MUC1
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Also known as CD227PEMADMCKDADMCKD1MCKDMCDKL-6EMACa15-3
Summary
MUC1 (mucin 1, cell surface associated, HGNC:7508) is a protein-coding gene on chromosome 1q22, encoding Mucin-1 (P15941). The alpha subunit has cell adhesive properties.
This gene encodes a membrane-bound protein that is a member of the mucin family. Mucins are O-glycosylated proteins that play an essential role in forming protective mucous barriers on epithelial surfaces. These proteins also play a role in intracellular signaling. This protein is expressed on the apical surface of epithelial cells that line the mucosal surfaces of many different tissues including lung, breast stomach and pancreas. This protein is proteolytically cleaved into alpha and beta subunits that form a heterodimeric complex. The N-terminal alpha subunit functions in cell-adhesion and the C-terminal beta subunit is involved in cell signaling. Overexpression, aberrant intracellular localization, and changes in glycosylation of this protein have been associated with carcinomas. This gene is known to contain a highly polymorphic variable number tandem repeats (VNTR) domain. Alternate splicing results in multiple transcript variants.
Source: NCBI Gene 4582 — RefSeq curated summary.
At a glance
- Gene–disease (curated): tubulointerstitial kidney disease, autosomal dominant, 2 (Definitive, ClinGen)
- GWAS associations: 34
- Clinical variants (ClinVar): 159 total — 3 pathogenic, 6 likely-pathogenic
- Phenotypes (HPO): 21
- Druggable target: yes
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7508 |
| Approved symbol | MUC1 |
| Name | mucin 1, cell surface associated |
| Location | 1q22 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CD227, PEM, ADMCKD, ADMCKD1, MCKD, MCD, KL-6, EMA, Ca15-3 |
| Ensembl gene | ENSG00000185499 |
| Ensembl biotype | protein_coding |
| OMIM | 158340 |
| Entrez | 4582 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 18 protein_coding, 5 nonsense_mediated_decay, 2 retained_intron, 1 protein_coding_CDS_not_defined
ENST00000337604, ENST00000338684, ENST00000342482, ENST00000343256, ENST00000368389, ENST00000368390, ENST00000368392, ENST00000368393, ENST00000368396, ENST00000368398, ENST00000438413, ENST00000457295, ENST00000462215, ENST00000462317, ENST00000466913, ENST00000467134, ENST00000468978, ENST00000471283, ENST00000485118, ENST00000498431, ENST00000610359, ENST00000610468, ENST00000614519, ENST00000615517, ENST00000620103, ENST00000620770
RefSeq mRNA: 21 — MANE Select: None
NM_001018016, NM_001018017, NM_001044390, NM_001044391, NM_001044392, NM_001044393, NM_001204285, NM_001204286, NM_001204287, NM_001204288, NM_001204289, NM_001204290, NM_001204291, NM_001204292, NM_001204293, NM_001204294, NM_001204295, NM_001204296, NM_001204297, NM_001371720, NM_002456
CCDS: CCDS1098, CCDS30882, CCDS30883, CCDS41408, CCDS41409, CCDS55640, CCDS55641, CCDS55642, CCDS72934, CCDS72935, CCDS72936
Canonical transcript exons
ENST00000337604 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001385434 | 155188163 | 155188285 |
| ENSE00001908335 | 155192786 | 155192868 |
| ENSE00003532193 | 155188008 | 155188063 |
| ENSE00003538960 | 155187722 | 155187858 |
| ENSE00003585635 | 155186123 | 155186209 |
| ENSE00003619154 | 155192183 | 155192283 |
| ENSE00003727475 | 155187455 | 155187576 |
| ENSE00003744251 | 155187225 | 155187374 |
Expression profiles
Bgee: expression breadth ubiquitous, 247 present calls, max score 99.76.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 20.5616 / max 3239.9443, expressed in 1167 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 14910 | 17.2454 | 472 |
| 14913 | 2.2942 | 831 |
| 14911 | 0.5771 | 289 |
| 14906 | 0.3313 | 176 |
| 14907 | 0.1016 | 50 |
| 14912 | 0.0120 | 3 |
Top tissues by expression
280 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| pylorus | UBERON:0001166 | 99.76 | gold quality |
| pancreatic ductal cell | CL:0002079 | 99.66 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 99.65 | gold quality |
| right uterine tube | UBERON:0001302 | 99.55 | gold quality |
| metanephros cortex | UBERON:0010533 | 99.55 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 99.39 | gold quality |
| cardia of stomach | UBERON:0001162 | 99.38 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 99.30 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 99.28 | gold quality |
| lower lobe of lung | UBERON:0008949 | 99.27 | gold quality |
| buccal mucosa cell | CL:0002336 | 99.13 | gold quality |
| mucosa of stomach | UBERON:0001199 | 99.02 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 98.88 | gold quality |
| gall bladder | UBERON:0002110 | 98.88 | gold quality |
| body of pancreas | UBERON:0001150 | 98.73 | gold quality |
| body of stomach | UBERON:0001161 | 98.73 | gold quality |
| bronchial epithelial cell | CL:0002328 | 98.70 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 98.64 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 98.63 | gold quality |
| bronchus | UBERON:0002185 | 98.60 | gold quality |
| upper lobe of lung | UBERON:0008948 | 98.59 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 98.53 | gold quality |
| renal medulla | UBERON:0000362 | 98.52 | gold quality |
| stomach | UBERON:0000945 | 98.42 | gold quality |
| right lung | UBERON:0002167 | 98.39 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 98.29 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 98.00 | gold quality |
| esophagus mucosa | UBERON:0002469 | 97.99 | gold quality |
| rectum | UBERON:0001052 | 97.93 | gold quality |
| visceral pleura | UBERON:0002401 | 97.87 | gold quality |
Single-cell (SCXA)
Detected in 16 experiment(s), a significant marker in 16.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-10855 | yes | 1957.18 |
| E-HCAD-15 | yes | 1641.91 |
| E-MTAB-6308 | yes | 1385.36 |
| E-MTAB-5061 | yes | 1365.47 |
| E-MTAB-6653 | yes | 1230.47 |
| E-MTAB-8221 | yes | 940.08 |
| E-MTAB-10662 | yes | 923.77 |
| E-HCAD-1 | yes | 111.42 |
| E-CURD-114 | yes | 57.46 |
| E-GEOD-125970 | yes | 49.91 |
| E-GEOD-130148 | yes | 24.03 |
| E-MTAB-8410 | yes | 23.34 |
| E-HCAD-10 | yes | 12.32 |
| E-MTAB-6678 | yes | 8.89 |
| E-ENAD-27 | yes | 7.23 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
3 targets.
