MYO5B
geneOn this page
Also known as KIAA1119
Summary
MYO5B (myosin VB, HGNC:7603) is a protein-coding gene on chromosome 18q21.1, encoding Unconventional myosin-Vb (Q9ULV0). May be involved in vesicular trafficking via its association with the CART complex.
The protein encoded by this gene, together with other proteins, may be involved in plasma membrane recycling. Mutations in this gene are associated with microvillous inclusion disease.
Source: NCBI Gene 4645 — RefSeq curated summary.
At a glance
- Gene–disease (curated): microvillus inclusion disease (Definitive, GenCC) — +3 more curated relationships
- GWAS associations: 29
- Clinical variants (ClinVar): 1,760 total — 72 pathogenic, 32 likely-pathogenic
- Phenotypes (HPO): 35
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity no evidence
- MANE Select transcript:
NM_001080467
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7603 |
| Approved symbol | MYO5B |
| Name | myosin VB |
| Location | 18q21.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KIAA1119 |
| Ensembl gene | ENSG00000167306 |
| Ensembl biotype | protein_coding |
| OMIM | 606540 |
| Entrez | 4645 |
Gene structure
Transcript identifiers
Ensembl transcripts: 13 — 6 protein_coding, 4 protein_coding_CDS_not_defined, 3 retained_intron
ENST00000285039, ENST00000324581, ENST00000585859, ENST00000586036, ENST00000587895, ENST00000589568, ENST00000592688, ENST00000697217, ENST00000697218, ENST00000697219, ENST00000697220, ENST00000697221, ENST00000908785
RefSeq mRNA: 1 — MANE Select: NM_001080467
NM_001080467
CCDS: CCDS42436
Canonical transcript exons
ENST00000285039 — 40 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001591700 | 49929512 | 49929598 |
| ENSE00001599223 | 49937245 | 49937397 |
| ENSE00001602191 | 49954313 | 49954435 |
| ENSE00001603626 | 49962266 | 49962406 |
| ENSE00001619677 | 50036850 | 50036994 |
| ENSE00001620273 | 49992288 | 49992431 |
| ENSE00001621311 | 49902594 | 49902833 |
| ENSE00001624062 | 49853449 | 49853647 |
| ENSE00001637290 | 49974350 | 49974615 |
| ENSE00001642477 | 49841365 | 49841454 |
| ENSE00001648723 | 49894941 | 49895174 |
| ENSE00001661470 | 49984718 | 49984825 |
| ENSE00001668887 | 49837517 | 49837802 |
| ENSE00001679048 | 49912062 | 49912173 |
| ENSE00001686051 | 49847146 | 49847289 |
| ENSE00001712603 | 49863227 | 49863327 |
| ENSE00001713648 | 49856813 | 49856890 |
| ENSE00001719464 | 49990439 | 49990520 |
| ENSE00001731429 | 49843241 | 49843392 |
| ENSE00001732195 | 49953260 | 49953343 |
| ENSE00001733141 | 49904672 | 49904828 |
| ENSE00001734130 | 49878945 | 49879090 |
| ENSE00001745736 | 49849567 | 49849660 |
| ENSE00001751252 | 49880371 | 49880455 |
| ENSE00001761426 | 50001255 | 50001411 |
| ENSE00001764586 | 49877763 | 49877882 |
| ENSE00001776439 | 49962949 | 49963030 |
| ENSE00001795440 | 49980444 | 49980553 |
| ENSE00001802381 | 50040143 | 50040314 |
| ENSE00001802969 | 49839144 | 49839294 |
| ENSE00001803296 | 49906419 | 49906630 |
| ENSE00002219727 | 49822789 | 49826623 |
| ENSE00002296658 | 49936252 | 49936349 |
| ENSE00002302584 | 50194767 | 50195147 |
| ENSE00003461354 | 49864141 | 49864380 |
| ENSE00003474654 | 49872167 | 49872232 |
| ENSE00003531775 | 49875687 | 49875827 |
| ENSE00003534683 | 49835344 | 49835424 |
| ENSE00003583430 | 50055268 | 50055378 |
| ENSE00003675279 | 49836711 | 49836885 |
Expression profiles
Bgee: expression breadth ubiquitous, 228 present calls, max score 97.95.
