MTARC2
gene geneOn this page
Also known as FLJ20605
Summary
MTARC2 (mitochondrial amidoxime reducing component 2, HGNC:26064) is a protein-coding gene on chromosome 1q41, encoding Mitochondrial amidoxime reducing component 2 (Q969Z3). Catalyzes the reduction of N-oxygenated molecules, acting as a counterpart of cytochrome P450 and flavin-containing monooxygenases in metabolic cycles.
The protein encoded by this gene is an enzyme found in the outer mitochondrial membrane that reduces N-hydroxylated substrates. The encoded protein uses molybdenum as a cofactor and cytochrome b5 type B and NADH cytochrome b5 reductase as accessory proteins. One type of substrate used is N-hydroxylated nucleotide base analogues, which can be toxic to a cell. Other substrates include N(omega)-hydroxy-L-arginine (NOHA) and amidoxime prodrugs, which are activated by the encoded enzyme. Multiple transcript variants encoding the different isoforms have been found for this gene.
Source: NCBI Gene 54996 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 52 total
- Druggable target: yes
- MANE Select transcript:
NM_017898
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:26064 |
| Approved symbol | MTARC2 |
| Name | mitochondrial amidoxime reducing component 2 |
| Location | 1q41 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ20605 |
| Ensembl gene | ENSG00000117791 |
| Ensembl biotype | protein_coding |
| OMIM | 614127 |
| Entrez | 54996 |
Gene structure
Transcript identifiers
Ensembl transcripts: 11 — 8 protein_coding, 2 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000359316, ENST00000366913, ENST00000425560, ENST00000469583, ENST00000472447, ENST00000496078, ENST00000866789, ENST00000866790, ENST00000866791, ENST00000956460, ENST00000956461
RefSeq mRNA: 3 — MANE Select: NM_017898
NM_001317338, NM_001331042, NM_017898
CCDS: CCDS1525, CCDS81425
Canonical transcript exons
ENST00000366913 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000792556 | 220761658 | 220761820 |
| ENSE00000801893 | 220754947 | 220755120 |
| ENSE00001000175 | 220762910 | 220763050 |
| ENSE00001068931 | 220780018 | 220780079 |
| ENSE00001068934 | 220780168 | 220780239 |
| ENSE00001442977 | 220748322 | 220748803 |
| ENSE00001868967 | 220783919 | 220784815 |
| ENSE00003667771 | 220781778 | 220781932 |
Expression profiles
Bgee: expression breadth ubiquitous, 272 present calls, max score 98.92.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.3595 / max 302.6508, expressed in 1342 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 8655 | 4.3610 | 1180 |
| 8653 | 1.4440 | 752 |
| 8654 | 0.5545 | 278 |
Top tissues by expression
285 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 98.92 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 97.31 | gold quality |
| liver | UBERON:0002107 | 97.19 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 97.04 | gold quality |
| thyroid gland | UBERON:0002046 | 96.74 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 96.72 | gold quality |
| right lung | UBERON:0002167 | 96.61 | gold quality |
| nephron tubule | UBERON:0001231 | 96.31 | gold quality |
| kidney epithelium | UBERON:0004819 | 95.66 | gold quality |
| metanephros cortex | UBERON:0010533 | 95.57 | gold quality |
| parotid gland | UBERON:0001831 | 95.47 | gold quality |
| duodenum | UBERON:0002114 | 95.47 | gold quality |
| body of pancreas | UBERON:0001150 | 95.44 | gold quality |
| jejunal mucosa | UBERON:0000399 | 95.24 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 95.12 | gold quality |
| upper lobe of lung | UBERON:0008948 | 94.96 | gold quality |
| kidney | UBERON:0002113 | 94.94 | gold quality |
| right coronary artery | UBERON:0001625 | 94.88 | gold quality |
| gall bladder | UBERON:0002110 | 94.82 | gold quality |
| mucosa of stomach | UBERON:0001199 | 94.76 | gold quality |
| left ovary | UBERON:0002119 | 94.75 | gold quality |
| right ovary | UBERON:0002118 | 94.63 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 94.51 | gold quality |
| left coronary artery | UBERON:0001626 | 94.45 | gold quality |
