MPST
gene geneOn this page
Also known as MSTTST2TUM1
Summary
MPST (mercaptopyruvate sulfurtransferase, HGNC:7223) is a protein-coding gene on chromosome 22q12.3, encoding 3-mercaptopyruvate sulfurtransferase (P25325). Transfer of a sulfur ion to cyanide or to other thiol compounds.
This protein encoded by this gene catalyzes the transfer of a sulfur ion from 3-mercaptopyruvate to cyanide or other thiol compounds. It may be involved in cysteine degradation and cyanide detoxification. There is confusion in literature between this protein (mercaptopyruvate sulfurtransferase, MPST), which appears to be cytoplasmic, and thiosulfate sulfurtransferase (rhodanese, TST, GeneID:7263), which is a mitochondrial protein. Deficiency in MPST activity has been implicated in a rare inheritable disorder known as mercaptolactate-cysteine disulfiduria (MCDU). Alternatively spliced transcript variants encoding same or different isoforms have been identified for this gene.
Source: NCBI Gene 4357 — RefSeq curated summary.
At a glance
- Gene–disease (curated): encephalopathy due to beta-mercaptolactate-cysteine disulfiduria (No Known Disease Relationship, ClinGen)
- GWAS associations: 1
- Clinical variants (ClinVar): 56 total
- Druggable target: yes
- MANE Select transcript:
NM_021126
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7223 |
| Approved symbol | MPST |
| Name | mercaptopyruvate sulfurtransferase |
| Location | 22q12.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MST, TST2, TUM1 |
| Ensembl gene | ENSG00000128309 |
| Ensembl biotype | protein_coding |
| OMIM | 602496 |
| Entrez | 4357 |
Gene structure
Transcript identifiers
Ensembl transcripts: 15 — 14 protein_coding, 1 retained_intron
ENST00000341116, ENST00000397225, ENST00000401419, ENST00000404393, ENST00000404802, ENST00000429360, ENST00000485587, ENST00000865000, ENST00000865001, ENST00000865002, ENST00000865003, ENST00000865004, ENST00000935191, ENST00000935192, ENST00000935193
RefSeq mRNA: 5 — MANE Select: NM_021126
NM_001013436, NM_001130517, NM_001369904, NM_001369905, NM_021126
CCDS: CCDS13939, CCDS46703
Canonical transcript exons
ENST00000429360 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001958450 | 37029216 | 37029815 |
| ENSE00003763753 | 37024192 | 37024810 |
| ENSE00003765684 | 37019742 | 37019872 |
Expression profiles
Bgee: expression breadth ubiquitous, 280 present calls, max score 98.92.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 20.5938 / max 299.4998, expressed in 1779 samples.
FANTOM5 promoters (14 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 192094 | 11.9340 | 1749 |
| 192095 | 4.6791 | 1451 |
| 192099 | 1.8915 | 958 |
| 192093 | 0.9846 | 699 |
| 192100 | 0.2111 | 85 |
| 192097 | 0.1949 | 23 |
| 192102 | 0.1794 | 61 |
| 192101 | 0.1512 | 49 |
| 192092 | 0.1159 | 31 |
| 192103 | 0.1079 | 20 |
Top tissues by expression
293 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 98.92 | gold quality |
| right lobe of liver | UBERON:0001114 | 98.71 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 97.52 | gold quality |
| liver | UBERON:0002107 | 97.03 | gold quality |
| transverse colon | UBERON:0001157 | 96.58 | gold quality |
| body of pancreas | UBERON:0001150 | 96.34 | gold quality |
| ileal mucosa | UBERON:0000331 | 95.81 | gold quality |
| left ovary | UBERON:0002119 | 95.79 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 95.55 | gold quality |
| right ovary | UBERON:0002118 | 95.51 | gold quality |
| duodenum | UBERON:0002114 | 95.40 | gold quality |
| body of stomach | UBERON:0001161 | 95.35 | gold quality |
| mucosa of stomach | UBERON:0001199 | 95.30 | gold quality |
| esophagus mucosa | UBERON:0002469 | 95.04 | gold quality |
| skin of abdomen | UBERON:0001416 | 94.99 | gold quality |
| small intestine | UBERON:0002108 | 94.92 | gold quality |
| gastrocnemius | UBERON:0001388 | 94.89 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 94.89 | gold quality |
| skin of leg | UBERON:0001511 | 94.66 | gold quality |
| right lung | UBERON:0002167 | 94.36 | gold quality |
| right adrenal gland | UBERON:0001233 | 94.32 | gold quality |
| esophagus | UBERON:0001043 | 94.14 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 94.11 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 94.09 | gold quality |