FANTOM5 (CAGE): breadth broad, TPM avg 6.0165 / max 243.7830, expressed in 834 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 171937 | 2.3570 | 536 |
| 171934 | 1.1889 | 394 |
| 171940 | 1.0030 | 507 |
| 171939 | 0.6724 | 430 |
| 171933 | 0.4105 | 186 |
| 171931 | 0.1820 | 83 |
| 171938 | 0.1061 | 50 |
| 171932 | 0.0815 | 36 |
| 171936 | 0.0117 | 3 |
| 171935 | 0.0032 | 1 |
Top tissues by expression
257 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ileal mucosa | UBERON:0000331 | 97.95 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 96.03 | gold quality |
| jejunal mucosa | UBERON:0000399 | 95.58 | gold quality |
| pancreatic ductal cell | CL:0002079 | 95.43 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 95.40 | gold quality |
| rectum | UBERON:0001052 | 94.11 | gold quality |
| cortical plate | UBERON:0005343 | 93.88 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 93.56 | gold quality |
| duodenum | UBERON:0002114 | 92.77 | gold quality |
| colonic mucosa | UBERON:0000317 | 92.75 | gold quality |
| islet of Langerhans | UBERON:0000006 | 92.58 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 92.14 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 91.35 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 90.93 | gold quality |
| cartilage tissue | UBERON:0002418 | 90.56 | gold quality |
| oocyte | CL:0000023 | 90.39 | gold quality |
| esophagus mucosa | UBERON:0002469 | 90.26 | gold quality |
| secondary oocyte | CL:0000655 | 89.42 | gold quality |
| bronchial epithelial cell | CL:0002328 | 89.33 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 88.97 | gold quality |
| kidney epithelium | UBERON:0004819 | 88.86 | gold quality |
| skin of leg | UBERON:0001511 | 88.56 | gold quality |
| bronchus | UBERON:0002185 | 88.06 | gold quality |
| eye | UBERON:0000970 | 87.93 | gold quality |
| minor salivary gland | UBERON:0001830 | 87.73 | gold quality |
| skin of abdomen | UBERON:0001416 | 86.70 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 86.47 | gold quality |
| thyroid gland | UBERON:0002046 | 86.40 | gold quality |
| pancreas | UBERON:0001264 | 86.09 | gold quality |
| zone of skin | UBERON:0000014 | 86.00 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-7 | yes | 957.23 |
| E-ANND-3 | yes | 8.76 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
189 targeting MYO5B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-223-3P | 99.99 | 70.14 | 1140 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-3692-3P | 99.98 | 70.27 | 2139 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-1236-3P | 99.94 | 68.04 | 1695 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Dominant negative approach suggests MYO5B plays a role in plasma membrane recycling (through early endosomes). (PMID:11408590)
- Data suggest that polarization of hepatocytes requires recruitment of rab11a and myosin Vb to intracellular membranes that contain apical ABC transporters and transcytotic markers. (PMID:16214890)
- myosin Vb is required for CFTR recycling in Rab11a-specific apical recycling endosomes in polarized human airway epithelial cells (PMID:17462998)
- MYO5B mutations cause microvillus inclusion disease and disrupt epithelial cell polarity. (PMID:18724368)
- A shared homozygous mutation in MYO5B in seven affected Navajos with the expected heterozygosity in five parents, was identified. (PMID:19006234)
- related Rab protein, Rab10, can interact with myosin Va, myosin Vb, and myosin Vc (PMID:19008234)
- Myosin Vb was present in nucleoli where it co-localises with RNA polymerase I, and newly synthesised ribosomal RNA. Vb was also found to physically associate with RNA polymerase I and actin in co-immunoprecipitation experiments. (PMID:19610025)
- 15 novel nonsense and missense mutations in MYO5B in 11 unrelated microvillus inclusion disease patients;MYO5B mutations are a major cause of disease (PMID:20186687)
- Molecular analysis of the MYO5B gene is helpful in genetic counseling and prenatal diagnosis of recurrent microvillus inclusion disease in subsequent pregnancies. (PMID:21199752)