| body of stomach | UBERON:0001161 | 94.40 | gold quality |
| right atrium auricular region | UBERON:0006631 | 94.34 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 94.23 | gold quality |
| small intestine | UBERON:0002108 | 94.10 | gold quality |
| cortex of kidney | UBERON:0001225 | 94.06 | gold quality |
| renal glomerulus | UBERON:0000074 | 94.02 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.44 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
76 targeting MTARC2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-574-5P | 100.00 | 66.01 | 989 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-8075 | 99.97 | 67.20 | 962 |
| HSA-MIR-507 | 99.97 | 70.11 | 1915 |
| HSA-MIR-557 | 99.96 | 70.01 | 1640 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-9983-3P | 99.94 | 71.48 | 3631 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-205-3P | 99.92 | 69.92 | 3165 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-129-5P | 99.88 | 70.26 | 3273 |
| HSA-MIR-3941 | 99.86 | 70.54 | 2735 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-548AZ-5P | 99.83 | 69.94 | 3230 |
| HSA-MIR-548T-5P | 99.83 | 69.91 | 3220 |
| HSA-MIR-944 | 99.82 | 70.85 | 3042 |
| HSA-MIR-6844 | 99.82 | 70.69 | 2423 |
| HSA-MIR-4713-5P | 99.78 | 67.80 | 1794 |
| HSA-MIR-200A-5P | 99.76 | 69.10 | 949 |
Literature-anchored findings (GeneRIF, showing 9)
- Arc1(MOSC-1) and Arc2(MOSC-2) proteins are monomeric in their active forms. (PMID:20861021)
- results provide the first hints that mARC might be involved in mitochondrial N(omega)-hydroxy-L-arginine reduction and could be of physiological significance in affecting endogenous nitric oxide levels. (PMID:21029045)
- Chlamydomonas reinhardtii ARC has a Zn-dependent activity and protein partners similar to human MARC1 and MARC2. (PMID:21803866)
- analysis of the nature of ligands in the Mo(V) state of the active site of mARC-2 (PMID:21916412)
- Data indicate that mitochondrial amidoxime reducing components 1 and 2 together with the electron transport proteins NADH-cytochrome b5 reductase (CYB5R) and cytochrome b5 (CYB5) catalyze the reduction of N-hydroxylated compounds such as amidoximes. (PMID:23703616)
- Functional characteristics of protein variants encoded by nonsynonymous single nucleotide polymorphisms in MARC1 and MARC2 in healthy Caucasians were determined. (PMID:24423752)
- human mARC-1 and mARC-2 are capable of catalyzing reduction of nitrite to NO through reaction with its molybdenum cofactor (PMID:24500710)
- mARC2 has a pivotal role in protecting human cells against apoptotic effects of the base analog N6-hydroxylaminopurine. (PMID:25713076)
- CIRC-MARC2 SILENCING PROTECTS HUMAN CARDIOMYOCYTES FROM HYPOXIA/REOXYGENATION-INDUCED INJURY BY MODULATING MIR-335-5P/TRPM7 AXIS. (PMID:38010085)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Mtarc2 | ENSMUSG00000073481 |
| rattus_norvegicus | Mtarc2 | ENSRNOG00000077900 |
| caenorhabditis_elegans | WBGENE00009049 | |
| caenorhabditis_elegans | WBGENE00018758 |
Paralogs (2): MOCOS (ENSG00000075643), MTARC1 (ENSG00000186205)
Protein
Protein identifiers
Mitochondrial amidoxime reducing component 2 — Q969Z3 (reviewed: Q969Z3)
Alternative names: Molybdenum cofactor sulfurase C-terminal domain-containing protein 2
All UniProt accessions (3): Q969Z3, F6V6Z1, X1WI34
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the reduction of N-oxygenated molecules, acting as a counterpart of cytochrome P450 and flavin-containing monooxygenases in metabolic cycles. As a component of prodrug-converting system, reduces a multitude of N-hydroxylated prodrugs particularly amidoximes, leading to increased drug bioavailability. May be involved in mitochondrial N(omega)-hydroxy-L-arginine (NOHA) reduction, regulating endogenous nitric oxide levels and biosynthesis. Postulated to cleave the N-OH bond of N-hydroxylated substrates in concert with electron transfer from NADH to cytochrome b5 reductase then to cytochrome b5, the ultimate electron donor that primes the active site for substrate reduction.
