MYO15B
gene geneOn this page
Also known as MYO15BP
Summary
MYO15B (myosin XVB, HGNC:14083) is a protein-coding gene on chromosome 17q25.1, encoding Unconventional myosin-XVB (Q96JP2).
Predicted to enable ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to be located in brush border; cytoplasm; and cytoskeleton. Predicted to be part of myosin complex.
Source: NCBI Gene 80022 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 65 total
- MANE Select transcript:
NM_001395058
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:14083 |
| Approved symbol | MYO15B |
| Name | myosin XVB |
| Location | 17q25.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MYO15BP |
| Ensembl gene | ENSG00000266714 |
| Ensembl biotype | protein_coding |
| OMIM | 620915 |
| Entrez | 80022 |
Gene structure
Transcript identifiers
Ensembl transcripts: 37 — 17 retained_intron, 14 nonsense_mediated_decay, 4 protein_coding, 2 protein_coding_CDS_not_defined
ENST00000577296, ENST00000577342, ENST00000577613, ENST00000577785, ENST00000577948, ENST00000577986, ENST00000578005, ENST00000578220, ENST00000578300, ENST00000578564, ENST00000578960, ENST00000579048, ENST00000579052, ENST00000580096, ENST00000580262, ENST00000580414, ENST00000580701, ENST00000580724, ENST00000581612, ENST00000581866, ENST00000582012, ENST00000582561, ENST00000582597, ENST00000583140, ENST00000584323, ENST00000584516, ENST00000584723, ENST00000610429, ENST00000610510, ENST00000612587, ENST00000619501, ENST00000621743, ENST00000633867, ENST00000642007, ENST00000645453, ENST00000687098, ENST00000704641
RefSeq mRNA: 2 — MANE Select: NM_001395058
NM_001309242, NM_001395058
CCDS: CCDS92396
Canonical transcript exons
ENST00000645453 — 64 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002704587 | 75621345 | 75621408 |
| ENSE00002734359 | 75619879 | 75620020 |
| ENSE00003712655 | 75613293 | 75613471 |
| ENSE00003727759 | 75616312 | 75616446 |
| ENSE00003746294 | 75592428 | 75592541 |
| ENSE00003753989 | 75616524 | 75616785 |
| ENSE00003775792 | 75618126 | 75618185 |
| ENSE00003775927 | 75602517 | 75602594 |
| ENSE00003776077 | 75616874 | 75616961 |
| ENSE00003776256 | 75605864 | 75606021 |
| ENSE00003776285 | 75625527 | 75625660 |
| ENSE00003776322 | 75601438 | 75601563 |
| ENSE00003776341 | 75596768 | 75596899 |
| ENSE00003776483 | 75594701 | 75594759 |
| ENSE00003776622 | 75624370 | 75624447 |
| ENSE00003776649 | 75617810 | 75617922 |
| ENSE00003776704 | 75594840 | 75594972 |
| ENSE00003776738 | 75594475 | 75594588 |
| ENSE00003776895 | 75619143 | 75619218 |
| ENSE00003777030 | 75619358 | 75619476 |
| ENSE00003777324 | 75592238 | 75592301 |
| ENSE00003777325 | 75615240 | 75615338 |
| ENSE00003777349 | 75591172 | 75591246 |
| ENSE00003777626 | 75622004 | 75622080 |
| ENSE00003777765 | 75625844 | 75625977 |
| ENSE00003777809 | 75605504 | 75605621 |
| ENSE00003777900 | 75603032 | 75603077 |
| ENSE00003778314 | 75614961 | 75615042 |
| ENSE00003778321 | 75596460 | 75596555 |
| ENSE00003778387 | 75620467 | 75620636 |
| ENSE00003778447 | 75624543 | 75624639 |
| ENSE00003778907 | 75624771 | 75624916 |
| ENSE00003779053 | 75614583 | 75614683 |
| ENSE00003779405 | 75611886 | 75612016 |