| muscle of leg | UBERON:0001383 | 93.81 | gold quality |
| colon | UBERON:0001155 | 93.75 | gold quality |
| right atrium auricular region | UBERON:0006631 | 93.74 | gold quality |
| lower esophagus | UBERON:0013473 | 93.60 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 93.60 | gold quality |
| large intestine | UBERON:0000059 | 93.57 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-7008 | yes | 1366.32 |
| E-HCAD-4 | yes | 144.94 |
| E-HCAD-6 | yes | 57.04 |
| E-MTAB-8410 | yes | 15.03 |
| E-ENAD-27 | no | 4.32 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F1
Literature-anchored findings (GeneRIF, showing 14)
- This work is the first report of a functional genetic polymorphism affecting MPST and should help in investigation of disorders such as mercaptolactate-cysteine disulfiduria. (PMID:16545926)
- Data suggest that impaired rhodanese expression is associated with increased whole cell reactive oxygen species as well as higher mitochondrial superoxide production and predicts mortality in hemodialysis patients. (PMID:19695240)
- In all the investigated cell lines, the activity of MPST was higher than that of CST, which suggests that in these cells, the main pathway of sulfane sulfur formation is the MPST-catalyzed reaction. (PMID:20446008)
- The crystal structure analysis allows us to propose a detailed mechanism for MST in which an Asp-His-Ser catalytic triad is positioned to activate the nucleophilic cysteine residue and participate in general acid-base chemistry (PMID:23698001)
- distinct roles of each TUM1 isoform in the sulfur transfer processes in the cell (PMID:25336638)
- In this review, we discuss the roles of non-canonical Hippo/Mst signaling pathways in lymphocyte development and functions. [review] (PMID:25487919)
- 3-Mercaptopyruvate sulphurtransferase and not cystathionine gamma-lyase is the primary regulator of coronary artery hydrogen sulfide production and function. (PMID:26519030)
- 3-Mercaptopyruvate sulfurtransferase supports endothelial cell angiogenesis and bioenergetics. (PMID:30644090)
- MPST inactivation or silencing enhances the plasticity of dermal fibroblasts in a TET1 and glycolysis dependent manner and promotes adipogenic transdifferentiation. (PMID:31634482)
- Thioredoxin regulates human mercaptopyruvate sulfurtransferase at physiologically-relevant concentrations. (PMID:32179647)
- 3-Mercaptopyruvate sulfurtransferase represses tumour progression and predicts prognosis in hepatocellular carcinoma. (PMID:35243746)
- MPST deficiency promotes intestinal epithelial cell apoptosis and aggravates inflammatory bowel disease via AKT. (PMID:36126419)
- 3-Mercaptopyruvate sulfur transferase is a protein persulfidase. (PMID:36732619)
- Role of the 3-mercaptopyruvate sulfurtransferase in colon/colorectal cancers. (PMID:38631098)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Mpst | ENSMUSG00000071711 |
| rattus_norvegicus | Mpst | ENSRNOG00000000185 |
| caenorhabditis_elegans | WBGENE00008409 | |
| caenorhabditis_elegans | WBGENE00010380 | |
| caenorhabditis_elegans | WBGENE00010383 | |
| caenorhabditis_elegans | WBGENE00011307 | |
| caenorhabditis_elegans | WBGENE00017387 | |
| caenorhabditis_elegans | WBGENE00022006 | |
| caenorhabditis_elegans | WBGENE00022007 |
Paralogs (1): TST (ENSG00000128311)
Protein
Protein identifiers
3-mercaptopyruvate sulfurtransferase — P25325 (reviewed: P25325)
All UniProt accessions (3): P25325, A0A140VJX3, B1AH49
UniProt curated annotations — full annotation on UniProt →
Function. Transfer of a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Detoxifies cyanide and is required for thiosulfate biosynthesis. Acts as an antioxidant. In combination with cysteine aminotransferase (CAT), contributes to the catabolism of cysteine and is an important producer of hydrogen sulfide in the brain, retina and vascular endothelial cells. Hydrogen sulfide H(2)S is an important synaptic modulator, signaling molecule, smooth muscle contractor and neuroprotectant. Its production by the 3MST/CAT pathway is regulated by calcium ions.
Subunit / interactions. Monomer (active form). Homodimer; disulfide-linked (inactive form).
Subcellular location. Cytoplasm. Mitochondrion. Synapse. Synaptosome.