Subunit / interactions. Component of a complex composed of cytochrome b5, NADH-cytochrome b5 reductase (CYB5R3) and MTARC2.
Subcellular location. Mitochondrion outer membrane. Peroxisome.
Post-translational modifications. Ubiquitinated by PRKN during mitophagy, leading to its degradation and enhancement of mitophagy. Deubiquitinated by USP30.
Cofactor. Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q969Z3-1 | 1 | yes |
| Q969Z3-2 | 2 |
RefSeq proteins (3): NP_001304267, NP_001317971, NP_060368* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR005302 | MoCF_Sase_C | Domain |
| IPR005303 | MOCOS_middle | Domain |
| IPR011037 | Pyrv_Knase-like_insert_dom_sf | Homologous_superfamily |
Pfam: PF03473, PF03476
Enzyme classification (BRENDA):
- EC 1.16.98.B1 — (BRENDA: organisms, substrates, inhibitors, Km, kcat entries)
- EC 1.7.2.1 — nitrite reductase (NO-forming) (BRENDA: 51 organisms, 98 substrates, 32 inhibitors, 100 Km, 86 kcat entries)
Substrate kinetics (BRENDA)
16 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| NITRITE | 0.0001–416 | 41 |
| O2 | 0.027–1 | 14 |
| NO2- | 0.0015–0.8 | 12 |
| FERRICYTOCHROME C551 | 0.0018–0.079 | 6 |
| HYDROXYLAMINE | 0.43–2.5 | 5 |
| NH2OH | 0.434–2.5 | 5 |
| REDUCED PSEUDOAZURIN | 0.067–0.16 | 5 |
| AZURIN | 0.0008–0.049 | 3 |
| FERROCYTOCHROME C-551 | 0.0018–0.0075 | 3 |
| FERRICYTOCHROME C | 0.0305–0.046 | 2 |
| REDUCED METHYL VIOLOGEN | 0.41 | 1 |
| FERRICYTOCHROME C B0428 | — | 0 |
| FERROCYTOCHROME C2 | — | 0 |
| FERROCYTOCHROME V(GAMMA) | — | 0 |
| NO | — | 0 |
Catalyzed reactions (Rhea), 1 shown:
- N(omega)-hydroxy-L-arginine + 2 Fe(II)-[cytochrome b5] + 2 H(+) = L-arginine + 2 Fe(III)-[cytochrome b5] + H2O (RHEA:61644)
UniProt features (19 total): cross-link 9, sequence variant 3, splice variant 2, transit peptide 1, chain 1, sequence conflict 1, domain 1, modified residue 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q969Z3-F1 | 91.52 | 0.85 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (10): 187, 287, 294, 156, 59, 138, 144, 156, 166, 173
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-211945 | Phase I - Functionalization of compounds |
| R-HSA-1430728 | Metabolism |
| R-HSA-211859 | Biological oxidations |
MSigDB gene sets: 149 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, REACTOME_BIOLOGICAL_OXIDATIONS, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_UP, GOBP_CELLULAR_RESPONSE_TO_TOXIC_SUBSTANCE, AMIT_EGF_RESPONSE_120_HELA, GOBP_REACTIVE_NITROGEN_SPECIES_METABOLIC_PROCESS, GOBP_DETOXIFICATION, GOCC_MITOCHONDRIAL_ENVELOPE, CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5, GOBP_ORGANIC_ACID_METABOLIC_PROCESS, GOBP_RESPONSE_TO_TOXIC_SUBSTANCE, ROSS_AML_WITH_PML_RARA_FUSION, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN
GO Biological Process (4): nitric oxide biosynthetic process (GO:0006809), nitrate metabolic process (GO:0042126), detoxification of nitrogen compound (GO:0051410), cellular detoxification of nitrogen compound (GO:0070458)
GO Molecular Function (8): nitrate reductase activity (GO:0008940), oxidoreductase activity, acting on other nitrogenous compounds as donors (GO:0016661), molybdenum ion binding (GO:0030151), pyridoxal phosphate binding (GO:0030170), molybdopterin cofactor binding (GO:0043546), nitrite reductase activity (GO:0098809), catalytic activity (GO:0003824), oxidoreductase activity (GO:0016491)