| ENSE00003779435 | 75624175 | 75624269 |
| ENSE00003779518 | 75625123 | 75625238 |
| ENSE00003779604 | 75611601 | 75611658 |
| ENSE00003779768 | 75610900 | 75610959 |
| ENSE00003779816 | 75621031 | 75621176 |
| ENSE00003779928 | 75614773 | 75614849 |
| ENSE00003780076 | 75619681 | 75619799 |
| ENSE00003780379 | 75615503 | 75615600 |
| ENSE00003780511 | 75623949 | 75624064 |
| ENSE00003781042 | 75617085 | 75617304 |
| ENSE00003781272 | 75603188 | 75603312 |
| ENSE00003781331 | 75612798 | 75612893 |
| ENSE00003781458 | 75626088 | 75626228 |
| ENSE00003782000 | 75620246 | 75620357 |
| ENSE00003782141 | 75614199 | 75614360 |
| ENSE00003782262 | 75610166 | 75610259 |
| ENSE00003782420 | 75602830 | 75602945 |
| ENSE00003782497 | 75612974 | 75613209 |
| ENSE00003782672 | 75613705 | 75613777 |
| ENSE00003782696 | 75591977 | 75592080 |
| ENSE00003782787 | 75616069 | 75616147 |
| ENSE00003782822 | 75623781 | 75623854 |
| ENSE00003783243 | 75621501 | 75621570 |
| ENSE00003783244 | 75592679 | 75592840 |
| ENSE00003783894 | 75615693 | 75615884 |
| ENSE00003816010 | 75590626 | 75590689 |
| ENSE00003825608 | 75590907 | 75591016 |
| ENSE00003841582 | 75626407 | 75626849 |
| ENSE00003923541 | 75591601 | 75591712 |
| ENSE00003938644 | 75587800 | 75590243 |
Expression profiles
Bgee: expression breadth ubiquitous, 228 present calls, max score 99.49.
FANTOM5 (CAGE): breadth broad, TPM avg 4.4076 / max 606.1729, expressed in 513 samples.
FANTOM5 promoters (9 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 162745 | 2.5264 | 397 |
| 162744 | 0.7155 | 277 |
| 162748 | 0.6164 | 34 |
| 162750 | 0.1938 | 28 |
| 162743 | 0.1686 | 83 |
| 162747 | 0.1558 | 30 |
| 162752 | 0.0157 | 4 |
| 162751 | 0.0086 | 4 |
| 162749 | 0.0068 | 2 |
Top tissues by expression
278 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 99.49 | gold quality |
| left ovary | UBERON:0002119 | 99.36 | gold quality |
| right ovary | UBERON:0002118 | 99.33 | gold quality |
| endocervix | UBERON:0000458 | 99.28 | gold quality |
| body of uterus | UBERON:0009853 | 99.24 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 99.22 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 99.17 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 99.11 | gold quality |
| left uterine tube | UBERON:0001303 | 99.11 | gold quality |
| tibial nerve | UBERON:0001323 | 99.07 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 99.06 | gold quality |
| sural nerve | UBERON:0015488 | 98.97 | gold quality |
| right lung | UBERON:0002167 | 98.81 | gold quality |
| transverse colon | UBERON:0001157 | 98.70 | gold quality |
| granulocyte | CL:0000094 | 98.67 | gold quality |
| metanephros cortex | UBERON:0010533 | 98.66 | gold quality |
| ectocervix | UBERON:0012249 | 98.66 | gold quality |
| gall bladder | UBERON:0002110 | 98.64 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 98.49 | gold quality |
| apex of heart | UBERON:0002098 | 98.35 | gold quality |
| small intestine | UBERON:0002108 | 98.35 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 98.11 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 98.02 | gold quality |
| mucosa of stomach | UBERON:0001199 | 98.01 | gold quality |