- Our functional analysis indicates that MYO5B mutations can be correlated with an aberrant subcellular distribution of the myosin Vb protein, and apical recycling endosomes… (PMID:21206382)
- In polarized epithelial cyst cultures, Myo5B was required for apical membrane trafficking and de novo lumen formation, dependent on association with both Rab8a and Rab11a. (PMID:21282656)
- Inactivation of MYO5B by siRNA against MYO5B can promote cell proliferation, invasion and motility.The expression of MYO5B was downregulated in gastric cancer and inactivation of MYO5B may contribute to tumorigenesis. (PMID:22134786)
- Rab11A/myosin Vb/Rab11-FIP2 complex frames two late recycling steps of langerin from the ERC to the plasma membrane (PMID:22420646)
- MYO5B mutations have divergent effects on the apical membrane system in kidney and intestinal epithelial cells. (PMID:22441677)
- MYO5B is epigenetically silenced in gastric cancer cells by DNA methylation and histone modification. Inactivation of MYO5B in gastric cancer cells expressing MYO5B inhibits HGF-stimulated MET degradation with sustained c-MET levels and signaling. (PMID:23456500)
- The data of this study supported that the MYO5B gene might be associated with schizophrenia in the Chinese Han population. (PMID:23561489)
- the cargo-binding domain (CBD) structures of the three human MyoV paralogs (Va, Vb, and Vc), revealing subtle structural changes that drive functional differentiation and a novel redox mechanism controlling the CBD dimerization process (PMID:24097982)
- Loss of MYO5b causes loss of apical microvilli, formation of inclusion bodies an protein trafficking defects in CaCo2 cells. (PMID:24138727)
- several crystal structures of the myosin Va or the myosin Vb globular tail domain that gives insights into how the motor is linked to the recycling membrane compartments via Rab11 or the melanophilin adaptor that binds to Rab27a. (PMID:24248336)
- Structural insights into the globular tails of the human type v myosins Myo5a, Myo5b, And Myo5c. (PMID:24339992)
- MYO5B-rs555879 is a risk factor for dyslexia in a German cohort. (PMID:24373531)
- Cholestasis in microvillus inclusion disease results from impairment of the MYO5B/RAB11A apical recycling endosome pathway in hepatocytes, altered targeting of bile export pump to the canalicular membrane, and increased ileal bile acid absorption. (PMID:24375397)
- Part of the machinery for ezrin activation depends on recycling endosomes controlled by myosin Vb and Rab11a. (PMID:24413175)
- Microvilli establishment required interaction between RAB8A and MYO5B, while loss of the interaction between RAB11A and MYO5B induced microvillus inclusions. (PMID:24892806)
- Report changes in polarized signaling resulting from Myo5b loss-of-function mutations in microvillus inclusion disease. (PMID:25258405)
- GLUT5 required an interaction cascade of Rab11, Myo5B, Slp4a, Munc18-2, and Vamp7 with Stx3. (PMID:26553929)
- Three novel genes were identified as recurrently mutated; MYCN, MYO5B and VCL, and mutations in these genes were exclusively found in malignant sympathetic paraganglioma tumors. (PMID:26650627)
- Myosin Vb regulates the Cu(+)-stimulated delivery of ATP7B to the apical domain of polarized hepatic cells. (PMID:26823605)
- findings show for the first time that MYO5B deficiency may lead to cholestasis without microvillus inclusion disease (PMID:27532546)
- MYO5B deficiency may underlie 20% of previously undiagnosed low-gamma-glutamyltransferase cholestasis. MYO5B deficiency appears to impair targeting of bile salt export pump to the canalicular membrane with hampered bile acid excretion, resulting in a spectrum of cholestasis without diarrhea. (PMID:28027573)
- Data suggest that single-headed myosin-5B is intermediate-duty ratio motor with kinetic ATPase cycle, rate-limited by phosphate release; in transition to high-duty ratio motor, second head generates strain/gating in myosin-5B dimer that alter kinetic signature by slowing actin-activated ADP release to become rate-limiting; myosin-5B mutations cause microvillus inclusion disease and impact myosin motor function. (PMID:28882893)