GO Cellular Component (4): mitochondrion (GO:0005739), mitochondrial outer membrane (GO:0005741), peroxisome (GO:0005777), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Biological oxidations | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| oxidoreductase activity, acting on other nitrogenous compounds as donors | 2 |
| biosynthetic process | 1 |
| nitric oxide metabolic process | 1 |
| oxoacid metabolic process | 1 |
| reactive nitrogen species metabolic process | 1 |
| detoxification | 1 |
| response to nitrogen compound | 1 |
| cellular response to stress | 1 |
| detoxification of nitrogen compound | 1 |
| cellular detoxification | 1 |
| oxidoreductase activity | 1 |
| transition metal ion binding | 1 |
| anion binding | 1 |
| vitamin B6 binding | 1 |
| binding | 1 |
| molecular_function | 1 |
| catalytic activity | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| mitochondrial membrane | 1 |
| organelle outer membrane | 1 |
| microbody | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
516 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MTARC2 | MOCS2 | O96007 | 910 |
| MTARC2 | MOCS1 | Q9NZB8 | 895 |
| MTARC2 | GPHN | Q9NQX3 | 760 |
| MTARC2 | SUOX | P51687 | 571 |
| MTARC2 | CYB5B | O43169 | 495 |
| MTARC2 | CYB5R3 | P00387 | 425 |
| MTARC2 | ATAD1 | Q8NBU5 | 415 |
| MTARC2 | PTGR3 | Q8N4Q0 | 410 |
| MTARC2 | CYB5A | P00167 | 401 |
| MTARC2 | ACBD5 | Q5T8D3 | 383 |
| MTARC2 | OXCT1 | P55809 | 368 |
| MTARC2 | PXMP4 | Q9Y6I8 | 361 |
| MTARC2 | FAR2 | Q96K12 | 351 |
| MTARC2 | RBBP8NL | Q8NC74 | 340 |
| MTARC2 | C11orf52 | Q96A22 | 339 |
IntAct
29 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SLC31A1 | C2orf72 | psi-mi:“MI:0914”(association) | 0.530 |
| PEX19 | FAM20B | psi-mi:“MI:0914”(association) | 0.530 |
| PEX19 | MYO1D | psi-mi:“MI:0914”(association) | 0.530 |
| HTRA2 | HAX1 | psi-mi:“MI:2364”(proximity) | 0.420 |
| PPP4R1L | IFT56 | psi-mi:“MI:0914”(association) | 0.350 |
| KCNA2 | TMEM129 | psi-mi:“MI:0914”(association) | 0.350 |
| CRELD1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| FTL | SH3PXD2B | psi-mi:“MI:0914”(association) | 0.350 |
| RP2 | QSOX1 | psi-mi:“MI:0914”(association) | 0.350 |
| SAAL1 | QSOX1 | psi-mi:“MI:0914”(association) | 0.350 |
| SYBU | SNPH | psi-mi:“MI:0914”(association) | 0.350 |
| TDRKH | ESPL1 | psi-mi:“MI:0914”(association) | 0.350 |
| MTHFD1L | TRAPPC6B | psi-mi:“MI:0914”(association) | 0.350 |
| PEX19 | KCNN4 | psi-mi:“MI:0914”(association) | 0.350 |
| MTCH1 | IPO5 | psi-mi:“MI:0914”(association) | 0.350 |
| MTCH2 | IPO5 | psi-mi:“MI:0914”(association) | 0.350 |
| FECH | GTPBP10 | psi-mi:“MI:0914”(association) | 0.350 |
| RP2 | STOM | psi-mi:“MI:0914”(association) | 0.350 |
| SAAL1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC30A10 | GOLIM4 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC39A11 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC39A4 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| COX14 | NUDT19 | psi-mi:“MI:2364”(proximity) | 0.270 |
| MGST3 | DNM1L | psi-mi:“MI:2364”(proximity) | 0.270 |
| TOMM20 | NUDT19 | psi-mi:“MI:2364”(proximity) | 0.270 |
| TOMM22 | DNM1L | psi-mi:“MI:2364”(proximity) | 0.270 |
| IMMP2L | MRPL45 | psi-mi:“MI:2364”(proximity) | 0.270 |
| LACTB | NUDT19 | psi-mi:“MI:2364”(proximity) | 0.270 |