Disease relevance. Aberrant MPST activity is found in a few cases of mercaptolactate-cysteine disulfiduria (MCDU) characterized by the appearance of large quantaties of the sulfur-containing amino acid, beta-mercaptolactate-cysteine disulfide, in the urine. Some cases have associated intellectual disability.
Activity regulation. By oxidative stress, and thioredoxin. Under oxidative stress conditions, the catalytic cysteine site is converted to a sulfenate which inhibits the MPST enzyme activity. Reduced thioredoxin cleaves an intersubunit disulfide bond to turn on the redox switch and reactivate the enzyme.
Domain organisation. Contains two rhodanese domains with different primary structures but with near identical secondary structure conformations suggesting a common evolutionary origin. Only the C-terminal rhodanese domain contains the catalytic cysteine residue.
Miscellaneous. Thioredoxin (Trx) or dihydrolipoic acid (DHLA) are required to release hydrogen sulfide from the persulfide intermediate.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P25325-1 | 1 | yes |
| P25325-2 | 2 |
RefSeq proteins (5): NP_001013454, NP_001123989, NP_001356833, NP_001356834, NP_066949* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001307 | Thiosulphate_STrfase_CS | Conserved_site |
| IPR001763 | Rhodanese-like_dom | Domain |
| IPR036873 | Rhodanese-like_dom_sf | Homologous_superfamily |
| IPR045078 | TST/MPST-like | Family |
Pfam: PF00581
Enzyme classification (BRENDA):
- EC 2.8.1.2 — 3-mercaptopyruvate sulfurtransferase (BRENDA: 12 organisms, 45 substrates, 35 inhibitors, 78 Km, 47 kcat entries)
Substrate kinetics (BRENDA)
13 substrates with measured Km, best-characterized 13. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| 3-MERCAPTOPYRUVATE | 0.015–73 | 48 |
| CYANIDE | 1.66–6 | 4 |
| L-CYSTEINE | 3.8–6 | 4 |
| THIOREDOXIN | 0.0025–0.0031 | 4 |
| DITHIOTHREITOL | 2.59–4.6 | 3 |
| N-ACETYL-L-CYSTEINE | 11.4–17 | 3 |
| 2-MERCAPTOETHANOL | 19–108 | 2 |
| THIOSULFATE | 1.7–266 | 2 |
| CYSTEINE | 8.2 | 1 |
| DIHYDROLIPOIC ACID | 4.4 | 1 |
| GLUTATHIONE | 28 | 1 |
| L-HOMOCYSTEINE | 12.5 | 1 |
| REDUCED THIOREDOXIN | 0.3 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- 2-oxo-3-sulfanylpropanoate + [thioredoxin]-dithiol = [thioredoxin]-disulfide + hydrogen sulfide + pyruvate + H(+) (RHEA:21740)
UniProt features (43 total): helix 13, modified residue 9, strand 9, sequence conflict 2, domain 2, initiator methionine 1, chain 1, disulfide bond 1, splice variant 1, turn 1, region of interest 1, active site 1, binding site 1
Structure
Experimental structures (PDB)
2 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4JGT | X-RAY DIFFRACTION | 2.16 |
| 3OLH | X-RAY DIFFRACTION | 2.5 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P25325-F1 | 95.74 | 0.93 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 248 (cysteine persulfide intermediate)
Ligand- & substrate-binding residues (1): 188
Post-translational modifications (9): 40, 40, 146, 164, 15, 23, 2, 3, 35
Disulfide bonds (1): 264
Function
Pathways and Gene Ontology
Reactome pathways
4 pathways
| ID | Pathway |
|---|---|
| R-HSA-1614558 | Degradation of cysteine and homocysteine |
| R-HSA-1430728 | Metabolism |
| R-HSA-1614635 | Sulfur amino acid metabolism |
| R-HSA-71291 | Metabolism of amino acids and derivatives |
MSigDB gene sets: 150 (showing top):
GOBP_SPINAL_CORD_DEVELOPMENT, GOBP_HEPATICOBILIARY_SYSTEM_DEVELOPMENT, KAAB_FAILED_HEART_ATRIUM_DN, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, KEGG_CYSTEINE_AND_METHIONINE_METABOLISM, GOBP_TRNA_METABOLIC_PROCESS, GOBP_HOMOCYSTEINE_METABOLIC_PROCESS, GOBP_RNA_MODIFICATION, GOBP_SULFUR_COMPOUND_BIOSYNTHETIC_PROCESS, WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_UP, GOBP_SULFUR_COMPOUND_CATABOLIC_PROCESS, BLALOCK_ALZHEIMERS_DISEASE_UP, GOBP_ORGANIC_ACID_CATABOLIC_PROCESS, SCHAEFFER_PROSTATE_DEVELOPMENT_12HR_UP, GOBP_ORGANIC_ACID_METABOLIC_PROCESS
