ensembl transcripts: 27 — 21 protein_coding, 4 retained_intron, 1 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000323744, ENST00000352410, ENST00000535694, ENST00000561470, ENST00000562606, ENST00000562800, ENST00000563422, ENST00000563786, ENST00000564003, ENST00000564633, ENST00000564692, ENST00000565576, ENST00000566377, ENST00000566556, ENST00000567116, ENST00000567132, ENST00000567177, ENST00000567570, ENST00000568303, ENST00000568828, ENST00000568840, ENST00000568907, ENST00000569233, ENST00000569931, ENST00000897793, ENST00000940246, ENST00000967445
RefSeq mRNA: 5 — MANE Select: NM_002435
NM_001289155, NM_001289156, NM_001289157, NM_001330372, NM_002435
CCDS: CCDS10272, CCDS73756, CCDS73757, CCDS73758, CCDS81908
Canonical transcript exons
ENST00000352410 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001245539 | 74897011 | 74897219 |
| ENSE00001245546 | 74896152 | 74896325 |
| ENSE00001816780 | 74897512 | 74902219 |
| ENSE00003468114 | 74892661 | 74892802 |
| ENSE00003476529 | 74890527 | 74890654 |
| ENSE00003507946 | 74890042 | 74890089 |
| ENSE00003620329 | 74891379 | 74891579 |
| ENSE00003622704 | 74893138 | 74893320 |
Expression profiles
Bgee: expression breadth ubiquitous, 244 present calls, max score 95.26.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 22.6045 / max 112.2348, expressed in 1782 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 147742 | 22.6045 | 1782 |
Top tissues by expression
283 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| apex of heart | UBERON:0002098 | 95.26 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.12 | gold quality |
| right adrenal gland | UBERON:0001233 | 95.02 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 94.49 | gold quality |
| left adrenal gland | UBERON:0001234 | 94.09 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 93.74 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 93.38 | gold quality |
| prefrontal cortex | UBERON:0000451 | 93.22 | gold quality |
| right frontal lobe | UBERON:0002810 | 93.20 | gold quality |
| cingulate cortex | UBERON:0003027 | 92.91 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 92.87 | gold quality |
| adrenal gland | UBERON:0002369 | 92.58 | gold quality |
| ventricular zone | UBERON:0003053 | 92.42 | gold quality |
| rectum | UBERON:0001052 | 92.33 | gold quality |
| colonic epithelium | UBERON:0000397 | 92.24 | gold quality |
| right atrium auricular region | UBERON:0006631 | 92.22 | gold quality |
| adrenal tissue | UBERON:0018303 | 92.04 | gold quality |
| gastrocnemius | UBERON:0001388 | 91.94 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 91.90 | gold quality |
| adrenal cortex | UBERON:0001235 | 91.78 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 91.74 | gold quality |
| muscle of leg | UBERON:0001383 | 91.63 | gold quality |
| heart left ventricle | UBERON:0002084 | 91.52 | gold quality |
| gall bladder | UBERON:0002110 | 91.45 | gold quality |
| transverse colon | UBERON:0001157 | 91.33 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 91.33 | gold quality |
| cardiac ventricle | UBERON:0002082 | 90.85 | gold quality |
| right lobe of liver | UBERON:0001114 | 90.80 | gold quality |
| right ovary | UBERON:0002118 | 90.80 | gold quality |
| right uterine tube | UBERON:0001302 | 90.72 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.89 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
76 targeting MPI, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4455 | 100.00 | 65.48 | 1587 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-6758-5P | 100.00 | 66.21 | 1470 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-3617-3P | 99.98 | 67.86 | 918 |
| HSA-MIR-4267 | 99.96 | 66.53 | 2368 |
| HSA-MIR-6772-5P | 99.94 | 67.01 | 577 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-1273H-5P | 99.77 | 66.32 | 2471 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-1825 | 99.72 | 68.11 | 1089 |
| HSA-MIR-30B-3P | 99.70 | 65.76 | 2325 |
| HSA-MIR-3689A-3P | 99.70 | 65.73 | 2306 |
| HSA-MIR-3689B-3P | 99.70 | 65.71 | 2311 |
| HSA-MIR-3689C | 99.70 | 65.71 | 2311 |
| HSA-MIR-6779-5P | 99.70 | 65.76 | 2363 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-5093 | 99.67 | 69.26 | 2291 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-4690-5P | 99.65 | 66.24 | 813 |
| HSA-MIR-6715B-5P | 99.64 | 69.63 | 1420 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4663 | 99.62 | 65.33 | 957 |
| HSA-MIR-24-3P | 99.59 | 69.97 | 1934 |
Literature-anchored findings (GeneRIF, showing 6)
- The mannose-6-phosphate-enzyme complex is developed and the key residues involved in the ligand binding are determined. Our results suggest a hydride transfer mechanism of alpha-hydrogen between the C1 and C2 positions. (PMID:16488169)
- Phosphomannose isomerase inhibitors improve N-glycosylation in selected phosphomannomutase-deficient fibroblasts (PMID:21949237)
- This work provides mechanistic evidence by which mannose phosphate isomerase loss induces p53, and identifies mannose phosphate isomerase as a novel regulator of p53 and Warburg metabolism. (PMID:28644127)
- MPI loss is a driver of liver fibrosis and suggest that modulating mannose metabolism pathways could reduce hepatic stellate cell activation and improve hepatic fibrosis. (PMID:31016744)
- MPI-based bioinformatic analysis and co-inhibitory therapy with mannose for oral squamous cell carcinoma. (PMID:34313879)
- Selective Immobilization of His-Tagged Phosphomannose Isomerase on Ni Chelated Nanoparticles with Good Reusability and Activity. (PMID:34958513)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | mpi | ENSDARG00000030786 |
| mus_musculus | Mpi | ENSMUSG00000032306 |
| rattus_norvegicus | Mpi | ENSRNOG00000018898 |
| drosophila_melanogaster | Mpi | FBGN0286506 |
| caenorhabditis_elegans | WBGENE00014013 | |
| caenorhabditis_elegans | WBGENE00015464 |
Protein
Protein identifiers
Mannose-6-phosphate isomerase — P34949 (reviewed: P34949)
Alternative names: Phosphohexomutase, Phosphomannose isomerase
All UniProt accessions (18): B4DYB8, P34949, F5GX71, H3BM77, H3BMZ9, H3BN01, H3BNY8, H3BP57, H3BPB8, H3BPM5, H3BPP3, H3BPU7, H3BQX0, H3BT46, H3BT48, H3BU66, H3BUG1, H3BUZ9
UniProt curated annotations — full annotation on UniProt →
Function. Isomerase that catalyzes the interconversion of fructose-6-P and mannose-6-P and has a critical role in the supply of D-mannose derivatives required for many eukaryotic glycosylation reactions.