| Target | Regulation |
|---|---|
| CCN2 | |
| CDKN1A | Activation |
| JUN | Repression |
Upstream regulators (CollecTRI, top): AR, DNMT1, ESR1, ESR2, FOXC1, GATA1, GATA3, HIF1A, MYC, MZF1, NFKB, PGR, PIAS1, PIAS2, PIAS3, PIAS4, PPARA, PPARD, PPARG, RELA, SNAI1, SP1, STAT1, STAT3, STAT5A, STAT5B, TBXT, TP53, YBX3, YY1, ZBTB33, ZEB1
miRNA regulators (miRDB)
3 targeting MUC1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4669 | 97.94 | 62.71 | 224 |
| HSA-MIR-1291 | 96.28 | 65.89 | 1224 |
| HSA-MIR-6775-3P | 95.76 | 65.91 | 982 |
Literature-anchored findings (GeneRIF, showing 40)
- MUC1 immunoreactivity correlates with malignant transformation in the colorectum (PMID:11813869)
- marker for discriminating hepatocellular carcinoma from other carcinomas (PMID:11836704)
- Tyrosine kinase c-Src constitutes a bridge between cystic fibrosis transmembrane regulator channel failure and MUC1 overexpression in cystic fibrosis (PMID:11872746)
- The present results demonstrate that MUC1 associates with protein kinase Cdelta (PKCdelta). (PMID:11877440)
- expression may be very useful predictor of surgical outcome in mass-forming intrahepatic cholangiocarcinoma (PMID:11920540)
- 2 new DHS are in the MUC1 promoter at -750 bp and -250 bp from the transcriptional start site. They are seen in human cell lines and a transgene. The -250 DHS is undetectable in cell lines from colon adenoma to carcinoma with reduced MUC1 expression. (PMID:11984004)
- Endogenous MUC1 from T47D and MCF-7 cell supernatants revealed almost identical O-glycosylation profiles compared with the respective recombinant probes, indicating that the fusion proteins reflected the authentic O-glycan profiles of the cells (PMID:12000758)
- Formation of MUC1 metabolic complex is conserved in tumor-derived and normal epithelial cells (PMID:12054500)
- biosynthesis in breast cancer cell is altered by factors affecting cell proliferation (PMID:12088101)
- Non-glycosylated tandem repeats of MUC1 facilitate attachment of breast tumor cells to normal human lung tissue and immobilized extracellular matrix proteins (ECM) in vitro and have a potential role in metastasis. (PMID:12090474)
- Altered expression and allelic association of the hypervariable membrane mucin MUC1 in Helicobacter pylori gastritis. (PMID:12105832)
- MUC1 is regulated by ZEB1 in epithelial cells (PMID:12161443)
- Constitutive and inducible expression of MUC1 in human T cells (PMID:12372344)
- CD227 is expressed on human and murine activated dendritic cells (PMID:12377938)
- shedding is mediated by tumor necrosis factor-alpha converting enzyme/ADAM 17. (PMID:12441351)
- The invasive behavior of breast cell lines may depend on different expression patterns of the MUCI gene determined by a genetic polymorphism. (PMID:12462382)
- its cDNA used to vaccinate mice to suppress the development of lung metastases (PMID:12553374)
- MUC1/beta-catenin interaction occurs in both primary and metastatic tumors, but is dramatically increased in metastatic lesions. Addition of MUC1-cytoplasmic domain peptides to breast cancer cell lines increases their invasive capability. (PMID:12618757)
- MUC5AC, MUC1 and heparan sulfate proteoglycans cooperated in the formation of a biological inhibitory complex towards the function of E-cadherin in colonic neoplasms (PMID:12640674)
- MUC1 may contribute to the anti-adhesive character of the tubal surface, inhibiting ectopic implantation. (PMID:12646057)
- FUT1 catalyses the addition of alpha-1,2-fucose to MUC1 and MUC5AC apomucins (PMID:12652076)
- results confirm that there is downregulation of MUC1 mucin expression in cancer culture cells treated with selective estrogen receptor modulators (PMID:12724017)
- MUC1 expression was inhibited by NGF treatment in breast cancer tumor cell lines, suggesting that its expression can be regulated by signals resulting from the homodimerization of Erb-B2. (PMID:12798775)
- It was also observed that the mucins from colon carcinoma patients had MUC1-type mucins that carried both sialyl-Lewis a and x epitopes and CD43-type sialyl-Lewis a mucins with only low levels of sialyl-Lewis x epitopes. (PMID:12820726)
- Regulates intracellular oxidant levels and the apoptotic response to oxidative stress in cancer cells (PMID:12826677)
- Two genes predisposing to dominant MCKD, MCKD1 and MCKD2, have been localized to chromosome 1q21 and 16p12. Review. (PMID:12832729)
- A correlation has been found between EMA expression and prognosis in renal cell carcinoma patients who underwent nephrectomy. (PMID:12893366)
- conformational features that contribute to acceptor substrate specificity (PMID:12925576)
- findings demonstrate that MUC1 functions in cross talk between ErbB2 and Wnt pathways by acting as a shuttle for heregulin/neuregulin-1-induced nucleolar targeting of gamma-catenin (PMID:12939402)
- These findings provide the first evidence that MUC1 induces cellular transformation. (PMID:12955090)
- MUC1 and Met can be detected in the axillary fluids of patients with breast cancer; the expression of both tumor markers in the axillary drainage is strongly associated with unfavorable tumor features and can be used as a prognostic factor (PMID:14509156)
- MUC1 splice variant expression is different in pure DCIS compared to DCIS with adjacent invasive cancer (PMID:14534730)
- increased synthesis may be a key element in the host response to infection with oral pathogens (PMID:14578499)
- All salivary gland tumors expressed MUC1. (PMID:14616551)
- In breast cancer patients, MUC1 was detected both in tissue specimens as well as free in serum samples; furthermore, MUC1 can also circulate complexed with IgG and IgM antibodies; accurate measurements should include free and complexed forms. (PMID:14620915)
- First simultaneous kinetic description of O-glycosylation events by human recombinant UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase I at all putative O-glycosylation sites within human mucin MUC1 containing 5 tandem repeats. (PMID:14636048)
