MSANTD2-AS1

Summary

MSANTD2-AS1 (MSANTD2 antisense RNA 1, HGNC:55601) is a long non-coding RNA gene on chromosome 11q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55601
Approved symbol	MSANTD2-AS1
Name	MSANTD2 antisense RNA 1
Location	11q24.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	BCLET
Ensembl gene	ENSG00000245498
Ensembl biotype	lncRNA
Entrez	100507283
RNAcentral	URS0000759BD3 — lncRNA, 2908 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000499143, ENST00000529392, ENST00000653170, ENST00000653593, ENST00000655101, ENST00000656769, ENST00000657666, ENST00000657884, ENST00000658998, ENST00000661455, ENST00000662980, ENST00000664095, ENST00000665706, ENST00000666874, ENST00000666933, ENST00000667918, ENST00000835178

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000499143 — 5 exons

Exon	Start	End
ENSE00001962305	124801984	124802157
ENSE00001965755	124800450	124801256
ENSE00001965967	124805320	124805504
ENSE00001966202	124804731	124804848
ENSE00001988280	124832886	124834487

Expression profiles

Bgee: expression breadth ubiquitous, 223 present calls, max score 91.62.

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	91.62	gold quality
sperm	CL:0000019	82.41	gold quality
tendon of biceps brachii	UBERON:0008188	81.94	silver quality
medial globus pallidus	UBERON:0002477	79.18	silver quality
tendon	UBERON:0000043	78.24	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.84	gold quality
ventricular zone	UBERON:0003053	76.83	gold quality
pigmented layer of retina	UBERON:0001782	76.73	gold quality
right uterine tube	UBERON:0001302	76.10	gold quality
pituitary gland	UBERON:0000007	75.79	gold quality
globus pallidus	UBERON:0001875	75.62	silver quality
calcaneal tendon	UBERON:0003701	75.43	gold quality
right lobe of thyroid gland	UBERON:0001119	75.05	gold quality
thyroid gland	UBERON:0002046	75.02	gold quality
ganglionic eminence	UBERON:0004023	74.84	gold quality
adenohypophysis	UBERON:0002196	74.71	gold quality
left lobe of thyroid gland	UBERON:0001120	74.61	gold quality
bronchial epithelial cell	CL:0002328	74.34	gold quality
bronchus	UBERON:0002185	73.59	gold quality
oviduct epithelium	UBERON:0004804	73.01	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	72.98	gold quality
left ovary	UBERON:0002119	72.79	gold quality
right ovary	UBERON:0002118	72.68	gold quality
hindlimb stylopod muscle	UBERON:0004252	72.35	gold quality
muscle of leg	UBERON:0001383	72.19	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.14	gold quality
islet of Langerhans	UBERON:0000006	72.11	gold quality
popliteal artery	UBERON:0002250	72.10	gold quality
tibial artery	UBERON:0007610	72.07	gold quality
spinal cord	UBERON:0002240	71.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.52

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.