Subcellular location. Cytoplasm.
Tissue specificity. Expressed in all tissues, but more abundant in heart, brain and skeletal muscle.
Disease relevance. Congenital disorder of glycosylation 1B (CDG1B) [MIM:602579] A form of congenital disorder of glycosylation, a multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG1B is clinically characterized by protein-losing enteropathy. The disease is caused by variants affecting the gene represented in this entry.
Cofactor. Binds 1 zinc ion per subunit.
Pathway. Nucleotide-sugar biosynthesis; GDP-alpha-D-mannose biosynthesis; alpha-D-mannose 1-phosphate from D-fructose 6-phosphate: step 1/2.
Similarity. Belongs to the mannose-6-phosphate isomerase type 1 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P34949-1 | 1 | yes |
| P34949-2 | 2 |
RefSeq proteins (5): NP_001276084, NP_001276085, NP_001276086, NP_001317301, NP_002426* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001250 | Man6P_Isoase-1 | Family |
| IPR011051 | RmlC_Cupin_sf | Homologous_superfamily |
| IPR014710 | RmlC-like_jellyroll | Homologous_superfamily |
| IPR016305 | Mannose-6-P_Isomerase | Family |
| IPR018050 | Pmannose_isomerase-type1_CS | Conserved_site |
| IPR046456 | PMI_typeI_C | Domain |
| IPR046457 | PMI_typeI_cat | Domain |
| IPR046458 | PMI_typeI_hel | Domain |
Pfam: PF01238, PF20511, PF20512
Catalyzed reactions (Rhea), 1 shown:
- D-mannose 6-phosphate = D-fructose 6-phosphate (RHEA:12356)
UniProt features (24 total): sequence variant 13, binding site 4, modified residue 3, initiator methionine 1, chain 1, splice variant 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P34949-F1 | 96.50 | 0.97 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 295
Ligand- & substrate-binding residues (4): 110; 112; 137; 276
Post-translational modifications (3): 2, 102, 108
Function
Pathways and Gene Ontology
Reactome pathways
11 pathways
| ID | Pathway |
|---|---|
| R-HSA-4043916 | Defective MPI causes MPI-CDG |
| R-HSA-446205 | Synthesis of GDP-mannose |
| R-HSA-1643685 | Disease |
| R-HSA-3781865 | Diseases of glycosylation |
| R-HSA-392499 | Metabolism of proteins |
| R-HSA-446193 | Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
| R-HSA-446203 | Asparagine N-linked glycosylation |
| R-HSA-446219 | Synthesis of substrates in N-glycan biosythesis |
| R-HSA-5609975 | Diseases associated with glycosylation precursor biosynthesis |
| R-HSA-5668914 | Diseases of metabolism |
| R-HSA-597592 | Post-translational protein modification |
MSigDB gene sets: 225 (showing top):
GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_DN, STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, GOBP_MONOSACCHARIDE_CATABOLIC_PROCESS, AACYNNNNTTCCS_UNKNOWN, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_NUCLEOSIDE_PHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_ORGANOPHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, GOBP_CARBOHYDRATE_DERIVATIVE_BIOSYNTHETIC_PROCESS, BROWNE_HCMV_INFECTION_14HR_DN, SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_UP, GOBP_CARBOHYDRATE_METABOLIC_PROCESS, WINTER_HYPOXIA_METAGENE, GOBP_SMALL_MOLECULE_CATABOLIC_PROCESS
GO Biological Process (4): GDP-mannose biosynthetic process (GO:0009298), mannose to fructose-6-phosphate catabolic process (GO:0061611), obsolete GDP-D-mannose biosynthetic process from fructose-6-phosphate (GO:0061729), carbohydrate metabolic process (GO:0005975)
GO Molecular Function (5): mannose-6-phosphate isomerase activity (GO:0004476), zinc ion binding (GO:0008270), protein binding (GO:0005515), isomerase activity (GO:0016853), metal ion binding (GO:0046872)
GO Cellular Component (3): cytosol (GO:0005829), extracellular exosome (GO:0070062), cytoplasm (GO:0005737)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Diseases associated with glycosylation precursor biosynthesis | 1 |
| Synthesis of substrates in N-glycan biosythesis | 1 |
| Diseases of metabolism | 1 |
| Asparagine N-linked glycosylation | 1 |
| Post-translational protein modification | 1 |
| Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein | 1 |
| Diseases of glycosylation | 1 |
| Disease | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| phosphomannomutase activity | 1 |
| nucleotide-sugar biosynthetic process | 1 |