- MUC1 cytoplasmic domain coactivates Wnt target gene transcription and confers transformation. (PMID:14688481)
- MUC1 synthesized in the airway cell line showed low levels of sialylation but carried a range of oligo-N-acetyllactosamine structures not seen in the colon carcinoma cell line. (PMID:14707484)
- MUC1 integrates T cell receptor signaling with the beta-catenin pathway (PMID:14766232)
- MUC1 attenuates the apoptotic response to DNA damage and that this oncoprotein confers resistance to genotoxic anticancer agents (PMID:14998492)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Muc1 | ENSMUSG00000042784 |
| rattus_norvegicus | Muc1 | ENSRNOG00000020539 |
| caenorhabditis_elegans | WBGENE00012901 |
Protein
Protein identifiers
Mucin-1 — P15941 (reviewed: P15941)
Alternative names: Breast carcinoma-associated antigen DF3, Cancer antigen 15-3, Carcinoma-associated mucin, Episialin, H23AG, Krebs von den Lungen-6, PEMT, Peanut-reactive urinary mucin, Polymorphic epithelial mucin, Tumor-associated epithelial membrane antigen, Tumor-associated mucin
All UniProt accessions (16): A0A087WTR1, A0A087WVJ0, A0A087WWM2, A0A087WZI8, A0A087WZZ6, A0A087X061, A0A087X0L2, A0A0A0MRB3, A0A0A0MSH4, A0A0C4DGW3, A0A384NPK6, A6ZIE4, B1AVQ7, B6ECB5, P15941, Q7Z536
UniProt curated annotations — full annotation on UniProt →
Function. The alpha subunit has cell adhesive properties. Can act both as an adhesion and an anti-adhesion protein. May provide a protective layer on epithelial cells against bacterial and enzyme attack. The beta subunit contains a C-terminal domain which is involved in cell signaling, through phosphorylations and protein-protein interactions. Modulates signaling in ERK, SRC and NF-kappa-B pathways. In activated T-cells, influences directly or indirectly the Ras/MAPK pathway. Promotes tumor progression. Regulates TP53-mediated transcription and determines cell fate in the genotoxic stress response. Binds, together with KLF4, the PE21 promoter element of TP53 and represses TP53 activity.
Subunit / interactions. The alpha subunit forms a tight, non-covalent heterodimeric complex with the proteolytically-released beta-subunit. Interaction, via the tandem repeat region, with domain 1 of ICAM1 is implicated in cell migration and metastases. Isoform 1 binds directly the SH2 domain of GRB2, and forms a MUC1/GRB2/SOS1 complex involved in RAS signaling. The cytoplasmic tail (MUC1CT) interacts with several proteins such as SRC, CTNNB1 and ERBs. Interaction with the SH2 domain of CSK decreases interaction with GSK3B. Interacts with CTNNB1/beta-catenin and JUP/gamma-catenin and promotes cell adhesion. Interaction with JUP/gamma-catenin is induced by heregulin. Binds PRKCD, ERBB2, ERBB3 and ERBB4. Heregulin (HRG) stimulates the interaction with ERBB2 and, to a much lesser extent, the interaction with ERBB3 and ERBB4. Interacts with P53 in response to DNA damage. Interacts with KLF4. Interacts with estrogen receptor alpha/ESR1, through its DNA-binding domain, and stimulates its transcription activity. Binds ADAM17. Isoform ZD forms disulfide-linked oligomers.
Subcellular location. Apical cell membrane Secreted Secreted Secreted Cell membrane. Cytoplasm. Nucleus.
Tissue specificity. Expressed on the apical surface of epithelial cells, especially of airway passages, breast and uterus. Also expressed in activated and unactivated T-cells. Overexpressed in epithelial tumors, such as breast or ovarian cancer and also in non-epithelial tumor cells. Isoform Y is expressed in tumor cells only.
Post-translational modifications. Highly glycosylated (N- and O-linked carbohydrates and sialic acid). O-glycosylated to a varying degree on serine and threonine residues within each tandem repeat, ranging from mono- to penta-glycosylation. The average density ranges from about 50% in human milk to over 90% in T47D breast cancer cells. Further sialylation occurs during recycling. Membrane-shed glycoproteins from kidney and breast cancer cells have preferentially sialyated core 1 structures, while secreted forms from the same tissues display mainly core 2 structures. The O-glycosylated content is overlapping in both these tissues with terminal fucose and galactose, 2- and 3-linked galactose, 3- and 3,6-linked GalNAc-ol and 4-linked GlcNAc predominating. Differentially O-glycosylated in breast carcinomas with 3,4-linked GlcNAc. N-glycosylation consists of high-mannose, acidic complex-type and hybrid glycans in the secreted form MUC1/SEC, and neutral complex-type in the transmembrane form, MUC1/TM. Proteolytic cleavage in the SEA domain occurs in the endoplasmic reticulum by an autoproteolytic mechanism and requires the full-length SEA domain as well as requiring a Ser, Thr or Cys residue at the P + 1 site. Cleavage at this site also occurs on isoform MUC1/X but not on isoform MUC1/Y. Ectodomain shedding is mediated by ADAM17. Dual palmitoylation on cysteine residues in the CQC motif is required for recycling from endosomes back to the plasma membrane. Phosphorylated on tyrosines and serine residues in the C-terminal. Phosphorylation on tyrosines in the C-terminal increases the nuclear location of MUC1 and beta-catenin. Phosphorylation by PKC delta induces binding of MUC1 to beta-catenin/CTNNB1 and thus decreases the formation of the beta-catenin/E-cadherin complex. Src-mediated phosphorylation inhibits interaction with GSK3B. Src- and EGFR-mediated phosphorylation on Tyr-1229 increases binding to beta-catenin/CTNNB1. GSK3B-mediated phosphorylation on Ser-1227 decreases this interaction but restores the formation of the beta-cadherin/E-cadherin complex. On T-cell receptor activation, phosphorylated by LCK. PDGFR-mediated phosphorylation increases nuclear colocalization of MUC1CT and CTNNB1. The N-terminal sequence has been shown to begin at position 24 or 28.
