MYL6
gene geneOn this page
Also known as ESMLCMLC3NMMLC1SM
Summary
MYL6 (myosin light chain 6, HGNC:7587) is a protein-coding gene on chromosome 12q13.2, encoding Myosin light polypeptide 6 (P60660). Regulatory light chain of myosin.
Myosin is a hexameric ATPase cellular motor protein. It is composed of two heavy chains, two nonphosphorylatable alkali light chains, and two phosphorylatable regulatory light chains. This gene encodes a myosin alkali light chain that is expressed in smooth muscle and non-muscle tissues. Genomic sequences representing several pseudogenes have been described and two transcript variants encoding different isoforms have been identified for this gene.
Source: NCBI Gene 4637 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 24 total
- Druggable target: yes
- MANE Select transcript:
NM_021019
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7587 |
| Approved symbol | MYL6 |
| Name | myosin light chain 6 |
| Location | 12q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ESMLC, MLC3NM, MLC1SM |
| Ensembl gene | ENSG00000092841 |
| Ensembl biotype | protein_coding |
| OMIM | 609931 |
| Entrez | 4637 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 18 protein_coding, 4 retained_intron, 3 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000293422, ENST00000348108, ENST00000536128, ENST00000546630, ENST00000546845, ENST00000547408, ENST00000547649, ENST00000547703, ENST00000548293, ENST00000548400, ENST00000548580, ENST00000548725, ENST00000549017, ENST00000549392, ENST00000549566, ENST00000550184, ENST00000550639, ENST00000550697, ENST00000551589, ENST00000551954, ENST00000552297, ENST00000864437, ENST00000864438, ENST00000940642, ENST00000958400, ENST00000958401
RefSeq mRNA: 2 — MANE Select: NM_021019
NM_021019, NM_079423
CCDS: CCDS31834, CCDS8906
Canonical transcript exons
ENST00000550697 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002350109 | 56158359 | 56158404 |
| ENSE00003498225 | 56161387 | 56161579 |
| ENSE00003511540 | 56158684 | 56158711 |
| ENSE00003536787 | 56159587 | 56159730 |
| ENSE00003563173 | 56159975 | 56160148 |
| ENSE00003669360 | 56160626 | 56160670 |
| ENSE00003785680 | 56160243 | 56160320 |
Expression profiles
Bgee: expression breadth ubiquitous, 292 present calls, max score 99.95.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 374.8727 / max 3663.4292, expressed in 1828 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 126078 | 371.2928 | 1828 |
| 126081 | 1.1100 | 545 |
| 126079 | 1.1020 | 432 |
| 126082 | 1.0415 | 639 |
| 206743 | 0.2241 | 93 |
| 126080 | 0.1022 | 35 |
Top tissues by expression
295 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| popliteal artery | UBERON:0002250 | 99.95 | gold quality |
| tibial artery | UBERON:0007610 | 99.95 | gold quality |
| lower esophagus | UBERON:0013473 | 99.95 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 99.95 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 99.95 | gold quality |
| left coronary artery | UBERON:0001626 | 99.94 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 99.94 | gold quality |
| ascending aorta | UBERON:0001496 | 99.93 | gold quality |
| thoracic aorta | UBERON:0001515 | 99.93 | gold quality |
| right coronary artery | UBERON:0001625 | 99.93 | gold quality |
| mucosa of stomach | UBERON:0001199 | 99.92 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 99.92 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 99.92 | gold quality |
| stromal cell of endometrium | CL:0002255 | 99.90 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 99.90 | gold quality |
| body of uterus | UBERON:0009853 | 99.90 | gold quality |
| metanephros cortex | UBERON:0010533 | 99.90 | gold quality |
| colonic epithelium | UBERON:0000397 | 99.89 | gold quality |
| rectum | UBERON:0001052 | 99.89 | gold quality |
| transverse colon | UBERON:0001157 | 99.89 | gold quality |