| GDP-mannose metabolic process | 1 |
| mannose-6-phosphate isomerase activity | 1 |
| fructose 6-phosphate metabolic process | 1 |
| mannokinase activity | 1 |
| mannose catabolic process | 1 |
| primary metabolic process | 1 |
| intramolecular oxidoreductase activity, interconverting aldoses and ketoses | 1 |
| transition metal ion binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| cytoplasm | 1 |
| extracellular vesicle | 1 |
| intracellular anatomical structure | 1 |
Protein interactions and networks
STRING
1594 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MPI | PMM2 | O15305 | 955 |
| MPI | GPI | P06744 | 933 |
| MPI | SRD5A3 | Q9H8P0 | 859 |
| MPI | H6PD | O95479 | 789 |
| MPI | G6PD | P11413 | 787 |
| MPI | PGD | P52209 | 775 |
| MPI | GUSB | P08236 | 758 |
| MPI | ALG12 | Q9BV10 | 704 |
| MPI | SERPINC1 | P01008 | 671 |
| MPI | GALE | Q14376 | 641 |
| MPI | GMPPB | Q9Y5P6 | 627 |
| MPI | PGM1 | P36871 | 612 |
| MPI | GMPPA | Q96IJ6 | 582 |
| MPI | PGM3 | O95394 | 565 |
| MPI | ALG2 | Q9H553 | 563 |
IntAct
16 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CPNE8 | MPI | psi-mi:“MI:0915”(physical association) | 0.400 |
| NP | MPI | psi-mi:“MI:0915”(physical association) | 0.370 |
| MPI | BDKRB2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MPI | CFTR | psi-mi:“MI:0915”(physical association) | 0.370 |
| KSR1 | FBLL1 | psi-mi:“MI:0914”(association) | 0.350 |
| SAR1B | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| P2RY10 | POTEF | psi-mi:“MI:0914”(association) | 0.350 |
| MPI | SERPINA3 | psi-mi:“MI:0914”(association) | 0.350 |
| ANLN | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| SERBP1 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| OPTN | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| STING1 | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| MAGEF1 | SMCHD1 | psi-mi:“MI:0914”(association) | 0.350 |
| CFAP263 | SPTBN2 | psi-mi:“MI:0914”(association) | 0.350 |
| MPI | ADA | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (61): TGM1 (Affinity Capture-MS), IVL (Affinity Capture-MS), S100A14 (Affinity Capture-MS), MIF (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), MPI (Co-fractionation), NECAP1 (Co-fractionation), NECAP2 (Co-fractionation)
ESM2 similar proteins: A2VDC2, A5A6K3, D4AAT7, O35952, P00937, P34949, P40939, Q01415, Q08B22, Q09669, Q1PEY5, Q1ZXF1, Q28C91, Q28FR6, Q29554, Q2HJ73, Q2TAA5, Q3KRD0, Q3TZM9, Q42942, Q55GS6, Q561R9, Q58EB4, Q5EAD2, Q5F4K8, Q5HZQ8, Q5R6J8, Q5R7Z6, Q5XF59, Q5XIE6, Q5ZJ60, Q61753, Q64428, Q68FH4, Q68FX1, Q6NMB0, Q6NVY1, Q6PI48, Q84MD8, Q8BIP0
Diamond homologs: A5A6K3, O43014, P00946, P25081, P29951, P29952, P34650, P34948, P34949, Q3SZI0, Q54PA0, Q66WM4, Q68FX1, Q75AB5, Q76IQ2, Q83KZ1, Q870Y1, Q8HXX2, Q8J093, Q924M7, Q9FZH5, Q9GP38, Q9HFU4, Q9M884
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
614 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 37 |
| Likely pathogenic | 86 |
| Uncertain significance | 139 |
| Likely benign | 280 |
| Benign | 12 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1071838 | NM_002435.3(MPI):c.1034dup (p.Thr346fs) | Pathogenic |
| 1366385 | NM_002435.3(MPI):c.820dup (p.Val274fs) | Pathogenic |
| 1367639 | NM_002435.3(MPI):c.335_338del (p.His112fs) | Pathogenic |
| 1370035 | NM_002435.3(MPI):c.753del (p.Phe252fs) | Pathogenic |
| 1376774 | NM_002435.3(MPI):c.150G>A (p.Trp50Ter) | Pathogenic |
| 1412273 | NM_002435.3(MPI):c.647_650del (p.Leu215_Leu216insTer) | Pathogenic |
| 14345 | NM_002435.3(MPI):c.656G>A (p.Arg219Gln) | Pathogenic |
| 1444990 | NM_002435.3(MPI):c.745dup (p.Ile249fs) | Pathogenic |
| 1451527 | NM_002435.3(MPI):c.1053+2T>C | Pathogenic |
| 1457290 | NM_002435.3(MPI):c.264del (p.Asp88fs) | Pathogenic |
| 188967 | NM_002435.3(MPI):c.166dup (p.Arg56fs) | Pathogenic |
| 1961516 | NM_002435.3(MPI):c.613G>T (p.Glu205Ter) | Pathogenic |
| 2015644 | NM_002435.3(MPI):c.1006_1007del (p.Ser336fs) | Pathogenic |
| 2056193 | NM_002435.3(MPI):c.764_776del (p.Tyr255fs) | Pathogenic |
| 2086713 | NM_002435.3(MPI):c.706dup (p.Glu236fs) | Pathogenic |
| 2109971 | NM_002435.3(MPI):c.1137_1140del (p.Ser380fs) | Pathogenic |
| 2174331 | NM_002435.3(MPI):c.989_1005dup (p.Ser336fs) | Pathogenic |
| 218094 | NM_002435.3(MPI):c.1205A>G (p.Glu402Gly) | Pathogenic |