Disease relevance. MUC1/CA 15-3 is used as a serological clinical marker of breast cancer to monitor response to breast cancer treatment and disease recurrence. Decreased levels over time may be indicative of a positive response to treatment. Conversely, increased levels may indicate disease progression. At an early stage disease, only 21% of patients exhibit high MUC1/CA 15-3 levels, that is why CA 15-3 is not a useful screening test. Most antibodies target the highly immunodominant core peptide domain of 20 amino acid (APDTRPAPGSTAPPAHGVTS) tandem repeats. Some antibodies recognize glycosylated epitopes. Tubulointerstitial kidney disease, autosomal dominant 2 (ADTKD2) [MIM:174000] A form of autosomal dominant tubulointerstitial kidney disease, a genetically heterogeneous disorder characterized by slowly progressive loss of kidney function, bland urinary sediment, hyperuricemia, absent or mildly increased albuminuria, lack of severe hypertension during the early stages, and normal or small kidneys on ultrasound. Renal histology shows variable abnormalities including interstitial fibrosis with tubular atrophy, microcystic dilatation of the tubules, thickening of tubular basement membranes, medullary cysts, and secondary glomerulosclerotic or glomerulocystic changes with abnormal glomerular tufting. There is significant variability, as well as incomplete penetrance. The disease is caused by variants affecting the gene represented in this entry.
Polymorphism. The number of repeats is highly polymorphic. It varies from 21 to 125 in the northern European population. The most frequent alleles contains 41 and 85 repeats. The tandemly repeated icosapeptide underlies polymorphism at three positions: PAPGSTAP[PAQT]AHGVTSAP[DT/ES]R, DT -> ES and the single replacements P -> A, P -> Q and P-> T. The most frequent replacement DT -> ES occurs in up to 50% of the repeats.
Miscellaneous. The name KL-6 was originally that of a murine monoclonal antibody reacting with pulmonary adenocarcinoma cell lines and pulmonary epithelial cells. This antibody recognizes a sialylated carbohydrate chain on MUC1. Lacks the mucin repeats. Lacks the mucin repeats. Exists as a disulfide-linked oligomer.
Isoforms (17)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P15941-1 | 1, A | yes |
| P15941-2 | 2, B | |
| P15941-3 | 3, C | |
| P15941-4 | 4, D | |
| P15941-5 | 5, SEC | |
| P15941-6 | 6, X | |
| P15941-7 | Y, MUC1/Y | |
| P15941-8 | 8, Z | |
| P15941-9 | 9, S | |
| P15941-10 | F | |
| P15941-11 | Y-LSP | |
| P15941-12 | S2 | |
| P15941-13 | M6 | |
| P15941-14 | ZD, J19 | |
| P15941-15 | T10 | |
| P15941-16 | E2 | |
| P15941-17 | J13 |
RefSeq proteins (21): NP_001018016, NP_001018017, NP_001037855, NP_001037856, NP_001037857, NP_001037858, NP_001191214, NP_001191215, NP_001191216, NP_001191217, NP_001191218, NP_001191219, NP_001191220, NP_001191221, NP_001191222, NP_001191223, NP_001191224, NP_001191225, NP_001191226, NP_001358649, NP_002447 (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000082 | SEA_dom | Domain |
| IPR036364 | SEA_dom_sf | Homologous_superfamily |
Pfam: PF01390
UniProt features (149 total): repeat 48, mutagenesis site 21, splice variant 19, glycosylation site 9, sequence conflict 8, modified residue 7, region of interest 6, compositionally biased region 6, strand 4, chain 3, helix 3, short sequence motif 3, sequence variant 2, turn 2, topological domain 2, lipid moiety-binding region 2, signal peptide 1, transmembrane region 1, domain 1, site 1
Structure
Experimental structures (PDB)
23 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6BSC | X-RAY DIFFRACTION | 1.3 |
| 7V64 | X-RAY DIFFRACTION | 1.56 |
| 6BSB | X-RAY DIFFRACTION | 1.6 |
| 6FZQ | X-RAY DIFFRACTION | 1.7 |
| 8S6K | X-RAY DIFFRACTION | 1.75 |
| 6KX1 | X-RAY DIFFRACTION | 1.77 |
| 6FZR | X-RAY DIFFRACTION | 1.8 |
| 8AXH | X-RAY DIFFRACTION | 1.85 |
| 8S6T | X-RAY DIFFRACTION | 1.85 |
| 1SM3 | X-RAY DIFFRACTION | 1.95 |
| 8S6V | X-RAY DIFFRACTION | 1.95 |
| 5T6P | X-RAY DIFFRACTION | 1.97 |
| 6TGG | X-RAY DIFFRACTION | 2 |
| 7V4W | X-RAY DIFFRACTION | 2.1 |
| 5T78 | X-RAY DIFFRACTION | 2.2 |
| 7V7K | X-RAY DIFFRACTION | 2.2 |
| 7Q4I | X-RAY DIFFRACTION | 2.4 |
| 8P6I | X-RAY DIFFRACTION | 2.5 |
| 2FO4 | X-RAY DIFFRACTION | 2.7 |
| 7VAZ | X-RAY DIFFRACTION | 2.73 |
| 7V8Q | X-RAY DIFFRACTION | 3.2 |
| 7VAC | X-RAY DIFFRACTION | 3.5 |
| 2ACM | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P15941-F1 | 47.92 | 0.02 |
Antibody-complex structures (SAbDab): 18 — 1SM3, 5T6P, 5T78, 6FZQ, 6FZR, 6KX1, 6TGG, 7V4W, 7V64, 7V7K, 7V8Q, 7VAC, 7VAZ, 8AXH, 8P6I, 8S6K, 8S6T, 8S6V
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 1097–1098 (cleavage; by autolysis)
Post-translational modifications (9): 1203, 1212, 1218, 1224, 1227, 1229, 1243, 1184, 1186
Glycosylation sites (9): 131, 139, 140, 144, 957, 975, 1029, 1055, 1133
Mutagenesis-validated functional residues (21):
| Position | Phenotype |
|---|---|
| 1098 | completely abrogates cleavage. |
| 1098 | almost complete cleavage. |
| 1116 | greatly reduced formation of isoform 5/isoform y complex. |
| 1116 | no effect on formation of isoform 5/isoform y complex. |
| 1184 | s-palmitoylation reduced by 50%. complete loss of palmitoylation, no effect on endocytosis, recycling inhibited and ap1s |
| 1186 | s-palmitoylation reduced by 50%. complete loss of palmitoylation, no effect on endocytosis, recycling inhibited, and ap1 |
| 1187–1189 | no nuclear targeting of hrg-stimulated muc1 c-terminal nor jup/gamma-catenin. no effect on interaction with jup/gamma-ca |
| 1187–1189 | no effect on palmitoylation. |
| 1191 | no effect on egfr-mediated phosphorylation. |