| omental fat pad | UBERON:0010414 | 97.91 | gold quality |
| peritoneum | UBERON:0002358 | 97.83 | gold quality |
| rectum | UBERON:0001052 | 97.79 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 97.76 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.74 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 97.65 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.50 |
| E-MTAB-7381 | no | 511.83 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
10 targeting MYO15B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-7160-5P | 99.11 | 67.17 | 2207 |
| HSA-MIR-661 | 99.09 | 65.94 | 2062 |
| HSA-MIR-939-3P | 98.97 | 65.07 | 2347 |
| HSA-MIR-138-5P | 98.43 | 70.49 | 1292 |
| HSA-MIR-7113-5P | 97.88 | 67.33 | 1735 |
| HSA-MIR-299-3P | 97.73 | 66.67 | 773 |
| HSA-MIR-5196-3P | 97.57 | 65.98 | 979 |
| HSA-MIR-6781-5P | 94.61 | 59.49 | 155 |
Literature-anchored findings (GeneRIF, showing 1)
- myosin XVBP is a transcribed pseudogene (myosin XVBP=MYO15BP) (PMID:11964073)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | myo15b | ENSDARG00000074852 |
| mus_musculus | Myo15b | ENSMUSG00000034427 |
| rattus_norvegicus | Myo15b | ENSRNOG00000042445 |
Protein
Protein identifiers
Unconventional myosin-XVB — Q96JP2 (reviewed: Q96JP2)
Alternative names: Myosin XVBP, Unconventional myosin-15B
All UniProt accessions (17): Q96JP2, A0A0J9YVN6, A0A0J9YW04, A0A0J9YW50, A0A0J9YWC2, A0A0J9YX32, A0A0J9YXA6, A0A0J9YXD6, A0A0J9YXG9, A0A0J9YXP9, A0A0J9YXR1, A0A0J9YY01, A0A0J9YYB3, A0A0J9YYJ7, A0A286YF23, A0A8I5KYR5, A0A994J4K4
UniProt curated annotations — full annotation on UniProt →
Subcellular location. Cytoplasm.
Tissue specificity. Detected in brain, stomach and kidney.
Miscellaneous. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.
Similarity. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q96JP2-1 | 1 | yes |
| Q96JP2-2 | 2 |
RefSeq proteins (2): NP_001296171, NP_001381987* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000299 | FERM_domain | Domain |
| IPR000857 | MyTH4_dom | Domain |
| IPR001452 | SH3_domain | Domain |
| IPR001609 | Myosin_head_motor_dom-like | Domain |
| IPR011993 | PH-like_dom_sf | Homologous_superfamily |
| IPR014352 | FERM/acyl-CoA-bd_prot_sf | Homologous_superfamily |
| IPR019748 | FERM_central | Domain |
| IPR019749 | Band_41_domain | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR035489 | MYO15B_SH3 | Domain |
| IPR035963 | FERM_2 | Homologous_superfamily |
| IPR036028 | SH3-like_dom_sf | Homologous_superfamily |
| IPR036961 | Kinesin_motor_dom_sf | Homologous_superfamily |
| IPR038185 | MyTH4_dom_sf | Homologous_superfamily |
| IPR041795 | MyoXV_FERM_C | Domain |
| IPR051567 | Unconventional_Myosin_ATPase | Family |
| IPR059004 | MYO15 | Domain |
Pfam: PF00063, PF00373, PF00784, PF07653, PF26570
UniProt features (50 total): compositionally biased region 17, region of interest 9, sequence conflict 7, domain 6, strand 6, splice variant 2, chain 1, binding site 1, sequence variant 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2DLP | SOLUTION NMR |
Predicted structure (AlphaFold)
No AlphaFold model available for Q96JP2 — AlphaFold DB does not currently provide models for proteins above ~3000 aa.