BioGRID (67): MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Affinity Capture-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS), MARC2 (Proximity Label-MS)
ESM2 similar proteins: A2VD33, A4IF87, A4IHY0, A6QQV6, B8JMH0, E1BCH6, E1BVR9, E9PYK3, O15228, O46504, O77480, O88994, P09838, P47823, P79106, P83006, P98192, Q14CH1, Q1LWG4, Q1LZH1, Q3U3W5, Q503J2, Q58EJ9, Q5E9H9, Q5I0C5, Q5I0L3, Q5R5S1, Q5RFM7, Q5U534, Q5VT66, Q6PE15, Q7T0X7, Q8BYI6, Q8BYL4, Q8L5Z4, Q8VDG7, Q8VDH1, Q90678, Q91ZW6, Q922Q1
Diamond homologs: O88994, P75863, Q1LZH1, Q21657, Q58EJ9, Q5U534, Q5VT66, Q922Q1, Q969Z3, Q9C5X8, Q9CW42, Q9GKW0, P0C2C3, A2YQD9, O04166, O78510, O80429, O98450, P00220, P00221, P00222, P00224, P00225, P00226, P00227, P00228, P00229, P00230, P00233, P00234, P00235, P00241, P00242, P00243, P00244, P00247, P00248, P00250, P00252, P00253
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
52 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 45 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1746 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:220755157:GC:G | donor_gain | 1.0000 |
| 1:220761656:AG:A | acceptor_gain | 1.0000 |
| 1:220761657:GG:G | acceptor_gain | 1.0000 |
| 1:220761657:GGAT:G | acceptor_gain | 1.0000 |
| 1:220761817:CCAG:C | donor_loss | 1.0000 |
| 1:220761820:GGT:G | donor_loss | 1.0000 |
| 1:220761821:GT:G | donor_loss | 1.0000 |
| 1:220761822:T:A | donor_loss | 1.0000 |
| 1:220762907:AAGGT:A | acceptor_gain | 1.0000 |
| 1:220762908:A:G | acceptor_gain | 1.0000 |
| 1:220781898:GT:G | donor_gain | 1.0000 |
| 1:220781904:A:G | donor_gain | 1.0000 |
| 1:220748757:GC:G | donor_gain | 0.9900 |
| 1:220748800:ACAGG:A | donor_loss | 0.9900 |
| 1:220748801:CAG:C | donor_loss | 0.9900 |
| 1:220748802:AG:A | donor_loss | 0.9900 |
| 1:220748803:GGTAC:G | donor_loss | 0.9900 |
| 1:220748804:GT:G | donor_loss | 0.9900 |
| 1:220748805:T:C | donor_loss | 0.9900 |
| 1:220754941:CTGCA:C | acceptor_loss | 0.9900 |
| 1:220754942:TGCA:T | acceptor_loss | 0.9900 |
| 1:220754943:GCA:G | acceptor_loss | 0.9900 |
| 1:220754944:CAGGT:C | acceptor_loss | 0.9900 |
| 1:220755085:C:T | donor_gain | 0.9900 |
| 1:220755158:C:T | donor_gain | 0.9900 |
| 1:220759456:G:T | donor_gain | 0.9900 |
| 1:220761653:TCCA:T | acceptor_loss | 0.9900 |
| 1:220761655:CA:C | acceptor_loss | 0.9900 |
| 1:220761656:A:AG | acceptor_gain | 0.9900 |
| 1:220761656:A:AT | acceptor_loss | 0.9900 |
AlphaMissense
2187 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:220748729:A:C | K66N | 0.993 |
| 1:220748729:A:T | K66N | 0.993 |
| 1:220748803:G:T | R91M | 0.993 |
| 1:220780024:T:A | W253R | 0.993 |
| 1:220780024:T:C | W253R | 0.993 |
| 1:220781782:C:A | R297S | 0.992 |
| 1:220763010:G:C | R237T | 0.991 |
| 1:220748803:G:C | R91T | 0.990 |
| 1:220748728:A:T | K66I | 0.989 |
| 1:220780079:G:T | R271M | 0.989 |
| 1:220781783:G:C | R297P | 0.989 |
| 1:220781833:G:T | G314W | 0.989 |
| 1:220781834:G:A | G314E | 0.989 |
| 1:220761710:T:A | W167R | 0.988 |
| 1:220761710:T:C | W167R | 0.988 |
| 1:220761750:T:A | V180D | 0.988 |
| 1:220754991:G:C | R106P | 0.987 |
| 1:220748730:T:C | S67P | 0.986 |
| 1:220762916:T:G | Y206D | 0.986 |
| 1:220761680:G:C | G157R | 0.985 |
| 1:220780079:G:C | R271T | 0.985 |
| 1:220780169:T:C | C272R | 0.985 |
| 1:220780168:G:C | R271S | 0.984 |
| 1:220780168:G:T | R271S | 0.984 |