GO Biological Process (8): sulfur amino acid catabolic process (GO:0000098), kidney development (GO:0001822), liver development (GO:0001889), cyanate catabolic process (GO:0009440), response to toxic substance (GO:0009636), transsulfuration (GO:0019346), spinal cord development (GO:0021510), hydrogen sulfide biosynthetic process (GO:0070814)
GO Molecular Function (6): thiosulfate-cyanide sulfurtransferase activity (GO:0004792), sulfurtransferase activity (GO:0016783), 3-mercaptopyruvate sulfurtransferase activity (GO:0016784), identical protein binding (GO:0042802), protein binding (GO:0005515), transferase activity (GO:0016740)
GO Cellular Component (6): mitochondrion (GO:0005739), mitochondrial matrix (GO:0005759), neuron projection (GO:0043005), synapse (GO:0045202), extracellular exosome (GO:0070062), cytoplasm (GO:0005737)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Sulfur amino acid metabolism | 1 |
| Metabolism of amino acids and derivatives | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| sulfurtransferase activity | 2 |
| sulfur amino acid metabolic process | 1 |
| sulfur compound catabolic process | 1 |
| carboxylic acid catabolic process | 1 |
| animal organ development | 1 |
| renal system development | 1 |
| gland development | 1 |
| hepaticobiliary system development | 1 |
| catabolic process | 1 |
| response to chemical | 1 |
| homocysteine metabolic process | 1 |
| L-amino acid metabolic process | 1 |
| proteinogenic amino acid metabolic process | 1 |
| central nervous system development | 1 |
| anatomical structure development | 1 |
| sulfur compound biosynthetic process | 1 |
| hydrogen sulfide metabolic process | 1 |
| transferase activity, transferring sulphur-containing groups | 1 |
| protein binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| mitochondrion | 1 |
| intracellular organelle lumen | 1 |
| plasma membrane bounded cell projection | 1 |
| cell junction | 1 |
| extracellular vesicle | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
1063 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MPST | CTH | P32929 | 940 |
| MPST | P0DN79 | P0DN79 | 914 |
| MPST | H7C2H4 | H7C2H4 | 914 |
| MPST | RET | P07949 | 906 |
| MPST | MOCS3 | O95396 | 880 |
| MPST | CTU1 | Q7Z7A3 | 821 |
| MPST | NFS1 | Q9Y697 | 816 |
| MPST | URM1 | Q9BTM9 | 816 |
| MPST | SUOX | P51687 | 764 |
| MPST | SQOR | Q9Y6N5 | 758 |
| MPST | ETHE1 | O95571 | 750 |
| MPST | DAO | P14920 | 730 |
| MPST | CARS2 | Q9HA77 | 616 |
| MPST | CARS1 | P49589 | 593 |
| MPST | CDO1 | P78513 | 548 |
IntAct
19 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MPST | AKT1 | psi-mi:“MI:0915”(physical association) | 0.570 |
| MPST | AKT1 | psi-mi:“MI:0403”(colocalization) | 0.570 |
| MPST | AKT1 | psi-mi:“MI:0407”(direct interaction) | 0.570 |
| ZBED1 | MPST | psi-mi:“MI:0915”(physical association) | 0.560 |
| PCNA | MPST | psi-mi:“MI:0915”(physical association) | 0.370 |
| MPST | TFAP2A | psi-mi:“MI:0915”(physical association) | 0.370 |
| HSCB | RBP5 | psi-mi:“MI:0914”(association) | 0.350 |
| MAPT | MEX3A | psi-mi:“MI:0914”(association) | 0.350 |
| CHM | POLR3A | psi-mi:“MI:0914”(association) | 0.350 |
| DISC1 | AGRN | psi-mi:“MI:0914”(association) | 0.350 |
| DDX28 | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| VENTX | UBA6 | psi-mi:“MI:0914”(association) | 0.350 |
| CFTR | UBA6 | psi-mi:“MI:2364”(proximity) | 0.270 |
| LARP7 | SBNO1 | psi-mi:“MI:2364”(proximity) | 0.270 |