| 2735509 | NM_002435.3(MPI):c.206del (p.Lys69fs) | Pathogenic |
| 2743321 | NM_002435.3(MPI):c.612_615del (p.Ser204fs) | Pathogenic |
| 2744685 | NM_002435.3(MPI):c.43_44insCTGGGGGA (p.Gln15fs) | Pathogenic |
| 2750988 | NM_002435.3(MPI):c.490del (p.Val164fs) | Pathogenic |
| 2759540 | NM_002435.3(MPI):c.1166del (p.Pro389fs) | Pathogenic |
| 2769293 | NM_002435.3(MPI):c.43C>T (p.Gln15Ter) | Pathogenic |
| 2772652 | NM_002435.3(MPI):c.65del (p.Gly22fs) | Pathogenic |
| 2802194 | NM_002435.3(MPI):c.1058del (p.Pro353fs) | Pathogenic |
| 2817891 | NM_002435.3(MPI):c.751del (p.Cys251fs) | Pathogenic |
| 2823076 | NM_002435.3(MPI):c.370dup (p.Gln124fs) | Pathogenic |
| 2824025 | NM_002435.3(MPI):c.222G>A (p.Trp74Ter) | Pathogenic |
| 2837872 | NM_002435.3(MPI):c.44del (p.Gln15fs) | Pathogenic |
SpliceAI
1805 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 15:74890525:A:AG | acceptor_gain | 1.0000 |
| 15:74890526:G:GG | acceptor_gain | 1.0000 |
| 15:74890652:GAG:G | donor_gain | 1.0000 |
| 15:74890655:G:GA | donor_loss | 1.0000 |
| 15:74890656:T:A | donor_loss | 1.0000 |
| 15:74892647:T:TA | acceptor_gain | 1.0000 |
| 15:74892648:G:A | acceptor_gain | 1.0000 |
| 15:74892653:C:G | acceptor_gain | 1.0000 |
| 15:74892656:CACA:C | acceptor_loss | 1.0000 |
| 15:74892657:ACAG:A | acceptor_gain | 1.0000 |
| 15:74892658:CA:C | acceptor_loss | 1.0000 |
| 15:74892659:A:AG | acceptor_gain | 1.0000 |
| 15:74892659:AG:A | acceptor_gain | 1.0000 |
| 15:74892660:G:GA | acceptor_gain | 1.0000 |
| 15:74892660:GG:G | acceptor_gain | 1.0000 |
| 15:74892660:GGA:G | acceptor_gain | 1.0000 |
| 15:74892776:T:G | donor_gain | 1.0000 |
| 15:74892799:AAGA:A | donor_gain | 1.0000 |
| 15:74892800:AGA:A | donor_gain | 1.0000 |
| 15:74892801:GA:G | donor_gain | 1.0000 |
| 15:74892801:GAG:G | donor_gain | 1.0000 |
| 15:74892801:GAGT:G | donor_loss | 1.0000 |
| 15:74892802:AGTA:A | donor_loss | 1.0000 |
| 15:74892803:G:GG | donor_gain | 1.0000 |
| 15:74892803:GT:G | donor_loss | 1.0000 |
| 15:74893136:A:AG | acceptor_gain | 1.0000 |
| 15:74893137:G:GG | acceptor_gain | 1.0000 |
| 15:74893331:T:G | donor_gain | 1.0000 |
| 15:74890526:GT:G | acceptor_gain | 0.9900 |
| 15:74890526:GTA:G | acceptor_gain | 0.9900 |
AlphaMissense
2776 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 15:74891568:C:G | H112D | 0.998 |
| 15:74892720:G:C | K135N | 0.998 |
| 15:74892720:G:T | K135N | 0.998 |
| 15:74890562:T:A | W18R | 0.997 |
| 15:74890562:T:C | W18R | 0.997 |
| 15:74891530:A:T | K99I | 0.997 |
| 15:74897047:T:A | V294D | 0.997 |
| 15:74891531:A:C | K99N | 0.996 |
| 15:74891531:A:T | K99N | 0.996 |
| 15:74891570:C:A | H112Q | 0.996 |
| 15:74891570:C:G | H112Q | 0.996 |
| 15:74892718:A:G | K135E | 0.996 |
| 15:74896307:C:G | H276D | 0.996 |
| 15:74896310:G:C | A277P | 0.996 |
| 15:74897042:C:A | N292K | 0.996 |
| 15:74897042:C:G | N292K | 0.996 |
| 15:74897050:G:C | R295P | 0.996 |
| 15:74897199:T:C | F345L | 0.996 |
| 15:74897201:C:A | F345L | 0.996 |
| 15:74897201:C:G | F345L | 0.996 |
| 15:74897711:G:C | R418P | 0.996 |
| 15:74890564:G:C | W18C | 0.995 |
| 15:74890564:G:T | W18C | 0.995 |
| 15:74891382:T:A | W50R | 0.995 |
| 15:74891382:T:C | W50R | 0.995 |
| 15:74892726:G:C | E137D | 0.995 |
| 15:74892726:G:T | E137D | 0.995 |
| 15:74892767:T:C | F151S | 0.995 |
| 15:74897049:C:A | R295S | 0.995 |
| 15:74890654:G:C | E48D | 0.994 |
dbSNP variants (sampled 300 via entrez): RS1000271905 (15:74902662 CAGCAGG>C), RS1000475684 (15:74890514 T>C), RS1000757267 (15:74897104 G>C), RS1000961058 (15:74898246 A>G), RS1001297444 (15:74891519 C>T), RS1001668310 (15:74889568 C>T), RS1001707559 (15:74895286 C>A), RS1001715109 (15:74901620 G>A), RS1001753261 (15:74895544 G>A), RS1002114464 (15:74890763 G>A,C), RS1002184562 (15:74892146 A>G), RS1002632170 (15:74895682 G>A), RS1002640680 (15:74902318 G>A,C), RS1002704783 (15:74899862 C>G), RS1002733968 (15:74901965 A>C)
Disease associations
OMIM: gene MIM:154550 | disease phenotypes: MIM:602579
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| MPI-congenital disorder of glycosylation | Definitive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| MPI-congenital disorder of glycosylation | Definitive | AR |
Mondo (1): MPI-congenital disorder of glycosylation (MONDO:0011257)