| 1191 | no effect on endocytosis. |
| 1203 | no effect on nuclear colocalization of muc1ct and ctnnb1. no effect on in vitro pdfgr-induced cell invasiveness. |
| 1203 | no effect on egfr-mediated phosphorylation. no nuclear localization of muc1ct. reduced in vitro pdgfr-induced cell invas |
| 1203 | reduced endocytosis by 30%. greatly reduced binding to ap1s2 and grb2. binding ap1s1 reduced by 25%. reduced endocytosis |
| 1209 | some reduction in egfr-mediated phosphorylation. |
| 1218 | no effect on egfr-mediated phosphorylation. no nuclear colocalization of muc1ct and ctnnb1. |
| 1223 | no change in prkcd- nor gsk3b-mediated phosphorylation. |
| 1224 | loss of prkcd-mediated phosphorylation. decreased prkcd binding. no increased binding to ctnnb1 in the presence of autop |
| 1227 | no change in prkcd-mediated phosphorylation. loss of gsk3b-mediated phosphorylation. ctnnb1. |
| 1229 | greatly reduced egfr- and src-mediated phosphorylation. no nuclear localization of muc1ct. reduced in vitro pdgfr-mediat |
| 1229 | no effect on endocytosis. |
| 1243 | reduces binding to ap1s2 by 33%. greatly reduced binding to grb2. reduced endocytosis by 50%. reduced endocytosis by 77% |
Function
Pathways and Gene Ontology
Reactome pathways
21 pathways
| ID | Pathway |
|---|---|
| R-HSA-5083625 | Defective GALNT3 causes HFTC |
| R-HSA-5083632 | Defective C1GALT1C1 causes TNPS |
| R-HSA-5083636 | Defective GALNT12 causes CRCS1 |
| R-HSA-5621480 | Dectin-2 family |
| R-HSA-6785807 | Interleukin-4 and Interleukin-13 signaling |
| R-HSA-913709 | O-linked glycosylation of mucins |
| R-HSA-977068 | Termination of O-glycan biosynthesis |
| R-HSA-9927418 | Developmental Lineage of Mammary Gland Luminal Epithelial Cells |
| R-HSA-9927426 | Developmental Lineage of Mammary Gland Alveolar Cells |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-1643685 | Disease |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-3781865 | Diseases of glycosylation |
| R-HSA-3906995 | Diseases associated with O-glycosylation of proteins |
| R-HSA-392499 | Metabolism of proteins |
| R-HSA-449147 | Signaling by Interleukins |
| R-HSA-5173105 | O-linked glycosylation |
| R-HSA-5621481 | C-type lectin receptors (CLRs) |
| R-HSA-5668914 | Diseases of metabolism |
| R-HSA-597592 | Post-translational protein modification |
MSigDB gene sets: 349 (showing top):
RNGTGGGC_UNKNOWN, GOBP_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE_BY_P53_CLASS_MEDIATOR, KOBAYASHI_EGFR_SIGNALING_24HR_UP, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_BY_P53_CLASS_MEDIATOR, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, ENK_UV_RESPONSE_KERATINOCYTE_UP, MODULE_45, MODULE_64, GOBP_CELL_CYCLE_PHASE_TRANSITION, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, BROWNE_HCMV_INFECTION_48HR_DN, RICKMAN_METASTASIS_DN, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY
GO Biological Process (6): obsolete negative regulation of transcription by competitive promoter binding (GO:0010944), DNA damage response, signal transduction by p53 class mediator (GO:0030330), mitotic G1 DNA damage checkpoint signaling (GO:0031571), negative regulation of cell adhesion mediated by integrin (GO:0033629), positive regulation of transcription by RNA polymerase II (GO:0045944), negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:1902166)
GO Molecular Function (4): RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), p53 binding (GO:0002039), transcription coregulator activity (GO:0003712), protein binding (GO:0005515)
GO Cellular Component (11): chromatin (GO:0000785), obsolete extracellular space (GO:0005615), nucleus (GO:0005634), Golgi lumen (GO:0005796), plasma membrane (GO:0005886), apical plasma membrane (GO:0016324), vesicle (GO:0031982), extracellular exosome (GO:0070062), extracellular region (GO:0005576), cytoplasm (GO:0005737), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-13 pathways:
| Category | Pathways |
|---|---|
| Diseases associated with O-glycosylation of proteins | 3 |
| Developmental Lineages of the Mammary Gland | 2 |
| Immune System | 2 |
| C-type lectin receptors (CLRs) | 1 |
| Signaling by Interleukins | 1 |
| O-linked glycosylation | 1 |
| O-linked glycosylation of mucins | 1 |
| Diseases of metabolism | 1 |
| Diseases of glycosylation | 1 |
| Cytokine Signaling in Immune system | 1 |
| Post-translational protein modification | 1 |
| Innate Immune System | 1 |
| Disease | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| signal transduction in response to DNA damage | 1 |
| signal transduction by p53 class mediator | 1 |
| mitotic G1 phase | 1 |
| mitotic DNA damage checkpoint signaling | 1 |
| mitotic G1/S transition checkpoint signaling | 1 |
| negative regulation of cell adhesion | 1 |
| cell adhesion mediated by integrin | 1 |
| regulation of cell adhesion mediated by integrin | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| positive regulation of DNA-templated transcription | 1 |
| intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | 1 |
| regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | 1 |
| negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator | 1 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1 |
| cis-regulatory region sequence-specific DNA binding | 1 |
| protein binding | 1 |
| transcription regulator activity | 1 |
| binding | 1 |
| chromosome | 1 |
| intracellular membrane-bounded organelle | 1 |
| Golgi apparatus | 1 |
| intracellular organelle lumen | 1 |
| membrane | 1 |
| cell periphery | 1 |
| apical part of cell | 1 |
| plasma membrane region | 1 |
| membrane-bounded organelle | 1 |
| extracellular vesicle | 1 |