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (1): 818–825
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 77 (showing top):
BLALOCK_ALZHEIMERS_DISEASE_UP, MODULE_95, PARENT_MTOR_SIGNALING_UP, GAZDA_DIAMOND_BLACKFAN_ANEMIA_ERYTHROID_DN, LIU_PROSTATE_CANCER_DN, RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP, HUTTMANN_B_CLL_POOR_SURVIVAL_UP, WANG_RESPONSE_TO_GSK3_INHIBITOR_SB216763_UP, PURBEY_TARGETS_OF_CTBP1_NOT_SATB1_DN, ZWANG_TRANSIENTLY_UP_BY_2ND_EGF_PULSE_ONLY, MODULE_163, CAMP_UP.V1_DN, JAK2_DN.V1_DN, CBX5_TARGET_GENES, E2F2_TARGET_GENES
GO Biological Process (0):
GO Molecular Function (5): cytoskeletal motor activity (GO:0003774), actin binding (GO:0003779), ATP binding (GO:0005524), nucleotide binding (GO:0000166), protein binding (GO:0005515)
GO Cellular Component (4): cytoplasm (GO:0005737), brush border (GO:0005903), myosin complex (GO:0016459), cytoskeleton (GO:0005856)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| molecular_function | 1 |
| cytoskeletal protein binding | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
| microvillus | 1 |
| apical part of cell | 1 |
| cluster of actin-based cell projections | 1 |
| actin cytoskeleton | 1 |
| protein-containing complex | 1 |
| intracellular membraneless organelle | 1 |
Protein interactions and networks
STRING
980 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MYO15B | HRCT1 | Q6UXD1 | 560 |
| MYO15B | SPACA6 | W5XKT8 | 543 |
| MYO15B | CCDC177 | Q9NQR7 | 537 |
| MYO15B | A0A0G2JMU2 | A0A0G2JMU2 | 519 |
| MYO15B | OR7E24 | Q6IFN5 | 499 |
| MYO15B | POTEB3 | A0JP26 | 495 |
| MYO15B | MAGEB6B | A0A0J9YX57 | 480 |
| MYO15B | GPSM1 | Q86YR5 | 474 |
| MYO15B | FOXN4 | Q96NZ1 | 453 |
| MYO15B | TEKT5 | Q96M29 | 445 |
| MYO15B | SERINC4 | A6NH21 | 431 |
| MYO15B | ESX1 | Q8N693 | 431 |
| MYO15B | CIMIP2A | Q6J272 | 418 |
| MYO15B | PDHA1 | P08559 | 410 |
| MYO15B | ATXN2 | Q99700 | 402 |
IntAct
258 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MYO15B | GADD45GIP1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | RCN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | MYOZ3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ERAS | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZBTB32 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | NUP62 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | KLHL12 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZNF774 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZBTB3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | CRX | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | SSBP4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | POU6F2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | KRT75 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZBED1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | NOTCH2NLC | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | KRT35 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | GPRASP3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZNF837 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | IHO1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | KCNJ6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | REL | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | TRIM27 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | PAK5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | PKNOX2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | NADSYN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZBTB8A | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | TFIP11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO15B | ZBTB10 | psi-mi:“MI:0915”(physical association) | 0.560 |