| DDX6 | RPSA2 | psi-mi:“MI:2364”(proximity) | 0.270 |
| MPST | ZBED1 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (69): MPST (Co-fractionation), MPST (Affinity Capture-MS), SPR (Co-fractionation), GLRX5 (Co-fractionation), PARK7 (Co-fractionation), NENF (Co-fractionation), C21orf33 (Co-fractionation), HINT2 (Co-fractionation), ACO2 (Co-fractionation), LACTB2 (Co-fractionation), GRHPR (Co-fractionation), FXN (Co-fractionation), CLIC4 (Co-fractionation), PMPCA (Co-fractionation), MPST (Co-fractionation)
ESM2 similar proteins: A4FV98, A4IFH5, A5PK51, A6NDG6, D3YWP0, D3ZDK7, P10950, P24298, P25325, P50336, P60487, Q0VD18, Q12788, Q1JPJ0, Q2KJJ5, Q2T9S4, Q32NY4, Q3UGR5, Q3ZBF9, Q501J2, Q5BJJ5, Q5F4B1, Q5I0D5, Q5R4B4, Q5U2W5, Q5ZIW1, Q60HD5, Q6AYR6, Q6SKR2, Q6XQN6, Q86VU5, Q8BIG7, Q8C4J7, Q8CG76, Q8CHP8, Q8IZ69, Q8NE01, Q8R2H9, Q8TCD5, Q8TCT1
Diamond homologs: O26719, P25325, P27477, Q9HUK9, O64530, P00586, P24329, P25324, P31142, P46635, P52196, P58388, P97532, Q08686, Q16762, Q24JL3, Q99J99, Q9I452, Q9USJ1, D4GYM0, P71121, P91247, Q72JV2, P59989, P9WHF8, P9WHF9, A0R4C9, P16385, P46700, P9WHF4, P9WHF5, Q7TX80, O17730, P52197, P78067, P9WHF6, P9WHF7, Q50036, Q7TWT6, Q9RXT9
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
56 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 50 |
| Likely benign | 2 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
739 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 22:37029200:T:TA | acceptor_gain | 0.9900 |
| 22:37029211:T:A | acceptor_gain | 0.9900 |
| 22:37019770:TGCAG:T | donor_loss | 0.9800 |
| 22:37019771:GCAGG:G | donor_loss | 0.9800 |
| 22:37019772:CAGGT:C | donor_loss | 0.9800 |
| 22:37019773:AGGTT:A | donor_loss | 0.9800 |
| 22:37019774:GGTT:G | donor_loss | 0.9800 |
| 22:37019775:G:A | donor_loss | 0.9800 |
| 22:37022460:TG:T | donor_gain | 0.9800 |
| 22:37024170:T:TA | acceptor_gain | 0.9800 |
| 22:37029213:TAGGC:T | acceptor_loss | 0.9800 |
| 22:37029214:A:AG | acceptor_gain | 0.9800 |
| 22:37029214:A:AT | acceptor_loss | 0.9800 |
| 22:37029215:G:A | acceptor_loss | 0.9800 |
| 22:37029215:G:GG | acceptor_gain | 0.9800 |
| 22:37029215:GGC:G | acceptor_gain | 0.9800 |
| 22:37024776:C:T | donor_gain | 0.9700 |
| 22:37024807:GACG:G | donor_gain | 0.9700 |
| 22:37029208:T:TA | acceptor_gain | 0.9700 |
| 22:37029214:AG:A | acceptor_gain | 0.9700 |
| 22:37029215:GG:G | acceptor_gain | 0.9700 |
| 22:37029215:GGCA:G | acceptor_gain | 0.9700 |
| 22:37022461:GA:G | donor_gain | 0.9600 |
| 22:37022462:AA:A | donor_gain | 0.9600 |
| 22:37022464:G:GG | donor_gain | 0.9600 |
| 22:37019915:G:GT | donor_gain | 0.9500 |
| 22:37024188:CCAGG:C | acceptor_gain | 0.9500 |
| 22:37024189:CAGGC:C | acceptor_gain | 0.9500 |
| 22:37029215:GGCAT:G | acceptor_gain | 0.9500 |
| 22:37019850:G:GT | donor_gain | 0.9400 |
AlphaMissense
2048 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 22:37024780:T:C | F189L | 0.995 |
| 22:37024782:C:A | F189L | 0.995 |
| 22:37024782:C:G | F189L | 0.995 |
| 22:37029448:G:C | W276C | 0.994 |
| 22:37029448:G:T | W276C | 0.994 |
| 22:37029384:G:A | C255Y | 0.993 |
| 22:37029385:C:G | C255W | 0.993 |
| 22:37024360:T:C | F49L | 0.992 |
| 22:37024362:C:A | F49L | 0.992 |
| 22:37024362:C:G | F49L | 0.992 |
| 22:37024759:G:C | D182H | 0.992 |
| 22:37029446:T:A | W276R | 0.992 |
| 22:37029446:T:C | W276R | 0.992 |
| 22:37024505:T:A | V97D | 0.991 |
| 22:37029455:T:A | W279R | 0.990 |
| 22:37029455:T:C | W279R | 0.990 |
| 22:37024760:A:T | D182V | 0.989 |
| 22:37024760:A:C | D182A | 0.988 |
| 22:37024516:G:C | D101H | 0.987 |
| 22:37024517:A:T | D101V | 0.987 |
| 22:37024765:C:G | R184G | 0.987 |
| 22:37029257:T:C | F213L | 0.987 |
| 22:37029259:C:A | F213L | 0.987 |
| 22:37029259:C:G | F213L | 0.987 |