Orphanet (1): MPI-CDG (Orphanet:79319)
HPO phenotypes
38 total (30 of 38 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000107 | Renal cyst |
| HP:0000114 | Proximal tubulopathy |
| HP:0000707 | Abnormality of the nervous system |
| HP:0000821 | Hypothyroidism |
| HP:0000825 | Hyperinsulinemic hypoglycemia |
| HP:0000969 | Edema |
| HP:0001249 | Intellectual disability |
| HP:0001252 | Hypotonia |
| HP:0001290 | Generalized hypotonia |
| HP:0001394 | Cirrhosis |
| HP:0001395 | Hepatic fibrosis |
| HP:0001399 | Hepatic failure |
| HP:0001409 | Portal hypertension |
| HP:0001410 | Decreased liver function |
| HP:0001508 | Failure to thrive |
| HP:0001892 | Abnormal bleeding |
| HP:0001929 | Reduced factor XI activity |
| HP:0001976 | Reduced antithrombin III activity |
| HP:0001977 | Abnormal thrombosis |
| HP:0002013 | Vomiting |
| HP:0002014 | Diarrhea |
| HP:0002239 | Gastrointestinal hemorrhage |
| HP:0002240 | Hepatomegaly |
| HP:0002243 | Protein-losing enteropathy |
| HP:0002570 | Steatorrhea |
| HP:0003073 | Hypoalbuminemia |
| HP:0003256 | Abnormality of the coagulation cascade |
| HP:0003593 | Infantile onset |
| HP:0003642 | Type I transferrin isoform profile |
GWAS associations
20 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006190_13 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 3.000000e-16 |
| GCST006190_2 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 8.000000e-21 |
| GCST006190_53 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 1.000000e-21 |
| GCST006190_83 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 7.000000e-25 |
| GCST006192_50 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 5.000000e-15 |
| GCST006192_57 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-18 |
| GCST006192_73 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 1.000000e-12 |
| GCST006192_84 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-13 |
| GCST006193_35 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 2.000000e-24 |
| GCST006193_46 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 1.000000e-18 |
| GCST006193_74 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 4.000000e-24 |
| GCST006193_84 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 3.000000e-27 |
| GCST006195_17 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 1.000000e-16 |
| GCST006195_35 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 2.000000e-15 |
| GCST006195_66 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 3.000000e-15 |
| GCST006195_76 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 4.000000e-20 |
| GCST006231_65 | Mean arterial pressure | 2.000000e-15 |
| GCST010796_5099 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-09 |
| GCST010796_5100 | Electrocardiogram morphology (amplitude at temporal datapoints) | 6.000000e-09 |
| GCST90002404_369 | Red cell distribution width | 1.000000e-11 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0006336 | diastolic blood pressure |
| EFO:0006527 | smoking status measurement |
| EFO:0006335 | systolic blood pressure |
| EFO:0006340 | mean arterial pressure |
| EFO:0004327 | electrocardiography |
| EFO:0009188 | Red cell distribution width |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C535740 | Congenital disorder of glycosylation type 1B (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2758 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 18,515 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3187985 | APOMORPHINE HYDROCHLORIDE | 4 | 5,278 |
| CHEMBL51085 | EBSELEN | 3 | 13,237 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
322 measured of 684 human assays (720 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| 2,6,7-trihydroxy-9-(2,4,5-trimethoxyphenyl)-3-xanthenone | EC50 | 258 nM |
| 1,4-diketo-3-(4-methoxyphenyl)naphthalene-2-carboxylic acid ethyl ester | IC50 | 322 nM |
| 2-methylbenzo-1,4-quinone 4-[O-(3,4,5-trimethoxybenzoyl)oxime] | IC50 | 623 nM |
| 2-(4-fluorophenyl)-4,6-dinitro-1,2-benzothiazol-3-one | IC50 | 709 nM |
| (4E)-4-[[2-[2-(3,5-dimethylpyrazol-1-yl)-6-methyl-pyrimidin-4-yl]hydrazinyl]methylidene]-3-oxidanyl-cyclohexa-2,5-dien-1-one | EC50 | 831 nM |
| (Z)-(4-chlorodithiazol-5-ylidene)-(5-methyl-1,3,4-oxadiazol-2-yl)amine | IC50 | 1070 nM |