| intracellular anatomical structure | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
29 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| EGFR | MUC1 | psi-mi:“MI:0915”(physical association) | 0.820 |
| MUC1 | EGFR | psi-mi:“MI:0915”(physical association) | 0.820 |
| MUC1 | SRC | psi-mi:“MI:0915”(physical association) | 0.750 |
| SRC | MUC1 | psi-mi:“MI:0914”(association) | 0.750 |
| MUC1 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.520 |
| U2AF2 | MUC1 | psi-mi:“MI:2364”(proximity) | 0.470 |
| U2AF2 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.470 |
| MUC1 | ABL1 | psi-mi:“MI:0915”(physical association) | 0.460 |
| ABL1 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.460 |
| MUC1 | ABL1 | psi-mi:“MI:0403”(colocalization) | 0.460 |
| MUC1 | HIF1A | psi-mi:“MI:0915”(physical association) | 0.400 |
| MUC1 | EP300 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MUC1 | JUN | psi-mi:“MI:0915”(physical association) | 0.400 |
| MUC1 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MET | MUC1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MUC1 | MET | psi-mi:“MI:0915”(physical association) | 0.400 |
| MUC1 | ATP6V0A1 | psi-mi:“MI:0914”(association) | 0.350 |
| MUC1 | psi-mi:“MI:0915”(physical association) | 0.000 | |
| MUC1 | GRB2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (224): MUC1 (Two-hybrid), ATP6V0A2 (Affinity Capture-MS), ATP6V0A1 (Affinity Capture-MS), HBD (Affinity Capture-MS), MUC1 (PCA), MUC1 (Affinity Capture-Luminescence), MUC1 (Reconstituted Complex), ATP6V0A2 (Affinity Capture-MS), TMEM199 (Affinity Capture-MS), ATP6V0A1 (Affinity Capture-MS), ATP11C (Affinity Capture-MS), TMEM59L (Affinity Capture-MS), TMEM63B (Affinity Capture-MS), MYADM (Affinity Capture-MS), TMEM67 (Affinity Capture-MS)
ESM2 similar proteins: A0A023PXQ4, A0A0U1RQI7, A6NJU9, A6NNC1, A8MRT5, A8MUU9, C9JG80, E2RYF6, E5RHQ5, F8W0I5, O13534, O59779, P08399, P0C732, P0C785, P0DTH6, P0DW28, P13208, P15941, P21787, P24856, P39564, P51861, P87269, Q00130, Q01456, Q12444, Q13117, Q1HVI8, Q27905, Q2EEQ3, Q4ZJY7, Q4ZJZ0, Q5SDL7, Q63661, Q69577, Q6B0Y1, Q6RY98, Q6ZQT0, Q6ZRX8
Diamond homologs: P15941, Q02496, Q29435, Q60528, Q8WML4
SIGNOR signaling
10 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| EGFR | “up-regulates activity” | MUC1 | phosphorylation |
| PRKCD | up-regulates | MUC1 | phosphorylation |
| ZAP70 | “up-regulates activity” | MUC1 | phosphorylation |
| LCK | “up-regulates activity” | MUC1 | phosphorylation |
| ABL1 | “up-regulates quantity by stabilization” | MUC1 | phosphorylation |
| SRC | up-regulates | MUC1 | phosphorylation |
| ADAM17 | down-regulates | MUC1 | cleavage |
| GSK3B | “down-regulates activity” | MUC1 | phosphorylation |
| MUC1 | “up-regulates activity” | KLF4 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 10 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| PIP3 activates AKT signaling | 5 | 33.4× | 6e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
159 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 6 |
| Uncertain significance | 103 |
| Likely benign | 25 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (9)
| Variant ID | HGVS | Classification |
|---|---|---|
| 55830 | NC_000001.10:g.(155160963_155162030)insC | Pathogenic |
| 591327 | NM_002456.6(MUC1):c.159+236dup | Pathogenic |
| 974433 | NM_002456.6(MUC1):c.430dup (p.Thr144fs) | Pathogenic |
| 2506459 | NM_001204285.2(MUC1):c.293_296dup (p.Ser100fs) | Likely pathogenic |
| 3065438 | NM_001204285.2(MUC1):c.184del (p.Ser62fs) | Likely pathogenic |
| 3065546 | NM_001204285.2(MUC1):c.1354-1G>A | Likely pathogenic |
| 3779971 | NM_001204286.1(MUC1):c.1078C>T (p.Arg360Ter) | Likely pathogenic |
| 3900022 | NM_001204285.2(MUC1):c.435-27_467del | Likely pathogenic |
| 4292582 | NM_001371720.2(MUC1):c.3478C>T (p.Gln1160Ter) | Likely pathogenic |
SpliceAI
1156 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:155187219:TCTCA:T | donor_loss | 1.0000 |
| 1:155187220:CTCAC:C | donor_loss | 1.0000 |
| 1:155187221:TCA:T | donor_loss | 1.0000 |
| 1:155187222:CA:C | donor_loss | 1.0000 |
| 1:155187223:A:AT | donor_loss | 1.0000 |
| 1:155187224:CCTT:C | donor_gain | 1.0000 |
| 1:155187266:AGCGC:A | donor_gain | 1.0000 |
| 1:155187370:ACAGC:A | acceptor_gain | 1.0000 |
| 1:155187371:CAGC:C | acceptor_gain | 1.0000 |
| 1:155187371:CAGCC:C | acceptor_gain | 1.0000 |
| 1:155187373:GC:G | acceptor_gain | 1.0000 |
| 1:155187374:CC:C | acceptor_gain | 1.0000 |
| 1:155187375:C:CC | acceptor_gain | 1.0000 |
| 1:155187376:T:C | acceptor_loss | 1.0000 |
| 1:155187716:CCTCA:C | donor_loss | 1.0000 |
| 1:155187717:CTCAC:C | donor_loss | 1.0000 |
| 1:155187718:TCACC:T | donor_loss | 1.0000 |
| 1:155187719:CAC:C | donor_loss | 1.0000 |
| 1:155187720:A:AC | donor_gain | 1.0000 |
| 1:155187720:A:AT | donor_loss | 1.0000 |
| 1:155187721:C:CC | donor_gain | 1.0000 |
| 1:155187721:C:CT | donor_loss | 1.0000 |
| 1:155187721:CCG:C | donor_gain | 1.0000 |
| 1:155187854:CTGGC:C | acceptor_gain | 1.0000 |
| 1:155187857:GC:G | acceptor_gain | 1.0000 |
| 1:155187858:CC:C | acceptor_gain | 1.0000 |
| 1:155187859:C:CC | acceptor_gain | 1.0000 |
| 1:155187859:CTGGT:C | acceptor_loss | 1.0000 |
| 1:155187860:T:A | acceptor_loss | 1.0000 |
| 1:155187864:C:CT | acceptor_gain | 1.0000 |
AlphaMissense
1759 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000119738 (1:155186911 A>C), RS1000583252 (1:155185872 G>A), RS1002345236 (1:155193090 CCT>C), RS1002489797 (1:155186303 T>C), RS1003530313 (1:155192700 T>G), RS1003898239 (1:155187825 G>A,C), RS1004177114 (1:155193255 G>C), RS1005182379 (1:155194767 G>A), RS1005297232 (1:155194460 A>G), RS1005357606 (1:155185829 G>A), RS1006913155 (1:155193664 G>T), RS1007023317 (1:155194818 G>A,C), RS1007326115 (1:155193511 C>A,T), RS1008824544 (1:155186187 C>G,T), RS1009460684 (1:155186588 C>G,T)