- Data suggest that membrane tethering mediated by endosomal RAB11A is drastically and selectively stimulated by its cognate Rab effectors, class V myosins (MYO5A and MYO5B), in a GTP-dependent manner. (RAB11A = ras-related GTPase Rab-11A; MYO5 = myosin class V) (PMID:28939769)
- this study demonstrates the essential role of Myo5b in maintaining the epidermal barrier integrity (PMID:30660668)
- Authors identified a novel role for MYO5B in the regulation of late endosome size control and identify the inability to control late endosome size as an unexpected novel mechanism underlying defects in cell division orientation and epithelial architecture. (PMID:31682603)
- A Molecular Mechanism Underlying Genotype-Specific Intrahepatic Cholestasis Resulting From MYO5B Mutations. (PMID:31750554)
- Mutations in Myosin 5B in Children With Early-onset Cholestasis. (PMID:32304554)
- MYO5B mutations in pheochromocytoma/paraganglioma promote cancer progression. (PMID:32511227)
- Unequal Effects of Myosin 5B Mutations in Liver and Intestine Determine the Clinical Presentation of Low-Gamma-Glutamyltransferase Cholestasis. (PMID:32583448)
- MYO5B-associated diseases: Novel liver-related variants and genotype-phenotype correlation. (PMID:34811877)
- Novel MYO5B mutation in microvillous inclusion disease of Syrian ancestry. (PMID:34815247)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | myo5b | ENSDARG00000062003 |
| mus_musculus | Myo5b | ENSMUSG00000025885 |
| rattus_norvegicus | Myo5b | ENSRNOG00000014104 |
Paralogs (44): MYH13 (ENSG00000006788), MYO16 (ENSG00000041515), MYO9A (ENSG00000066933), MYO3B (ENSG00000071909), MYH7B (ENSG00000078814), MYO15A (ENSG00000091536), MYH7 (ENSG00000092054), MYO3A (ENSG00000095777), MYO9B (ENSG00000099331), MYH9 (ENSG00000100345), MYH14 (ENSG00000105357), MYH1 (ENSG00000109061), MYH3 (ENSG00000109063), MYH2 (ENSG00000125414), MYO1B (ENSG00000128641), MYO5C (ENSG00000128833), CGNL1 (ENSG00000128849), MYH8 (ENSG00000133020), MYH10 (ENSG00000133026), MYH11 (ENSG00000133392), MYO18B (ENSG00000133454), CCDC102A (ENSG00000135736), MYO1G (ENSG00000136286), MYO7A (ENSG00000137474), MYO1F (ENSG00000142347), CGN (ENSG00000143375), TMF1 (ENSG00000144747), MYH15 (ENSG00000144821), MYO10 (ENSG00000145555), CCDC102B (ENSG00000150636), MYO1E (ENSG00000157483), CCDC158 (ENSG00000163749), MYO1A (ENSG00000166866), MYO7B (ENSG00000169994), MYO1H (ENSG00000174527), MYO1D (ENSG00000176658), MYO18A (ENSG00000196535), MYO6 (ENSG00000196586), MYO5A (ENSG00000197535), MYH6 (ENSG00000197616)
Protein
Protein identifiers
Unconventional myosin-Vb — Q9ULV0 (reviewed: Q9ULV0)
All UniProt accessions (4): A0A0A0MR36, A0A8V8TKV2, A0A8V8TM52, Q9ULV0
UniProt curated annotations — full annotation on UniProt →
Function. May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation. Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane. Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells. Together with RAB11A and RAB8A participates in epithelial cell polarization. Together with RAB25 regulates transcytosis. Required for proper localization of bile salt export pump ABCB11 at the apical/canalicular plasma membrane of hepatocytes.
Subunit / interactions. Component of the CART complex, at least composed of ACTN4, HGS/HRS, MYO5B and TRIM3. Interacts with RAB11FIP2, RAB11A, and RAB8A. Found in a complex with CFTR and RAB11A. Interacts with NPC1L1;. Interacts with LIMA1.
Subcellular location. Cytoplasm.
Disease relevance. Diarrhea 2, with microvillus atrophy, with or without cholestasis (DIAR2) [MIM:251850] A disease characterized by onset of intractable life-threatening watery diarrhea during infancy. Two forms are recognized: early-onset microvillus inclusion disease with diarrhea beginning in the neonatal period, and late-onset, with first symptoms appearing after 3 or 4 months of life. The disease is caused by variants affecting the gene represented in this entry. Cholestasis, progressive familial intrahepatic, 10 (PFIC10) [MIM:619868] A form of progressive cholestasis, a disorder characterized by early onset of cholestasis that progresses to hepatic fibrosis, cirrhosis, and end-stage liver disease. PFIC10 is an autosomal recessive form with highly variable phenotype and severity, manifesting in the first months or years of life. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9ULV0-1 | 1 | yes |
