MYCBP2-AS1

Summary

MYCBP2-AS1 (MYCBP2 antisense RNA 1, HGNC:41023) is a long non-coding RNA gene on chromosome 13q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41023
Approved symbol	MYCBP2-AS1
Name	MYCBP2 antisense RNA 1
Location	13q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236051
Ensembl biotype	lncRNA
Entrez	100874212
RNAcentral	URS000075B177 — lncRNA, 517 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000422231, ENST00000448470, ENST00000450627, ENST00000593933, ENST00000596342, ENST00000627409, ENST00000629771, ENST00000630676, ENST00000631152, ENST00000636737

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422231 — 4 exons

Exon	Start	End
ENSE00001593784	77083010	77083112
ENSE00001667618	77075514	77075584
ENSE00001683709	77087552	77087778
ENSE00001800358	77076816	77076933

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 91.82.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1751 / max 25.0367, expressed in 71 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
135500	0.1751	71

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.82	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.47	gold quality
calcaneal tendon	UBERON:0003701	86.96	gold quality
bone marrow cell	CL:0002092	79.33	gold quality
colonic epithelium	UBERON:0000397	79.19	gold quality
corpus callosum	UBERON:0002336	78.05	gold quality
bone marrow	UBERON:0002371	75.46	gold quality
adrenal tissue	UBERON:0018303	74.63	gold quality
skeletal muscle tissue	UBERON:0001134	71.26	gold quality
cortical plate	UBERON:0005343	69.60	gold quality
muscle tissue	UBERON:0002385	69.54	gold quality
ventricular zone	UBERON:0003053	69.52	gold quality
superior frontal gyrus	UBERON:0002661	68.28	gold quality
skin of leg	UBERON:0001511	67.79	gold quality
tibial artery	UBERON:0007610	67.78	gold quality
ganglionic eminence	UBERON:0004023	67.76	gold quality
skin of abdomen	UBERON:0001416	67.74	gold quality
popliteal artery	UBERON:0002250	67.72	gold quality
zone of skin	UBERON:0000014	67.71	gold quality
subcutaneous adipose tissue	UBERON:0002190	67.70	gold quality
prefrontal cortex	UBERON:0000451	66.72	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.71	gold quality
monocyte	CL:0000576	66.49	gold quality
tonsil	UBERON:0002372	66.34	gold quality
blood	UBERON:0000178	65.49	gold quality
ectocervix	UBERON:0012249	64.89	gold quality
muscle of leg	UBERON:0001383	64.80	gold quality
adipose tissue	UBERON:0001013	64.76	gold quality
uterine cervix	UBERON:0000002	64.53	gold quality
tibial nerve	UBERON:0001323	64.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.