| left uterine tube | UBERON:0001303 | 99.89 | gold quality |
| right lung | UBERON:0002167 | 99.88 | gold quality |
| aorta | UBERON:0000947 | 99.86 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 99.86 | gold quality |
| right adrenal gland | UBERON:0001233 | 99.86 | gold quality |
| monocyte | CL:0000576 | 99.85 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 99.85 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 99.85 | gold quality |
| left adrenal gland | UBERON:0001234 | 99.83 | gold quality |
| calcaneal tendon | UBERON:0003701 | 99.83 | gold quality |
Single-cell (SCXA)
Detected in 38 experiment(s), a significant marker in 20.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-23 | yes | 8356.93 |
| E-HCAD-11 | yes | 6156.61 |
| E-MTAB-10287 | yes | 5853.45 |
| E-MTAB-8381 | yes | 5229.17 |
| E-GEOD-111727 | yes | 2526.59 |
| E-HCAD-9 | yes | 2021.64 |
| E-HCAD-4 | yes | 95.63 |
| E-HCAD-1 | yes | 83.19 |
| E-CURD-122 | yes | 72.58 |
| E-MTAB-8410 | yes | 36.35 |
| E-GEOD-134144 | yes | 32.22 |
| E-MTAB-6678 | yes | 28.68 |
| E-CURD-46 | yes | 28.36 |
| E-GEOD-130148 | yes | 24.43 |
| E-MTAB-9221 | yes | 21.75 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
10 targeting MYL6, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-9718 | 99.94 | 68.91 | 918 |
| HSA-MIR-3065-3P | 99.87 | 70.25 | 1407 |
| HSA-MIR-6739-5P | 99.80 | 67.87 | 2806 |
| HSA-MIR-5002-5P | 99.76 | 70.84 | 1763 |
| HSA-MIR-6733-5P | 99.74 | 67.94 | 2759 |
| HSA-MIR-3153 | 99.55 | 67.59 | 2337 |
| HSA-MIR-5584-5P | 99.49 | 68.22 | 2814 |
| HSA-MIR-377-3P | 99.37 | 70.18 | 1905 |
| HSA-MIR-628-5P | 98.36 | 67.74 | 844 |
| HSA-MIR-3157-5P | 97.41 | 67.61 | 998 |
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | myl6 | ENSDARG00000008494 |
| danio_rerio | zgc:153867 | ENSDARG00000033738 |
| rattus_norvegicus | Myl6 | ENSRNOG00000054140 |
| drosophila_melanogaster | Mlc-c | FBGN0004687 |
| caenorhabditis_elegans | WBGENE00010554 | |
| caenorhabditis_elegans | WBGENE00011734 |
Paralogs (4): MYL3 (ENSG00000160808), MYL1 (ENSG00000168530), MYL6B (ENSG00000196465), MYL4 (ENSG00000198336)
Protein
Protein identifiers
Myosin light polypeptide 6 — P60660 (reviewed: P60660)
Alternative names: 17 kDa myosin light chain, Myosin light chain 3, Myosin light chain alkali 3, Smooth muscle and nonmuscle myosin light chain alkali 6
All UniProt accessions (12): P60660, B7Z6Z4, F8VPF3, F8VXL3, F8VZU9, F8W180, F8W1R7, G3V1V0, G3V1Y7, G8JLA2, H0YI43, J3KND3
UniProt curated annotations — full annotation on UniProt →
Function. Regulatory light chain of myosin. Does not bind calcium.
Subunit / interactions. Myosin is a hexamer of 2 heavy chains and 4 light chains. Interacts with SPATA6.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P60660-1 | Non-muscle, MLC3nm, LC17A, LC17-nm | yes |
| P60660-2 | Smooth muscle, MLC3sm, LC17B, LC17-sm |
RefSeq proteins (2): NP_066299, NP_524147 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002048 | EF_hand_dom | Domain |
| IPR011992 | EF-hand-dom_pair | Homologous_superfamily |
| IPR050230 | CALM/Myosin/TropC-like | Family |
UniProt features (15 total): modified residue 4, sequence conflict 3, domain 3, sequence variant 2, initiator methionine 1, chain 1, splice variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P60660-F1 | 95.39 | 0.97 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4): 135, 2, 57, 81
Function
Pathways and Gene Ontology
Reactome pathways
18 pathways
| ID | Pathway |
|---|---|
| R-HSA-3928663 | EPHA-mediated growth cone collapse |
| R-HSA-416572 | Sema4D induced cell migration and growth-cone collapse |
| R-HSA-445355 | Smooth Muscle Contraction |
| R-HSA-5625740 | RHO GTPases activate PKNs |
| R-HSA-5625900 | RHO GTPases activate CIT |
| R-HSA-5627117 | RHO GTPases Activate ROCKs |
| R-HSA-5627123 | RHO GTPases activate PAKs |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-162582 | Signal Transduction |