ESM2 similar proteins: A1L0T3, A1L4H1, A6QNY1, D3YZF7, O95428, P28698, P30203, P55068, P55106, P59222, P98162, Q04756, Q14767, Q28019, Q28062, Q28256, Q28343, Q28670, Q3U515, Q4G0T1, Q5F378, Q5HZW5, Q61003, Q61361, Q6H9L7, Q6KF10, Q6PGE4, Q6QNF4, Q7TQH7, Q7Z4F1, Q86T13, Q86VR7, Q86VZ4, Q8BV57, Q8BZE1, Q8CB67, Q8VCP9, Q8WTU2, Q91V98, Q96DN2
Diamond homologs: A0MP03, A1C4A5, A1DBH2, A2R5J1, A3LYL7, A4RE77, A6SED8, A6ZZJ1, A8N2Y6, B0I1T2, B0Y9Q4, D3ZJP6, E9Q634, F4HWY6, F4HXP9, F4I460, F4I507, F4I5Q6, F4IRU3, F4IUG9, F4IVR7, F4JIU4, F4JM19, F4K0A6, F4K5J1, F8VQB6, K7U9N8, O00159, O00160, O43795, O74805, P05659, P08799, P12883, P14105, P19524, P19706, P34092, P35579, P35580
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 82 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| intermediate filament organization | 5 | 15.8× | 5e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
65 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 2 |
| Likely benign | 10 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
11162 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:75590215:G:GT | donor_gain | 1.0000 |
| 17:75590696:G:T | donor_gain | 1.0000 |
| 17:75591614:A:AG | acceptor_gain | 1.0000 |
| 17:75591615:G:GG | acceptor_gain | 1.0000 |
| 17:75592077:AGCA:A | donor_gain | 1.0000 |
| 17:75592078:GCA:G | donor_gain | 1.0000 |
| 17:75592078:GCAG:G | donor_gain | 1.0000 |
| 17:75592081:G:GG | donor_gain | 1.0000 |
| 17:75592236:A:AG | acceptor_gain | 1.0000 |
| 17:75592236:AGAG:A | acceptor_gain | 1.0000 |
| 17:75592236:AGAGG:A | acceptor_gain | 1.0000 |
| 17:75592237:G:GG | acceptor_gain | 1.0000 |
| 17:75592237:GA:G | acceptor_gain | 1.0000 |
| 17:75592237:GAGG:G | acceptor_gain | 1.0000 |
| 17:75592237:GAGGG:G | acceptor_gain | 1.0000 |
| 17:75592461:A:AG | acceptor_gain | 1.0000 |
| 17:75592462:A:G | acceptor_gain | 1.0000 |
| 17:75592600:G:GT | donor_gain | 1.0000 |
| 17:75592836:CAGAG:C | donor_loss | 1.0000 |
| 17:75592838:GAG:G | donor_gain | 1.0000 |
| 17:75592838:GAGGT:G | donor_loss | 1.0000 |
| 17:75592839:AG:A | donor_loss | 1.0000 |
| 17:75592840:GGT:G | donor_loss | 1.0000 |
| 17:75592841:G:T | donor_loss | 1.0000 |
| 17:75592842:T:A | donor_loss | 1.0000 |
| 17:75594965:GCTT:G | donor_gain | 1.0000 |
| 17:75594998:A:T | donor_gain | 1.0000 |
| 17:75596456:CCA:C | acceptor_loss | 1.0000 |
| 17:75596457:CAGG:C | acceptor_loss | 1.0000 |
| 17:75596458:A:AG | acceptor_gain | 1.0000 |
AlphaMissense
19906 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 17:75614224:T:A | W690R | 0.992 |
| 17:75614224:T:C | W690R | 0.992 |
| 17:75619430:C:A | A1320D | 0.989 |
| 17:75601525:T:C | F146L | 0.988 |
| 17:75601527:C:A | F146L | 0.988 |
| 17:75601527:C:G | F146L | 0.988 |
| 17:75602526:T:C | F162L | 0.988 |
| 17:75602528:T:A | F162L | 0.988 |
| 17:75602528:T:G | F162L | 0.988 |
| 17:75602527:T:C | F162S | 0.987 |
| 17:75617919:G:C | K1249N | 0.987 |
| 17:75617919:G:T | K1249N | 0.987 |
| 17:75601526:T:C | F146S | 0.986 |
| 17:75619433:G:C | R1321P | 0.986 |
| 17:75619441:T:A | W1324R | 0.986 |
| 17:75619441:T:C | W1324R | 0.986 |
| 17:75613293:G:C | K597N | 0.985 |
| 17:75613293:G:T | K597N | 0.985 |
| 17:75613294:T:C | F598L | 0.985 |
| 17:75613296:C:A | F598L | 0.985 |
| 17:75613296:C:G | F598L | 0.985 |
| 17:75617915:G:C | R1248P | 0.984 |
| 17:75613300:T:C | S600P | 0.983 |
| 17:75613333:T:C | C611R | 0.983 |
| 17:75613734:T:A | W667R | 0.983 |
| 17:75613734:T:C | W667R | 0.983 |
| 17:75613085:A:C | S556R | 0.982 |
| 17:75613087:C:A | S556R | 0.982 |
| 17:75613087:C:G | S556R | 0.982 |
| 17:75613142:T:A | W575R | 0.982 |