| Q9ULV0-2 | 2 | |
| Q9ULV0-3 | 3 |
RefSeq proteins (1): NP_001073936* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000048 | IQ_motif_EF-hand-BS | Binding_site |
| IPR001609 | Myosin_head_motor_dom-like | Domain |
| IPR002710 | Dilute_dom | Domain |
| IPR004009 | SH3_Myosin | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR036103 | MYSc_Myo5 | Domain |
| IPR036961 | Kinesin_motor_dom_sf | Homologous_superfamily |
| IPR037990 | Myo5b_CBD | Domain |
| IPR058662 | Myo5a/b_dom | Domain |
Pfam: PF00063, PF00612, PF01843, PF25966
UniProt features (123 total): sequence variant 66, helix 23, domain 9, region of interest 5, mutagenesis site 4, turn 3, splice variant 3, strand 2, modified residue 2, coiled-coil region 2, compositionally biased region 2, chain 1, binding site 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4J5M | X-RAY DIFFRACTION | 2.07 |
| 4LX0 | X-RAY DIFFRACTION | 2.19 |
| 4LWZ | X-RAY DIFFRACTION | 2.55 |
| 4LNZ | X-RAY DIFFRACTION | 3.11 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9ULV0-F1 | 75.81 | 0.18 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (1): 163–170
Post-translational modifications (2): 1, 1446
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 1300 | abolishes interaction with rab8a and has no effect on rab11a interaction; when associated with c-1307. |
| 1307 | abolishes interaction with rab8a and has no effect on rab11a interaction; when associated with l-1300. |
| 1714 | abolishes interaction with rab11a; has no effect on rab8a interaction. |
| 1748 | abolishes interaction with rab11a; has no effect on rab8a interaction. |
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-432040 | Vasopressin regulates renal water homeostasis via Aquaporins |
| R-HSA-382551 | Transport of small molecules |
| R-HSA-445717 | Aquaporin-mediated transport |
MSigDB gene sets: 251 (showing top):
BENPORATH_ES_WITH_H3K27ME3, GOBP_VESICLE_MEDIATED_TRANSPORT, GOMF_GTPASE_BINDING, MARTINEZ_RB1_TARGETS_UP, CHARAFE_BREAST_CANCER_BASAL_VS_MESENCHYMAL_UP, KYNG_DNA_DAMAGE_BY_GAMMA_RADIATION, GOBP_ACTIN_FILAMENT_ORGANIZATION, GOMF_CYTOSKELETAL_MOTOR_ACTIVITY, GOBP_RENAL_WATER_HOMEOSTASIS, GOBP_MULTICELLULAR_ORGANISMAL_LEVEL_HOMEOSTASIS, GOMF_ACTIN_BINDING, GOBP_IMPORT_INTO_CELL, MARTINEZ_RB1_AND_TP53_TARGETS_UP, GOBP_ENDOCYTOSIS, GOBP_REGULATION_OF_BODY_FLUID_LEVELS
GO Biological Process (6): renal water homeostasis (GO:0003091), endocytosis (GO:0006897), actin filament organization (GO:0007015), protein transport (GO:0015031), vesicle-mediated transport (GO:0016192), endosomal transport (GO:0016197)
GO Molecular Function (9): microfilament motor activity (GO:0000146), calmodulin binding (GO:0005516), ATP binding (GO:0005524), small GTPase binding (GO:0031267), actin filament binding (GO:0051015), nucleotide binding (GO:0000166), cytoskeletal motor activity (GO:0003774), actin binding (GO:0003779), protein binding (GO:0005515)
GO Cellular Component (9): cytoplasm (GO:0005737), actin cytoskeleton (GO:0015629), membrane (GO:0016020), myosin complex (GO:0016459), cytoplasmic vesicle membrane (GO:0030659), protein-containing complex (GO:0032991), apical cortex (GO:0045179), extracellular exosome (GO:0070062), recycling endosome (GO:0055037)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Aquaporin-mediated transport | 1 |
| Transport of small molecules | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| vesicle-mediated transport | 2 |
| transport | 2 |
| cellular anatomical structure | 2 |
| renal system process | 1 |
| multicellular organismal-level water homeostasis | 1 |
| vesicle budding from membrane | 1 |
| membrane invagination | 1 |
| import into cell | 1 |