| R-HSA-194315 | Signaling by Rho GTPases |
| R-HSA-195258 | RHO GTPase Effectors |
| R-HSA-2682334 | EPH-Ephrin signaling |
| R-HSA-373755 | Semaphorin interactions |
| R-HSA-397014 | Muscle contraction |
| R-HSA-400685 | Sema4D in semaphorin signaling |
| R-HSA-422475 | Axon guidance |
| R-HSA-9675108 | Nervous system development |
| R-HSA-9716542 | Signaling by Rho GTPases, Miro GTPases and RHOBTB3 |
MSigDB gene sets: 247 (showing top):
ATF_B, TGGTGCT_MIR29A_MIR29B_MIR29C, GOBP_MUSCLE_TISSUE_DEVELOPMENT, MODULE_151, KAAB_HEART_ATRIUM_VS_VENTRICLE_UP, SRF_Q5_01, CREB_Q4, SRF_01, SRF_C, GOBP_MUSCLE_STRUCTURE_DEVELOPMENT, GOBP_MUSCLE_CONTRACTION, MODULE_202, GOMF_CYTOSKELETAL_MOTOR_ACTIVITY, GOBP_SKELETAL_MUSCLE_ORGAN_DEVELOPMENT, ATF3_Q6
GO Biological Process (3): muscle contraction (GO:0006936), skeletal muscle tissue development (GO:0007519), muscle filament sliding (GO:0030049)
GO Molecular Function (5): microfilament motor activity (GO:0000146), cytoskeletal motor activity (GO:0003774), calcium ion binding (GO:0005509), structural constituent of muscle (GO:0008307), protein binding (GO:0005515)
GO Cellular Component (8): cytosol (GO:0005829), brush border (GO:0005903), membrane (GO:0016020), myosin complex (GO:0016459), myosin II complex (GO:0016460), unconventional myosin complex (GO:0016461), vesicle (GO:0031982), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-11 pathways:
| Category | Pathways |
|---|---|
| RHO GTPase Effectors | 4 |
| Axon guidance | 2 |
| EPH-Ephrin signaling | 1 |
| Sema4D in semaphorin signaling | 1 |
| Muscle contraction | 1 |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 1 |
| Signaling by Rho GTPases | 1 |
| Semaphorin interactions | 1 |
| Nervous system development | 1 |
| Developmental Biology | 1 |
| Signal Transduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| myosin complex | 2 |
| muscle system process | 1 |
| striated muscle tissue development | 1 |
| skeletal muscle organ development | 1 |
| muscle contraction | 1 |
| actin-myosin filament sliding | 1 |
| cytoskeletal motor activity | 1 |
| polypeptide conformation or assembly isomerase activity | 1 |
| ATP-dependent activity | 1 |
| molecular_function | 1 |
| metal ion binding | 1 |
| structural molecule activity | 1 |
| binding | 1 |
| cytoplasm | 1 |
| microvillus | 1 |
| apical part of cell | 1 |
| cluster of actin-based cell projections | 1 |
| actin cytoskeleton | 1 |
| protein-containing complex | 1 |
| membrane-bounded organelle | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
206 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| NS | PIK3R2 | psi-mi:“MI:0914”(association) | 0.750 |
| NUDT21 | MYL6 | psi-mi:“MI:0915”(physical association) | 0.740 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| MYL6 | ADAMTS12 | psi-mi:“MI:0915”(physical association) | 0.670 |
| ADAMTS12 | MYL6 | psi-mi:“MI:0915”(physical association) | 0.670 |
| RAC1 | COX6C | psi-mi:“MI:0914”(association) | 0.640 |
| ESR1 | MYL6 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| MYH9 | MYL12B | psi-mi:“MI:0914”(association) | 0.640 |
| MYL6 | MYH9 | psi-mi:“MI:0914”(association) | 0.640 |
| MYL6 | GAS2L3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GAS2L3 | MYL6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYL6 | DDIT4L | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYL6 | AGR2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| AGR2 | MYL6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF195 | BAG2 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (366): ADAMTS12 (Two-hybrid), MYL6 (Affinity Capture-MS), NUDT21 (Two-hybrid), MYL6 (Two-hybrid), MYL6 (Affinity Capture-MS), AHCYL1 (Co-fractionation), AHNAK (Co-fractionation), CYC1 (Co-fractionation), MYL6 (Co-fractionation), MYL6 (Co-fractionation), MYL6 (Co-fractionation), MYL6 (Co-fractionation), RAB2A (Co-fractionation), STMN1 (Co-fractionation), TPM2 (Co-fractionation)