Disease associations
OMIM: gene MIM:158340 | disease phenotypes: MIM:174000
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| tubulointerstitial kidney disease, autosomal dominant, 2 | Definitive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| tubulointerstitial kidney disease, autosomal dominant, 2 | Definitive | AD |
Mondo (2): tubulointerstitial kidney disease, autosomal dominant, 2 (MONDO:0020726), kidney failure (MONDO:0001106)
Orphanet (2): Autosomal dominant tubulointerstitial kidney disease (Orphanet:34149), MUC1-related autosomal dominant tubulointerstitial kidney disease (Orphanet:88949)
HPO phenotypes
21 total (21 of 21 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000089 | Renal hypoplasia |
| HP:0000092 | Renal tubular atrophy |
| HP:0000096 | Glomerular sclerosis |
| HP:0000108 | Renal corticomedullary cysts |
| HP:0000127 | Renal salt wasting |
| HP:0000822 | Hypertension |
| HP:0001903 | Anemia |
| HP:0001970 | Tubulointerstitial nephritis |
| HP:0001997 | Gout |
| HP:0002048 | Renal cortical atrophy |
| HP:0002120 | Cerebral cortical atrophy |
| HP:0002149 | Hyperuricemia |
| HP:0002615 | Hypotension |
| HP:0003259 | Elevated circulating creatinine concentration |
| HP:0003581 | Adult onset |
| HP:0003774 | Stage 5 chronic kidney disease |
| HP:0004732 | Impaired renal uric acid clearance |
| HP:0005576 | Tubulointerstitial fibrosis |
| HP:0005583 | Tubular basement membrane disintegration |
| HP:0012213 | Decreased glomerular filtration rate |
GWAS associations
34 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000756_6 | Magnesium levels | 2.000000e-36 |
| GCST000879_41 | Crohn’s disease | 2.000000e-13 |
| GCST002860_4 | Magnesium levels | 1.000000e-07 |
| GCST002860_9 | Magnesium levels | 4.000000e-07 |
| GCST002933_1 | Magnesium levels | 9.000000e-12 |
| GCST002990_1 | Gastric adenocarcinoma (histologically verified) | 2.000000e-08 |
| GCST002992_1 | Gastric cancer | 2.000000e-09 |
| GCST002992_2 | Gastric cancer | 8.000000e-10 |
| GCST003010_1 | Gastric cancer | 7.000000e-08 |
| GCST003218_1 | Non-cardia gastric cancer | 6.000000e-17 |
| GCST003254_5 | Urinary albumin-to-creatinine ratio in non-diabetics | 9.000000e-06 |
| GCST003255_4 | Urinary albumin-to-creatinine ratio | 3.000000e-06 |
| GCST004131_70 | Inflammatory bowel disease | 6.000000e-08 |
| GCST004132_44 | Crohn’s disease | 2.000000e-07 |
| GCST005125_1 | Serum magnesium levels | 4.000000e-14 |
| GCST005983_41 | Serum uric acid levels | 9.000000e-16 |
| GCST007294_124 | Body fat distribution (trunk fat ratio) | 8.000000e-35 |
| GCST007294_3 | Body fat distribution (trunk fat ratio) | 6.000000e-21 |
| GCST007294_50 | Body fat distribution (trunk fat ratio) | 1.000000e-15 |
| GCST007295_17 | Body fat distribution (leg fat ratio) | 3.000000e-13 |
| GCST007295_37 | Body fat distribution (leg fat ratio) | 7.000000e-17 |
| GCST007295_72 | Body fat distribution (leg fat ratio) | 1.000000e-28 |
| GCST007725_19 | Serum uric acid levels | 7.000000e-20 |
| GCST007876_142 | Estimated glomerular filtration rate | 5.000000e-10 |
| GCST008646_1 | Gastric cancer | 2.000000e-12 |
| GCST008970_4 | Gout | 4.000000e-06 |
| GCST010696_19 | Cortical thickness (min-P) | 2.000000e-10 |
| GCST010697_10 | Cortical surface area (min-P) | 3.000000e-10 |
| GCST010698_59 | Subcortical volume (min-P) | 9.000000e-10 |
| GCST010699_20 | Brain morphology (min-P) | 7.000000e-10 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004845 | magnesium measurement |
| EFO:0007778 | urinary albumin to creatinine ratio |
| EFO:0004761 | uric acid measurement |
| EFO:0004341 | body fat distribution |
| EFO:0004346 | neuroimaging measurement |
| EFO:0004840 | cortical thickness |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D051437 | Renal Insufficiency | C12.050.351.968.419.780; C12.200.777.419.780; C12.950.419.780 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3580494 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
1 potent at pChembl≥5 of 2 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.52 | Kd | 30 | nM | CHEMBL4443554 |
CTD chemical–gene interactions
116 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Particulate Matter | decreases expression, decreases reaction, increases abundance, increases expression, affects cotreatment | 7 |
| bisphenol A | increases abundance, decreases expression, decreases methylation, increases expression, affects cotreatment (+1 more) | 5 |
| Tobacco Smoke Pollution | increases expression, affects expression, decreases expression | 5 |
| Smoke | increases abundance, increases expression, decreases expression, decreases reaction, affects expression | 4 |
| Air Pollutants | decreases expression, increases abundance, increases expression, affects expression | 3 |
| Benzo(a)pyrene | decreases expression, decreases methylation, increases expression | 3 |
| Valproic Acid | affects cotreatment, increases expression, decreases expression, increases methylation | 3 |
| triphenyl phosphate | affects expression, increases expression | 2 |
| Resveratrol | decreases expression, affects cotreatment | 2 |
| Arsenic | affects methylation, affects expression | 2 |
| Dexamethasone | affects cotreatment, increases expression, decreases reaction | 2 |
| Estradiol | affects binding, increases expression, affects cotreatment, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tretinoin | increases expression, affects cotreatment | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | increases expression, affects response to substance, decreases reaction, increases activity, increases phosphorylation | 2 |