| actin cytoskeleton organization | 1 |
| supramolecular fiber organization | 1 |
| intracellular protein localization | 1 |
| establishment of protein localization | 1 |
| cellular process | 1 |
| intracellular transport | 1 |
| cytoskeletal motor activity | 1 |
| polypeptide conformation or assembly isomerase activity | 1 |
| ATP-dependent activity | 1 |
| protein binding | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| GTPase binding | 1 |
| actin binding | 1 |
| protein-containing complex binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| molecular_function | 1 |
| cytoskeletal protein binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| cytoskeleton | 1 |
| actin cytoskeleton | 1 |
| protein-containing complex | 1 |
| vesicle membrane | 1 |
| cytoplasmic vesicle | 1 |
| cellular_component | 1 |
| cell cortex region | 1 |
| extracellular vesicle | 1 |
| endosome | 1 |
Protein interactions and networks
STRING
3344 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MYO5B | RAB11A | P24410 | 999 |
| MYO5B | RAB11FIP2 | Q7L804 | 998 |
| MYO5B | RAB8A | P24407 | 991 |
| MYO5B | OPTN | Q96CV9 | 973 |
| MYO5B | RAB25 | P57735 | 931 |
| MYO5B | RAB10 | P61026 | 913 |
| MYO5B | RAB11FIP5 | Q9BXF6 | 900 |
| MYO5B | RAB11FIP1 | Q6WKZ4 | 848 |
| MYO5B | EXOC6 | Q8TAG9 | 752 |
| MYO5B | EPCAM | P16422 | 723 |
| MYO5B | SPINT2 | O43291 | 705 |
| MYO5B | FMN2 | Q9NZ56 | 694 |
| MYO5B | RAB3IP | Q96QF0 | 675 |
| MYO5B | NEUROG3 | Q9Y4Z2 | 651 |
| MYO5B | STX3 | Q13277 | 640 |
IntAct
112 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SMARCB1 | ARID1A | psi-mi:“MI:0914”(association) | 0.860 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| MAPK7 | PFDN6 | psi-mi:“MI:0914”(association) | 0.640 |
| MYO5B | BNIP2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO5B | TCF4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BNIP2 | MYO5B | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO5B | TRIM54 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MYO5B | AMOTL2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRIM54 | MYO5B | psi-mi:“MI:0915”(physical association) | 0.560 |
| AMOTL2 | MYO5B | psi-mi:“MI:0915”(physical association) | 0.560 |
| TCF4 | MYO5B | psi-mi:“MI:0915”(physical association) | 0.560 |
| DKK3 | NME4 | psi-mi:“MI:0914”(association) | 0.530 |
| PEX19 | FAM20B | psi-mi:“MI:0914”(association) | 0.530 |
| MYL2 | MYL5 | psi-mi:“MI:0914”(association) | 0.530 |
| CDR2 | IGSF3 | psi-mi:“MI:0914”(association) | 0.530 |
| CFTR | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.480 |
BioGRID (148): MYO5B (Two-hybrid), TCF4 (Two-hybrid), AMOTL2 (Two-hybrid), TRIM54 (Two-hybrid), MYO5B (Affinity Capture-MS), RAB11FIP2 (Reconstituted Complex), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS), MYO5B (Co-fractionation), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS), MYO5B (Affinity Capture-MS)
ESM2 similar proteins: B2RTY4, E7EZG2, E7F3F0, F4I507, F4JIU4, F4K0A6, O23653, O43502, O43795, O81770, P00860, P09057, P11926, P21271, P27117, P27118, P27119, P27120, P46735, P70569, Q02440, Q05096, Q13459, Q33DR3, Q5VQ09, Q63358, Q6ZLP5, Q86YH6, Q8C170, Q8R2J9, Q8W0Z9, Q99104, Q9FL12, Q9FZ06, Q9FZL4, Q9LFG8, Q9LHE9, Q9LPC6, Q9LYU8, Q9M8Z7
Diamond homologs: A2AQP0, A7E2Y1, F1PT61, F4I507, F4I5Q6, F4IVR7, G3UW82, K7U9N8, O08638, O14157, O94477, P02563, P02564, P02565, P02566, P02567, P04461, P05659, P05661, P08799, P08964, P10587, P11055, P12844, P12845, P12847, P12882, P12883, P13533, P13535, P13538, P13539, P13540, P13541, P13542, P14105, P19524, P21271, P24733, P32492
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 121 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| RHO GTPases activate PAKs | 6 | 43.5× | 2e-06 |
| RHO GTPases activate CIT | 5 | 40.1× | 2e-05 |
| Striated Muscle Contraction | 6 | 24.7× | 2e-05 |
| RHO GTPases activate PKNs | 5 | 21.1× | 4e-04 |
| Translocation of SLC2A4 (GLUT4) to the plasma membrane | 6 | 12.3× | 7e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| actin filament organization | 8 | 9.4× | 2e-03 |