ESM2 similar proteins: A0A1S4A695, A0PJX0, A2VE08, B1H2N3, C7A278, O70133, P02607, P05044, P05943, P08207, P16905, P27003, P43246, P43247, P52294, P54275, P60660, P60661, P60662, P83953, Q17QE5, Q1W374, Q1W375, Q1W376, Q1W377, Q259G4, Q3MHE4, Q3T0E8, Q4R518, Q503E9, Q5R844, Q5R909, Q5XXB5, Q5ZKU1, Q5ZML1, Q60605, Q60960, Q64119, Q68FK8, Q6P069
Diamond homologs: A0JNJ5, A2Y609, A3E3H0, A3E4D8, A3E4F9, A4UHC0, A8CEP3, A8I1Q0, F1RRT2, J7HCX7, O14008, O60041, O82018, O94739, P02597, P02598, P02600, P02602, P02604, P02605, P02606, P02607, P04353, P04464, P05419, P05976, P05977, P06742, P06787, P07290, P07291, P07462, P07463, P08053, P08590, P09540, P09541, P09542, P0DH95, P0DH96
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 184 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| RHO GTPases activate PAKs | 8 | 33.7× | 4e-08 |
| RHO GTPases activate CIT | 6 | 28.0× | 5e-06 |
| Signaling by ERBB2 ECD mutants | 5 | 26.0× | 5e-05 |
| GRB2 events in ERBB2 signaling | 5 | 24.6× | 5e-05 |
| Signaling by phosphorylated juxtamembrane, extracellular and kinase domain KIT mutants | 6 | 24.1× | 8e-06 |
| Tie2 Signaling | 5 | 23.3× | 6e-05 |
| RHO GTPases Activate ROCKs | 5 | 23.3× | 6e-05 |
| FCERI mediated MAPK activation | 7 | 18.8× | 6e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| actin filament-based movement | 5 | 25.2× | 7e-04 |
| mRNA stabilization | 6 | 13.8× | 1e-03 |
| substantia nigra development | 5 | 11.5× | 8e-03 |
| Ras protein signal transduction | 8 | 10.3× | 7e-04 |
| positive regulation of cell differentiation | 6 | 10.1× | 4e-03 |
| response to ethanol | 7 | 6.5× | 9e-03 |
| negative regulation of gene expression | 10 | 4.3× | 9e-03 |
| positive regulation of gene expression | 15 | 3.6× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
24 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 12 |
| Likely benign | 2 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1123 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:56158712:G:GA | donor_loss | 1.0000 |
| 12:56159576:T:TA | acceptor_gain | 1.0000 |
| 12:56159786:C:G | donor_gain | 1.0000 |
| 12:56159968:AT:A | acceptor_gain | 1.0000 |
| 12:56159969:T:G | acceptor_gain | 1.0000 |
| 12:56159969:T:TA | acceptor_gain | 1.0000 |
| 12:56159970:GGCAG:G | acceptor_loss | 1.0000 |
| 12:56159971:GCA:G | acceptor_loss | 1.0000 |
| 12:56159972:CA:C | acceptor_loss | 1.0000 |
| 12:56159973:A:AG | acceptor_gain | 1.0000 |
| 12:56159973:A:C | acceptor_loss | 1.0000 |
| 12:56159974:G:GG | acceptor_gain | 1.0000 |
| 12:56159974:GA:G | acceptor_gain | 1.0000 |
| 12:56159974:GAGA:G | acceptor_gain | 1.0000 |
| 12:56159974:GAGAT:G | acceptor_gain | 1.0000 |
| 12:56160094:G:GT | donor_gain | 1.0000 |
| 12:56160095:A:T | donor_gain | 1.0000 |
| 12:56160130:C:T | donor_gain | 1.0000 |
| 12:56160144:ACTGG:A | donor_gain | 1.0000 |
| 12:56160146:TGGGT:T | donor_loss | 1.0000 |
| 12:56160147:GG:G | donor_gain | 1.0000 |
| 12:56160148:GG:G | donor_gain | 1.0000 |
| 12:56160149:G:GA | donor_loss | 1.0000 |
| 12:56160149:G:GG | donor_gain | 1.0000 |
| 12:56160150:T:A | donor_loss | 1.0000 |
| 12:56160238:T:TA | acceptor_gain | 1.0000 |
| 12:56160241:A:AG | acceptor_gain | 1.0000 |
| 12:56160241:AG:A | acceptor_gain | 1.0000 |
| 12:56160241:AGGT:A | acceptor_gain | 1.0000 |
| 12:56160242:G:A | acceptor_gain | 1.0000 |
AlphaMissense
1010 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:56160085:T:C | F96L | 1.000 |
| 12:56160087:T:A | F96L | 1.000 |
| 12:56160087:T:G | F96L | 1.000 |
| 12:56159601:T:C | F16L | 0.999 |
| 12:56159603:C:A | F16L | 0.999 |
| 12:56159603:C:G | F16L | 0.999 |
| 12:56159610:T:C | F19L | 0.999 |
| 12:56159612:T:A | F19L | 0.999 |
| 12:56159612:T:G | F19L | 0.999 |
| 12:56159665:G:C | R37T | 0.999 |
| 12:56159665:G:T | R37M | 0.999 |
| 12:56159666:G:C | R37S | 0.999 |
| 12:56159666:G:T | R37S | 0.999 |