| 1:220780233:T:C | L293P | 0.984 |
| 1:220754947:G:C | R91S | 0.983 |
| 1:220754947:G:T | R91S | 0.983 |
| 1:220754951:T:A | W93R | 0.983 |
| 1:220754951:T:C | W93R | 0.983 |
| 1:220754955:T:C | L94P | 0.983 |
dbSNP variants (sampled 300 via entrez): RS1000093371 (1:220756913 A>AT), RS1000282621 (1:220751392 G>A), RS1000293942 (1:220763319 T>C), RS1000364219 (1:220751584 C>T), RS1000395389 (1:220774304 G>A), RS1000468320 (1:220768500 C>G), RS1000475874 (1:220755848 A>C,G,T), RS1000644434 (1:220763569 C>T), RS1000666527 (1:220747309 G>T), RS1000724350 (1:220784939 C>G), RS1000881521 (1:220752717 T>C), RS1000929602 (1:220779828 A>G), RS1000951738 (1:220773525 G>A), RS1000974014 (1:220757887 A>G), RS1001049043 (1:220758199 G>A,C)
Disease associations
OMIM: gene MIM:614127 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000514_4 | Response to antipsychotic therapy (extrapyramidal side effects) | 6.000000e-06 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4523423 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
44 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| entinostat | affects cotreatment, increases expression | 2 |
| bisphenol S | increases expression, affects cotreatment | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Benzo(a)pyrene | decreases expression, increases methylation | 2 |
| Nickel | decreases expression | 2 |
| Tetrachlorodibenzodioxin | increases expression | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| Valproic Acid | affects expression, increases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| Aflatoxin B1 | decreases expression, decreases methylation | 2 |
| bisphenol F | affects cotreatment, increases expression | 1 |
| fluorene-9-bisphenol | decreases expression | 1 |
| bisphenol A | increases expression | 1 |
| N(4)-hydroxycytidine | affects cotreatment, increases reduction | 1 |
| N(4)-hydroxycytosine | affects cotreatment, increases reduction | 1 |
| perfluorooctanoic acid | decreases expression | 1 |
| nickel sulfate | increases expression | 1 |
| benzamidoxime | affects cotreatment, increases reduction | 1 |
| sulfamethoxazole hydroxylamine | affects cotreatment, increases reduction | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| corosolic acid | decreases expression | 1 |
| K 7174 | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| NSC 689534 | affects binding, decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Acetaminophen | increases expression | 1 |
ChEMBL screening assays
13 unique, capped per target: 11 admet, 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4380149 | ADMET | Substrate activity at human recombinant mARC2 expressed in Escherichia coli assessed as enzyme-mediated N-(4-Aminobutyl)-N’-(2-methoxyethyl)guanidine formation at 3 mM and pH 6 preincubated for 3 mins followed by NADH addition measured afte | Discovery of N-(4-Aminobutyl)-N’-(2-methoxyethyl)guanidine as the First Selective, Nonamino Acid, Catalytic Site Inhibitor of Human Dimethylarginine Dimethylaminohydrolase-1 (hDDAH-1). — J Med Chem |
| CHEMBL6130557 | Binding | Binding affinity to human recombinant mARC2 extracted from Escherichia coli assessed as Km by Michaelis-menten based analysis | mARC1 Is the Main Contributor to Metabolic Reduction of N-Hydroxyurea. — J Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.