| actin cytoskeleton organization | 8 | 6.3× | 7e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1760 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 72 |
| Likely pathogenic | 32 |
| Uncertain significance | 743 |
| Likely benign | 635 |
| Benign | 159 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1031041 | NM_001080467.3(MYO5B):c.2641C>T (p.Gln881Ter) | Pathogenic |
| 1073731 | NM_001080467.3(MYO5B):c.4126C>T (p.Gln1376Ter) | Pathogenic |
| 1075058 | NM_001080467.3(MYO5B):c.3502del (p.Glu1168fs) | Pathogenic |
| 1301570 | NM_001080467.3(MYO5B):c.2062C>T (p.Arg688Ter) | Pathogenic |
| 1358635 | NM_001080467.3(MYO5B):c.3961G>T (p.Gly1321Ter) | Pathogenic |
| 1389337 | NM_001080467.3(MYO5B):c.3190C>T (p.Arg1064Ter) | Pathogenic |
| 1412155 | NM_001080467.3(MYO5B):c.3550del (p.Gln1184fs) | Pathogenic |
| 1419232 | NM_001080467.3(MYO5B):c.3873G>A (p.Trp1291Ter) | Pathogenic |
| 1454816 | NM_001080467.3(MYO5B):c.1087C>T (p.Arg363Ter) | Pathogenic |
| 1679140 | NM_001080467.3(MYO5B):c.4090C>T (p.Gln1364Ter) | Pathogenic |
| 1686942 | NM_001080467.3(MYO5B):c.274C>T (p.Arg92Cys) | Pathogenic |
| 1686943 | NM_001080467.3(MYO5B):c.2395C>T (p.Arg799Trp) | Pathogenic |
| 1686944 | NM_001080467.3(MYO5B):c.2414+5G>T | Pathogenic |
| 1686945 | NM_001080467.3(MYO5B):c.356A>G (p.Tyr119Cys) | Pathogenic |
| 1686950 | NM_001080467.3(MYO5B):c.2259_2262dup (p.Tyr755fs) | Pathogenic |
| 1686951 | NM_001080467.3(MYO5B):c.1222A>T (p.Ile408Phe) | Pathogenic |
| 1686952 | NM_001080467.3(MYO5B):c.1582C>T (p.Leu528Phe) | Pathogenic |
| 1686955 | NM_001080467.3(MYO5B):c.1489A>T (p.Ile497Phe) | Pathogenic |
| 1686956 | NM_001080467.3(MYO5B):c.1720G>T (p.Glu574Ter) | Pathogenic |
| 1686957 | NM_001080467.3(MYO5B):c.3538-1G>A | Pathogenic |
| 1686959 | NM_001080467.3(MYO5B):c.1021C>T (p.Gln341Ter) | Pathogenic |
| 1686961 | NM_001080467.3(MYO5B):c.1860dup (p.Met621fs) | Pathogenic |
| 1686963 | NM_001080467.3(MYO5B):c.28-2A>G | Pathogenic |
| 1686964 | NM_001080467.3(MYO5B):c.4366C>T (p.Gln1456Ter) | Pathogenic |
| 1686965 | NM_001080467.3(MYO5B):c.4460-1G>C | Pathogenic |
| 1686966 | NM_001080467.3(MYO5B):c.1540T>C (p.Cys514Arg) | Pathogenic |
| 1686967 | NM_001080467.3(MYO5B):c.2330del (p.Gly777fs) | Pathogenic |
| 1908602 | NM_001080467.3(MYO5B):c.896_897dup (p.Asp300fs) | Pathogenic |
| 1934311 | NM_001080467.3(MYO5B):c.5277del (p.Ile1760fs) | Pathogenic |
| 1974743 | NM_001080467.3(MYO5B):c.3823C>T (p.Arg1275Ter) | Pathogenic |
SpliceAI
7024 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 18:49835339:CTCA:C | donor_loss | 1.0000 |
| 18:49835340:TCA:T | donor_loss | 1.0000 |
| 18:49835341:CA:C | donor_loss | 1.0000 |
| 18:49835342:A:AC | donor_gain | 1.0000 |
| 18:49835343:C:CC | donor_gain | 1.0000 |
| 18:49835343:C:CT | donor_loss | 1.0000 |
| 18:49835421:CAAT:C | acceptor_gain | 1.0000 |
| 18:49835424:TCT:T | acceptor_loss | 1.0000 |
| 18:49835424:TCTGT:T | acceptor_loss | 1.0000 |
| 18:49835425:C:CC | acceptor_gain | 1.0000 |
| 18:49835425:C:T | acceptor_loss | 1.0000 |
| 18:49835425:CTGTT:C | acceptor_loss | 1.0000 |
| 18:49835426:T:A | acceptor_loss | 1.0000 |
| 18:49835426:T:G | acceptor_loss | 1.0000 |
| 18:49837512:CTTAC:C | donor_loss | 1.0000 |
| 18:49837514:TACCT:T | donor_loss | 1.0000 |
| 18:49837515:ACCT:A | donor_loss | 1.0000 |
| 18:49837516:C:CT | donor_loss | 1.0000 |
| 18:49837798:AGAAA:A | acceptor_gain | 1.0000 |
| 18:49837799:GAAA:G | acceptor_gain | 1.0000 |
| 18:49837800:AAA:A | acceptor_gain | 1.0000 |
| 18:49837801:AA:A | acceptor_gain | 1.0000 |
| 18:49837803:C:CC | acceptor_gain | 1.0000 |
| 18:49837803:CT:C | acceptor_loss | 1.0000 |
| 18:49837804:T:G | acceptor_loss | 1.0000 |
| 18:49841450:TGCTT:T | acceptor_gain | 1.0000 |
| 18:49841451:GCTTC:G | acceptor_loss | 1.0000 |
| 18:49841452:CTT:C | acceptor_gain | 1.0000 |
| 18:49841453:TT:T | acceptor_gain | 1.0000 |
| 18:49841453:TTC:T | acceptor_loss | 1.0000 |
AlphaMissense
12287 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 18:49836787:A:G | L1746P | 1.000 |
| 18:49837539:A:G | W1706R | 1.000 |