dbSNP variants (sampled 300 via entrez): RS1000125398 (17:75603966 G>A,C), RS1000126605 (17:75602745 G>A), RS1000285813 (17:75597416 C>A), RS1000355611 (17:75626120 G>A), RS1000436977 (17:75592485 A>G), RS1000480819 (17:75599624 A>C,G), RS1000497609 (17:75604209 A>G), RS1000569402 (17:75616597 T>C), RS1000645401 (17:75612433 G>A), RS1000687236 (17:75594778 G>A), RS1000756248 (17:75593254 A>G), RS1000834929 (17:75589668 G>A,T), RS1000977983 (17:75606725 A>G), RS1000988877 (17:75618690 T>C), RS1001056833 (17:75601861 C>T)
Disease associations
OMIM: gene MIM:620915 | disease phenotypes: MIM:117000
GenCC curated gene-disease
Mondo (1): congenital myopathy (MONDO:0019952)
Orphanet (1): Congenital myopathy (Orphanet:97245)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
30 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, increases expression | 2 |
| Acetaminophen | decreases expression | 2 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| sotorasib | affects cotreatment, decreases expression | 1 |
| bisphenol A | increases methylation | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| beta-lapachone | decreases expression | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| 1-hydroxypyrene | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| jinfukang | increases expression | 1 |
| trametinib | affects cotreatment, decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| NVP-BKM120 | affects cotreatment, decreases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Air Pollutants, Occupational | decreases expression | 1 |
| Amphotericin B | increases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cadmium | decreases expression, increases abundance | 1 |
| Caffeine | decreases phosphorylation | 1 |
| Cisplatin | decreases expression | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Nickel | decreases expression | 1 |
| Ozone | increases abundance, affects expression | 1 |
| Smoke | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Valproic Acid | decreases expression, increases methylation | 1 |
| Acrylamide | decreases expression | 1 |
Clinical trials (associated diseases)
13 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02020187 | Not specified | COMPLETED | Aerobic Training in Patients With Congenital Myopathies |
| NCT03018184 | Not specified | COMPLETED | Contractile Cross Sectional Areas and Muscle Strength in Patients With Congenital Myopathies |
| NCT04733976 | Not specified | COMPLETED | Bullying in Youth With Muscular Dystrophy and Congenital Myopathies |
| NCT05099107 | Not specified | COMPLETED | Changes of Motor Function Tests in Congenital Myopathy Subjects Treated With Oral Salbutamol as Compared to no Treatment |
| NCT05199246 | Not specified | COMPLETED | Assessment of Safety and Acute Effects of a Lower-limb Powered Dermoskeleton in Patients With Neuromuscular Disorders |
| NCT05200702 | Not specified | COMPLETED | Assessment of Safety and Acute Effects of a Knee-hip Powered Soft Exoskeleton in Patients With Neuromuscular Disorders |
| NCT05692349 | Not specified | UNKNOWN | Magnetic Resonance Imaging and Ultrasonography in Evaluation of Muscle Diseases |
| NCT06791369 | Not specified | NOT_YET_RECRUITING | The Prevalence of RYR1-related Disease |
| NCT06833489 | Not specified | RECRUITING | Transcriptomic Analysis to Put an End to Misdiagnosis in Patients With Rare Muscle Diseases |
| NCT07138963 | Not specified | RECRUITING | Phenotype - Genotype Correlation in a Sample of Egyptian Patients With Congenital Myopathies and Congenital Muscular Dystrophies |
| NCT07415837 | Not specified | RECRUITING | Evaluation of the Role of miR-1 in the Pathogenesis and as a Biomarker in Muscular Dystrophies and Congenital Myopathies |
| NCT07502989 | Not specified | RECRUITING | Muscle Health Measurements Using Electrical Impedance Myography |
| NCT07580365 | Not specified | NOT_YET_RECRUITING | VirtualPark_Pediatric |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): congenital myopathy