| 5-hydroxy-4-[[4-(2-hydroxyethyl)-1-piperazinyl]methyl]-2-methyl-3-benzo[g]benzofurancarboxylic acid ethyl ester | IC50 | 1130 nM |
| 1-ethyl-5-methyl-4-[(phenylsulfonyl)methyl]-1,3-dihydro-2H-imidazol-2-one | IC50 | 1230 nM |
| 2-(2-fluorophenyl)-4,6-dinitro-1,2-benzothiazol-3-one | IC50 | 1450 nM |
| MLS000392355 | IC50 | 1490 nM |
| MLS-0315804.0001 | IC50 | 1590 nM |
| 1,3,6-Trimethyl-1H-pyrimido[5,4-e][1,2,4]triazine-5,7-dione | EC50 | 1610 nM |
| 1,6-dimethyl-3-propyl-pyrimido[5,4-e][1,2,4]triazine-5,7-dione | EC50 | 1770 nM |
| 2-(4-chlorophenyl)-5-fluoranyl-1,2-benzothiazol-3-one | IC50 | 1770 nM |
| (4E)-4-[[[4-(2-furanyl)-2-(2-methoxyethylimino)-3-thiazolyl]amino]methylidene]-2,3-dihydroxy-1-cyclohexa-2,5-dienone | EC50 | 1810 nM |
| 5-(3-chlorophenyl)-1,2-dihydro-1,2,4-triazole-3-thione | IC50 | 1940 nM |
| 5-amino-N’-(4-chlorobenzylidene)-4-oxo-3-phenyl-3,4-dihydrothieno[3,4-d]pyridazine-1-carbohydrazide | IC50 | 1950 nM |
| MLS000548244 | IC50 | 2100 nM |
| 2-[4-[chloranyl-bis(fluoranyl)methoxy]phenyl]-4,6-dinitro-1,2-benzothiazol-3-one | IC50 | 2140 nM |
| (Z)-(4-chlorodithiazol-5-ylidene)-(1,3,4-thiadiazol-2-yl)amine | IC50 | 2300 nM |
| 3-[3-(3-bromophenyl)-4-[(4,6-diketo-2-thioxo-hexahydropyrimidin-5-ylidene)methyl]pyrazol-1-yl]propionic acid | IC50 | 2390 nM |
| 2-(4-chlorophenyl)-1,2-benzothiazol-3-one | IC50 | 2450 nM |
| 4-bromanyl-2-(4-methoxyphenyl)-6-methyl-benzotriazol-5-amine | IC50 | 2530 nM |
| 1-[[1-(4-methoxyphenyl)-3-pyrrolidinyl]methyl]-3-phenylurea | IC50 | 2580 nM |
| (3-chloro-4-ethoxy-5-methoxy-benzyl)-(4-pyrrolidinophenyl)amine | IC50 | 2690 nM |
| MLS000121202 | IC50 | 2710 nM |
| MLS000684518 | IC50 | 2720 nM |
| 2-[(6,7-dihydroxy-2-keto-chromen-4-yl)methylthio]-3-(3-methoxyphenyl)quinazolin-4-one | IC50 | 2720 nM |
| (4E)-2,3-dihydroxy-4-[[(4-methyl-2-methylimino-1,3-thiazol-3-yl)amino]methylidene]cyclohexa-2,5-dien-1-one | IC50 | 2720 nM |
| 7-[[4-(2-hydroxyethyl)-1-piperazinyl]-thiophen-2-ylmethyl]-8-quinolinol | IC50 | 2820 nM |
| 2-(3-chloranyl-2-methyl-phenyl)-6-nitro-4-[2,2,2-tris(fluoranyl)ethoxy]-1,2-benzothiazol-3-one | IC50 | 3030 nM |
| 2-(4-bromophenyl)-3-ethanoyl-naphthalene-1,4-dione | IC50 | 3130 nM |
| 1-(3-methoxyphenyl)-3-[[1-(4-methoxyphenyl)-3-pyrrolidinyl]methyl]urea | IC50 | 3180 nM |
| (4-chlorodithiazol-5-ylidene)-(2-methoxy-4-nitro-phenyl)amine | IC50 | 3250 nM |
| 2-(3-chlorophenyl)-1,2-benzothiazol-3-one | IC50 | 3430 nM |
| (+)-haematoxylin | IC50 | 3440 nM |
| (4-chlorodithiazol-5-ylidene)-(2,4-dinitrophenyl)amine | IC50 | 3520 nM |
| MLS000759648 | IC50 | 3520 nM |
| 2,6,7-Trihydroxy-9-methyl-xanthen-3-one | IC50 | 3600 nM |
| (3-chloro-4,5-dimethoxy-benzyl)-(4-pyrrolidinophenyl)amine | EC50 | 3720 nM |
| MLS000571067 | IC50 | 3730 nM |
| 6,7-bis(oxidanyl)-4-[[5-(3,4,5-trimethoxyphenyl)-1,3,4-oxadiazol-2-yl]sulfanylmethyl]chromen-2-one | IC50 | 3770 nM |
| 5-Amino-4-cyano-3-methyl-thiophene-2-carboxylic acid [5-(2-nitro-phenyl)-furan-2-ylmethylene]-hydrazide | IC50 | 3780 nM |
| 5-(2,3-dihydro-1,4-benzodioxin-3-yl)-1,2-dihydro-1,2,4-triazole-3-thione | IC50 | 3890 nM |
| 4-[(3-carbethoxy-5-hydroxy-2-methyl-benzo[g]benzofuran-4-yl)methyl]piperazine-1-carboxylic acid ethyl ester | IC50 | 3950 nM |
| SMR000152103 | IC50 | 4090 nM |
| 4-[(4-chloranyl-1,2,3-dithiazol-5-ylidene)amino]benzenecarbonitrile | IC50 | 4140 nM |
| 5-[(6-Bromo-2-hydroxy-naphthalen-1-ylmethylene)-amino]-1,3-dihydro-benzoimidazol-2-one | EC50 | 4150 nM |
| 2-(3-methoxyphenyl)-1,2-benzothiazol-3-one | IC50 | 4190 nM |
| 3,4,5-trihydroxy-N’-((1E)-{4-methoxy-3-[(4-nitro-1H-pyrazol-1-yl)methyl]phenyl}methylene)benzohydrazide | IC50 | 4310 nM |
ChEMBL bioactivities
170 potent at pChembl≥5 of 395 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.72 | IC50 | 190 | nM | EBSELEN |
| 6.57 | IC50 | 270 | nM | CHEMBL1410147 |
| 6.15 | IC50 | 710 | nM | CHEMBL1333250 |
| 6.15 | IC50 | 707 | nM | CHEMBL1333250 |
| 6.15 | IC50 | 709 | nM | CHEMBL1714665 |
| 6.08 | IC50 | 828.8 | nM | CHEMBL1993627 |
| 6.01 | IC50 | 985 | nM | CHEMBL1725120 |
| 6.00 | IC50 | 1000 | nM | CHEMBL1706034 |
| 6.00 | IC50 | 1000 | nM | CHEMBL1725120 |
| 6.00 | IC50 | 1000 | nM | CHEMBL1314602 |
| 5.99 | IC50 | 1030 | nM | CHEMBL1314602 |