| 12:56160073:G:A | G92R | 0.999 |
| 12:56160073:G:C | G92R | 0.999 |
| 12:56160077:T:C | L93P | 0.999 |
| 12:56160110:T:A | V104D | 0.999 |
| 12:56160137:T:C | L113P | 0.999 |
| 12:56160243:G:T | G117V | 0.999 |
| 12:56159602:T:C | F16S | 0.998 |
| 12:56159608:T:C | L18P | 0.998 |
| 12:56160008:T:C | F70S | 0.998 |
| 12:56160020:T:C | L74P | 0.998 |
| 12:56160074:G:A | G92E | 0.998 |
| 12:56160077:T:A | L93H | 0.998 |
| 12:56160086:T:C | F96S | 0.998 |
| 12:56160088:G:C | D97H | 0.998 |
| 12:56160089:A:T | D97V | 0.998 |
| 12:56160137:T:A | L113H | 0.998 |
| 12:56160148:G:C | G117R | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000074946 (12:56159333 T>C), RS1000265933 (12:56156421 A>G), RS1001165798 (12:56160690 C>T), RS1001492387 (12:56160547 A>C,G), RS1001728908 (12:56161631 T>C), RS1002175197 (12:56157915 C>A,T), RS1003359827 (12:56157384 C>T), RS1003803310 (12:56160470 G>A,T), RS1004303195 (12:56157630 T>C), RS1005514198 (12:56160458 G>A), RS1006510960 (12:56161585 G>A), RS1006935105 (12:56156690 C>G,T), RS1007146383 (12:56160950 T>A), RS1008430607 (12:56158727 T>C), RS1009252883 (12:56160896 G>A)
Disease associations
OMIM: gene MIM:609931 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008916_124 | Asthma | 1.000000e-16 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066273 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.09 | Kd | 81.48 | nM | CHEMBL5653589 |
| 7.09 | ED50 | 81.48 | nM | CHEMBL5653589 |
| 5.24 | Kd | 5790 | nM | CHEMBL3752910 |
| 5.24 | ED50 | 5790 | nM | CHEMBL3752910 |
PubChem BioAssay actives
2 with measured affinity, of 4 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148809: Binding affinity to human MYL6 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0815 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148809: Binding affinity to human MYL6 incubated for 45 mins by Kinobead based pull down assay | kd | 5.7896 | uM |
CTD chemical–gene interactions
66 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, increases expression, affects expression, affects cotreatment, increases methylation | 6 |
| Particulate Matter | decreases expression, increases abundance, affects cotreatment, affects expression, increases expression | 4 |
| sodium arsenite | decreases expression, affects cotreatment, increases abundance, increases expression | 3 |
| Tretinoin | increases expression | 3 |
| Air Pollutants | affects cotreatment, increases abundance, increases expression, decreases expression | 2 |
| Cisplatin | affects cotreatment, decreases expression, increases expression | 2 |
| Doxorubicin | affects expression, increases expression | 2 |
| Estradiol | decreases reaction, increases expression, decreases expression | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| Cadmium Chloride | increases expression | 2 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| TAK-243 | increases sumoylation | 1 |
| dicrotophos | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | increases expression, increases abundance, affects cotreatment | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| 3,3’-diindolylmethane | decreases reaction, increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| lead chloride | increases expression | 1 |
| methacrylaldehyde | increases abundance, affects cotreatment, increases expression | 1 |
| isobutyl alcohol | affects cotreatment, decreases expression, increases abundance | 1 |
| dibenzo(a,l)pyrene | increases expression | 1 |
| phenethyl isothiocyanate | affects binding | 1 |
| pentabromodiphenyl ether | increases expression | 1 |
| chloropicrin | increases expression | 1 |
| monomethylarsonous acid | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| clothianidin | decreases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5651851 | Binding | Binding affinity to human MYL6 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.