| Cadmium Chloride | increases expression | 2 |
| bisphenol F | decreases expression | 1 |
| napabucasin | decreases expression | 1 |
| ginger extract | affects expression, increases abundance, affects cotreatment | 1 |
| lead acetate | decreases expression | 1 |
| mancozeb | decreases expression | 1 |
| 3,4-dichloroaniline | increases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| trimellitic anhydride | decreases expression | 1 |
| chloramine-T | decreases expression | 1 |
| indole-3-carbinol | decreases expression | 1 |
| sulforaphane | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
ChEMBL screening assays
13 unique, capped per target: 13 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4420821 | Binding | Inhibition of His-tagged MUC1-CD dimerization (unknown origin) assessed as decrease in oligomer formation incubated for 1 hr by SDS-polyacrylamide electrophoresis method based luminescence assay | Small molecule inhibitors of MUC1 and methods of identifying the same |
Cellosaurus cell lines
28 cell lines: 19 cancer cell line, 4 transformed cell line, 4 spontaneously immortalized cell line, 1 undefined cell line type
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_0Q68 | Panc1-MUC1 | Cancer cell line | Male |
| CVCL_0Q69 | Panc1-bC2GnT-M | Cancer cell line | Male |
| CVCL_4E32 | BALB/3T3-APR-MUC1 cl.16 | Undefined cell line type | Sex unspecified |
| CVCL_5I38 | MC-38-MUC-1 | Cancer cell line | Female |
| CVCL_8070 | 211-LCL-MUC1 | Transformed cell line | Male |
| CVCL_8071 | 141-LCL-MUC1 | Transformed cell line | Female |
| CVCL_8725 | KLN205-MUC1 | Cancer cell line | Male |
| CVCL_AV04 | Chor-IN-1 | Cancer cell line | Male |
| CVCL_B1XX | Abcam HeLa MUC1 KO | Cancer cell line | Female |
| CVCL_B8KZ | Abcam HCT 116 MUC1 KO | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00123331 | PHASE4 | COMPLETED | Rapamycin Use in Calcineurin Inhibitor (CNI)-Free Immunosuppression for Stabilization/Improvement of Renal Function After Heart Transplantation |
| NCT00123461 | PHASE4 | COMPLETED | Study of Safety and Efficacy of Doxercalciferol in Patients With Chronic Kidney Disease, Stage 3 or 4, and Secondary Hyperparathyroidism |
| NCT00144118 | PHASE4 | TERMINATED | The Effect of Isoflurane or Sevoflurane on Kidney Function |
| NCT00184769 | PHASE4 | COMPLETED | Growth Hormone Treatment in Infants Aged 1 to 2 Years With Chronic Renal Insufficiency (CRI) and Growth Retardation. |
| NCT00186329 | PHASE4 | COMPLETED | BNP for Cardio-Renal Decompensation Syndrome (BNP-CARDS) |
| NCT00194883 | PHASE4 | SUSPENDED | Effect of Cytokines on Growth of Children With Chronic Kidney Failure |
| NCT00195429 | PHASE4 | COMPLETED | A Study Comparing the Withdrawal of Steroids or Tacrolimus in Kidney Transplant Recipients |
| NCT00195468 | PHASE4 | COMPLETED | Study Comparing Cyclosporine Dose Reduction vs. Cyclosporine Elimination in Kidney Transplant Recipients Taking Sirolimus |
| NCT00195481 | PHASE4 | COMPLETED | Study Evaluating Sirolimus in Kidney Transplant Recipients in India |
| NCT00209417 | PHASE4 | TERMINATED | Renal Effects of Two Iodinated Contrast Media in Patients at Risk Undergoing Computed Tomography |
| NCT00246129 | PHASE4 | COMPLETED | CamTac Trial:Campath-Tacrolimus vs IL2R MoAb/Tacrolimus/MMF in Renal Transplantation |
| NCT00247325 | PHASE4 | COMPLETED | RECOVER:Comparison of Renal Toxicity Between Visipaque(Iodixanol)and Hexabrix(Ioxaglate)in Renal Insufficiency Undergoing Coronary Angiography |
| NCT00254709 | PHASE4 | COMPLETED | Study Evaluating Two Different Sirolimus-based Immunosuppressive Regimens in Elderly Kidney Transplant Recipients |
| NCT00259441 | PHASE4 | COMPLETED | PROMISS: Simvastatin Prevents the Contrast Induced Acute Renal Failure in Patients With Renal Insufficiency Undergoing Coronary Angiography |
| NCT00261820 | PHASE4 | COMPLETED | Study Comparing Two Immunosuppressive Regimens in De Novo Renal Allograft Recipients |
| NCT00266123 | PHASE4 | COMPLETED | Study Comparing Two Sirolimus Regimens vs. Tacrolimus and Mycophenolate Mofetil Regimen in Kidney Transplant Recipients |
| NCT00282217 | PHASE4 | COMPLETED | Study Evaluating Sirolimus in the Treatment of Kidney Transplant |
| NCT00294866 | PHASE4 | COMPLETED | Effect of Paricalcitol on Markers of Inflammation in Hemodialysis Patients |
| NCT00295555 | PHASE4 | COMPLETED | Doxazosin Effects on ABPM in Hypertensive Patients With Diabetic Nephropathy |
| NCT00356954 | PHASE4 | COMPLETED | NASPI: N-Acetylcysteine vs. Ascorbic Acid for Prevention of Contrast Induced Nephropathy in Renal Insufficiency Undergoing Coronary Catheterization |
| NCT00368901 | PHASE4 | COMPLETED | STAAR-2 Clinical Study |
| NCT00369382 | PHASE4 | COMPLETED | Study Of The Safety And Efficacy Of Conversion From A CNI To Sirolimus In Renally-Impaired Heart Transplant Recipients |
| NCT00369733 | PHASE4 | COMPLETED | STAAR-3 Clinical Study |
| NCT00369772 | PHASE4 | COMPLETED | STAAR-1 Clinical Study |
| NCT00396435 | PHASE4 | COMPLETED | Correction of Anaemia and Progression of Renal Failure on Transplanted Patients |
| NCT00412802 | PHASE4 | COMPLETED | Adaptation Dose of Enoxaparin in Moderate Renal Failure Patients With Acute Coronary Syndrome |
| NCT00483275 | PHASE4 | WITHDRAWN | Fall Prevention by Alfacalcidol and Training |
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Related Atlas pages
- Associated diseases: tubulointerstitial kidney disease, autosomal dominant, 2
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): gastric adenocarcinoma, gastric carcinoma, kidney failure, tubulointerstitial kidney disease, autosomal dominant, 2