| 22:37024549:C:A | R112S | 0.986 |
| 22:37029383:T:C | C255R | 0.986 |
| 22:37024544:C:A | A110D | 0.985 |
| 22:37024558:T:A | W115R | 0.985 |
| 22:37024558:T:C | W115R | 0.985 |
| 22:37024760:A:G | D182G | 0.985 |
dbSNP variants (sampled 300 via entrez): RS1000403867 (22:37019800 T>C), RS1000490589 (22:37021533 C>T), RS1000606089 (22:37021181 T>C,G), RS1000750792 (22:37027077 C>A,T), RS1001105855 (22:37027018 T>C), RS1001338224 (22:37021524 G>A), RS1001592428 (22:37026729 G>A), RS1001675143 (22:37018682 C>G,T), RS1001774198 (22:37024515 C>A,T), RS1001923641 (22:37030210 T>C), RS1002196716 (22:37028009 A>T), RS1002617451 (22:37027265 G>A), RS1003166856 (22:37023024 G>C), RS1003443979 (22:37023371 T>C), RS1003463346 (22:37019913 A>G)
Disease associations
OMIM: gene MIM:602496 | disease phenotypes: MIM:249650
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| encephalopathy due to beta-mercaptolactate-cysteine disulfiduria | No Known Disease Relationship | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| encephalopathy due to beta-mercaptolactate-cysteine disulfiduria | No Known Disease Relationship | AR |
Mondo (1): encephalopathy due to beta-mercaptolactate-cysteine disulfiduria (MONDO:0009585)
Orphanet (1): Beta-mercaptolactate cysteine disulfiduria (Orphanet:1035)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007457_8 | Eye color (saturation) | 5.000000e-08 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009764 | eye colour measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C563085 | Mercaptolactate-Cysteine Disulfiduria (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066937 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Hydrogen sulphide synthesis
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| I3MT-3 | Inhibition | 5.57 | pIC50 |
CTD chemical–gene interactions
56 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Aflatoxin B1 | affects expression, decreases expression, increases methylation | 4 |
| bisphenol A | affects expression, decreases expression, increases expression | 3 |
| sodium arsenite | decreases expression, increases expression | 2 |
| methacrylaldehyde | affects cotreatment, decreases expression, increases abundance | 2 |
| Acrolein | decreases expression, increases abundance, affects cotreatment | 2 |
| Air Pollutants | affects cotreatment, decreases expression, increases abundance, increases expression | 2 |
| Benzo(a)pyrene | decreases expression | 2 |
| Ozone | affects cotreatment, decreases expression, increases abundance | 2 |
| Smoke | decreases expression, increases abundance, increases expression | 2 |
| 1-Methyl-4-phenylpyridinium | decreases expression, increases expression | 2 |
| FR900359 | increases phosphorylation | 1 |
| bismuth tripotassium dicitrate | decreases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | affects cotreatment, decreases expression, increases abundance | 1 |
| sodium arsenate | decreases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression, increases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| nutlin 3 | affects cotreatment, increases secretion | 1 |
| bisphenol B | increases expression | 1 |
| abrine | decreases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5651808 | Binding | Binding affinity to human MPST incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
1 cell lines: 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3B7 | Abcam HEK293T MPST KO | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: encephalopathy due to beta-mercaptolactate-cysteine disulfiduria
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): encephalopathy due to beta-mercaptolactate-cysteine disulfiduria