| 5.97 | IC50 | 1070 | nM | CHEMBL1732102 |
| 5.96 | IC50 | 1100 | nM | CHEMBL1725120 |
| 5.91 | IC50 | 1227 | nM | CHEMBL1390840 |
| 5.90 | IC50 | 1250 | nM | CHEMBL1406130 |
| 5.89 | IC50 | 1300 | nM | CHEMBL1703200 |
| 5.89 | IC50 | 1273 | nM | CHEMBL1392651 |
| 5.89 | IC50 | 1300 | nM | CHEMBL1406130 |
| 5.85 | IC50 | 1423 | nM | CHEMBL1335945 |
| 5.84 | IC50 | 1450 | nM | CHEMBL1732623 |
| 5.83 | IC50 | 1490 | nM | CHEMBL1520143 |
| 5.82 | IC50 | 1499 | nM | CHEMBL1410147 |
| 5.80 | IC50 | 1590 | nM | CHEMBL1725977 |
| 5.78 | IC50 | 1670 | nM | CHEMBL1449845 |
| 5.75 | IC50 | 1770 | nM | CHEMBL1701846 |
| 5.75 | IC50 | 1800 | nM | CHEMBL1701846 |
| 5.73 | IC50 | 1880 | nM | CHEMBL1601716 |
| 5.72 | IC50 | 1900 | nM | CHEMBL98386 |
| 5.72 | IC50 | 1900 | nM | CHEMBL1714438 |
| 5.72 | IC50 | 1900 | nM | CHEMBL1601716 |
| 5.71 | IC50 | 1940 | nM | CHEMBL1352830 |
| 5.68 | IC50 | 2101 | nM | CHEMBL1392651 |
| 5.67 | IC50 | 2140 | nM | CHEMBL1717022 |
| 5.65 | IC50 | 2250 | nM | CHEMBL1411202 |
| 5.64 | IC50 | 2300 | nM | CHEMBL1411202 |
| 5.64 | IC50 | 2300 | nM | CHEMBL1717825 |
| 5.61 | IC50 | 2450 | nM | CHEMBL98386 |
| 5.58 | IC50 | 2600 | nM | CHEMBL1371792 |
| 5.58 | IC50 | 2650 | nM | CHEMBL1391552 |
| 5.57 | IC50 | 2708 | nM | CHEMBL3199050 |
| 5.57 | IC50 | 2680 | nM | CHEMBL1553163 |
| 5.55 | IC50 | 2800 | nM | CHEMBL1339149 |
| 5.55 | IC50 | 2790 | nM | CHEMBL1339149 |
| 5.54 | IC50 | 2905 | nM | CHEMBL1310318 |
| 5.54 | IC50 | 2910 | nM | CHEMBL1321637 |
| 5.54 | IC50 | 2900 | nM | CHEMBL1310318 |
| 5.52 | IC50 | 3030 | nM | CHEMBL1726776 |
| 5.51 | IC50 | 3100 | nM | CHEMBL1423690 |
| 5.51 | IC50 | 3100 | nM | CHEMBL1717825 |
| 5.51 | IC50 | 3120 | nM | CHEMBL1718013 |
PubChem BioAssay actives
49 with measured affinity, of 69 total; 39 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[[3-(3-oxo-1,2-benzothiazol-2-yl)phenyl]sulfonylamino]benzoic acid | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 0.7100 | uM |
| 2-(2,5-dimethylphenyl)-6-fluoro-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.0000 | uM |
| 6-fluoro-2-(4-methoxyphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 1.0000 | uM |
| 5-fluoro-2-(4-methoxyphenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.0000 | uM |
| 6-fluoro-2-phenyl-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 1.3000 | uM |
| 5-fluoro-2-phenyl-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.3000 | uM |
| 2-(4-chlorophenyl)-5-fluoro-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.8000 | uM |
| 2-(4-chlorophenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.9000 | uM |
| 2-(2,5-dimethylphenyl)-5-fluoro-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.9000 | uM |
| 2-[4-(dimethylamino)phenyl]-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 1.9000 | uM |
| N-benzyl-3-(3-oxo-1,2-benzothiazol-2-yl)benzamide | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 2.3000 | uM |
| 2-(2-morpholin-4-yl-5-morpholin-4-ylsulfonylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 2.6000 | uM |
| N,N-dimethyl-3-(3-oxo-1,2-benzothiazol-2-yl)benzenesulfonamide | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 2.8000 | uM |
| 6-fluoro-2-(2-methylphenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 2.9000 | uM |
| 2-(4-methyl-3-piperidin-1-ylsulfonylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 3.1000 | uM |
| 3-(3-oxo-1,2-benzothiazol-2-yl)benzoic acid | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 3.3000 | uM |
| 2-[3-(trifluoromethyl)phenyl]-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 3.4000 | uM |
| 2-(4-fluorophenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 3.4000 | uM |
| 6-fluoro-2-(4-fluorophenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 3.6000 | uM |
| 5-fluoro-2-(4-fluorophenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 3.6000 | uM |
| 2-(3-methoxyphenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 3.7000 | uM |
| 2-(4-methylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 3.9000 | uM |
| 2-[4-(2,4-dichlorophenoxy)butanoylamino]-1,3-dihydroindene-2-carboxamide | 225397: Compound was evaluated for the inhibition constant against phosphomannose isomerase enzyme of Candida albicans (CaPMI) | ki | 4.0000 | uM |
| 2-[4-(3,4-dichlorophenyl)sulfanylbutanoylamino]-N-hydroxy-1,3-dihydroindene-2-carboxamide | 225397: Compound was evaluated for the inhibition constant against phosphomannose isomerase enzyme of Candida albicans (CaPMI) | ki | 4.0000 | uM |
| 2-(3-iodophenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 4.3000 | uM |
| 5-fluoro-2-(2-fluorophenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 4.3000 | uM |
| 2-(3-chlorophenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 4.8000 | uM |
| methyl 3-(3-oxo-1,2-benzothiazol-2-yl)benzoate | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 4.9000 | uM |
| 2-(4-tert-butylphenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 5.0000 | uM |
| 2-(3-methylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 6.0000 | uM |
| 2-phenyl-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 6.4000 | uM |
| 2-(2,5-dimethylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 6.6000 | uM |
| ethyl 4-(3-oxo-1,2-benzothiazol-2-yl)benzoate | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 7.2000 | uM |
| 2-(5-morpholin-4-ylsulfonyl-2-pyrrolidin-1-ylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 7.5000 | uM |
| 5-fluoro-2-(3-fluorophenyl)-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 8.3000 | uM |
| 2-[3-(dimethylamino)phenyl]-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 8.5000 | uM |
| 2-(4-chloro-3-morpholin-4-ylsulfonylphenyl)-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 8.6000 | uM |
| 2-naphthalen-2-yl-1,2-benzothiazol-3-one | 597374: Inhibition of human purified phosphomannose isomerase | ic50 | 9.4000 | uM |
| 2-(2,3-dimethylphenyl)-6-fluoro-1,2-benzothiazol-3-one | 1187642: Inhibition of phosphomannose isomerase (unknown origin) | ic50 | 9.9000 | uM |
CTD chemical–gene interactions
48 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, decreases expression, increases expression, decreases reaction, increases abundance | 3 |
| sodium arsenite | decreases expression, increases abundance | 2 |
| Arsenic | increases methylation, decreases expression, increases abundance | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Cyclosporine | decreases expression, increases expression | 2 |
| p-Chloromercuribenzoic Acid | decreases expression, affects cotreatment | 2 |
| aristolochic acid I | decreases expression | 1 |
| ginger extract | decreases expression, decreases reaction, increases abundance | 1 |
| dicrotophos | increases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| sodium arsenate | decreases expression | 1 |
| beta-lapachone | decreases expression, increases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| cupric chloride | decreases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| bisphenol B | increases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| NSC 689534 | affects binding, decreases expression | 1 |
| Temozolomide | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Amiodarone | increases expression | 1 |
ChEMBL screening assays
14 unique, capped per target: 14 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1613774 | Binding | PUBCHEM_BIOASSAY: Confirmation of compounds inhibiting phosphomannose isomerase (PMI) via a fluorescence intensity assay using a high concentration of mannose 6-phosphate. (Class of assay: confirmatory) [Related pubchem assays (depositor de | PubChem BioAssay data set |
Cellosaurus cell lines
5 cell lines: 3 cancer cell line, 1 transformed cell line, 1 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B9W3 | Abcam HEK293T MPI KO | Transformed cell line | Female |
| CVCL_C9JJ | SDQLCHi059-A | Induced pluripotent stem cell | Female |
| CVCL_E1IV | HyCyte A-549 KO-hMPI | Cancer cell line | Male |
| CVCL_SY81 | HAP1 MPI (-) 1 | Cancer cell line | Male |
| CVCL_SY82 | HAP1 MPI (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
2 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT03404869 | PHASE1/PHASE2 | UNKNOWN | Study of ORL-1M (D-mannose) in Patients With CDG-Ib |
| NCT03655223 | Not specified | ENROLLING_BY_INVITATION | Early Check: Expanded Screening in Newborns |
Related Atlas pages
- Associated diseases: MPI-congenital disorder of glycosylation
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): MPI-congenital disorder of glycosylation