| 18:49837539:A:T | W1706R | 1.000 |
| 18:49837565:A:G | L1697P | 1.000 |
| 18:49929569:A:G | L678P | 1.000 |
| 18:49936284:G:C | C657W | 1.000 |
| 18:49936286:A:G | C657R | 1.000 |
| 18:49936327:A:G | L643P | 1.000 |
| 18:49962358:A:G | W485R | 1.000 |
| 18:49962358:A:T | W485R | 1.000 |
| 18:49962379:A:G | Y478H | 1.000 |
| 18:49962387:T:G | Q475P | 1.000 |
| 18:49962955:G:C | F466L | 1.000 |
| 18:49962955:G:T | F466L | 1.000 |
| 18:49962957:A:G | F466L | 1.000 |
| 18:49962968:A:G | L462P | 1.000 |
| 18:49962985:G:C | N456K | 1.000 |
| 18:49962985:G:T | N456K | 1.000 |
| 18:49963027:A:C | F442L | 1.000 |
| 18:49963027:A:T | F442L | 1.000 |
| 18:49963029:A:G | F442L | 1.000 |
| 18:49974350:C:T | G441E | 1.000 |
| 18:49974351:C:A | G441W | 1.000 |
| 18:49974359:T:A | D438V | 1.000 |
| 18:49974359:T:G | D438A | 1.000 |
| 18:49974362:A:G | L437P | 1.000 |
| 18:49992384:A:C | F220L | 1.000 |
| 18:49992384:A:T | F220L | 1.000 |
| 18:49992386:A:G | F220L | 1.000 |
| 18:49992390:G:C | S218R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000003697 (18:50111121 G>A,T), RS1000003925 (18:49963967 C>T), RS1000007109 (18:49845877 G>A), RS1000007470 (18:49894726 T>C), RS1000010916 (18:50036831 G>A), RS1000013236 (18:50146666 A>G), RS1000020857 (18:50118648 G>A,T), RS1000029906 (18:50109276 G>A), RS1000030308 (18:50188889 A>G), RS1000033745 (18:49852496 C>G,T), RS1000039556 (18:50042728 CGGT>C), RS1000041210 (18:50001696 G>A,C), RS1000046410 (18:49883458 T>C), RS1000048744 (18:49990754 T>C), RS1000053977 (18:50074342 T>C)
Disease associations
OMIM: gene MIM:606540 | disease phenotypes: MIM:251850, MIM:619868, MIM:266600
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| microvillus inclusion disease | Definitive | Autosomal recessive |
| cholestasis, progressive familial intrahepatic, 10 | Strong | Autosomal recessive |
| digestive system disorder | Strong | Autosomal recessive |
| progressive familial intrahepatic cholestasis type 1 | Supportive | Autosomal recessive |
Mondo (5): microvillus inclusion disease (MONDO:0009635), cholestasis, progressive familial intrahepatic, 10 (MONDO:0030810), inflammatory bowel disease 1 (MONDO:0009960), progressive familial intrahepatic cholestasis type 1 (MONDO:0008892), digestive system disorder (MONDO:0004335)
Orphanet (1): Microvillus inclusion disease (Orphanet:2290)
HPO phenotypes
35 total (30 of 35 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000121 | Nephrocalcinosis |
| HP:0000952 | Jaundice |
| HP:0000989 | Pruritus |
| HP:0001263 | Global developmental delay |
| HP:0001508 | Failure to thrive |
| HP:0001510 | Growth delay |
| HP:0001522 | Death in infancy |
| HP:0001744 | Splenomegaly |
| HP:0001942 | Metabolic acidosis |
| HP:0001944 | Dehydration |
| HP:0002014 | Diarrhea |
| HP:0002240 | Hepatomegaly |
| HP:0002242 | Abnormal intestine morphology |
| HP:0002908 | Conjugated hyperbilirubinemia |
| HP:0003073 | Hypoalbuminemia |
| HP:0003124 | Hypercholesterolemia |
| HP:0003270 | Abdominal distention |
| HP:0003573 | Increased total bilirubin |
| HP:0003593 | Infantile onset |
| HP:0003623 | Neonatal onset |
| HP:0004322 | Short stature |
| HP:0004385 | Protracted diarrhea |
| HP:0004395 | Malnutrition |
| HP:0006580 | Portal fibrosis |
| HP:0011106 | Hypovolemia |
| HP:0011463 | Childhood onset |
| HP:0011472 | Abnormal small intestinal villus morphology |
| HP:0011473 | Villous atrophy |
| HP:0011985 | Acholic stools |
GWAS associations
29 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003997_41 | Myopia | 2.000000e-16 |
| GCST005446_3 | Total cholesterol levels in HDL | 2.000000e-06 |
| GCST005446_4 | Total cholesterol levels in HDL | 2.000000e-06 |
| GCST005455_15 | Mean diameter of HDL particles | 2.000000e-08 |
| GCST005455_16 | Mean diameter of HDL particles | 2.000000e-08 |
| GCST005455_17 | Mean diameter of HDL particles | 3.000000e-08 |
| GCST005497_12 | Large HDL particle concentration | 4.000000e-09 |
| GCST005497_13 | Large HDL particle concentration | 4.000000e-09 |
| GCST005497_14 | Large HDL particle concentration | 1.000000e-08 |
| GCST005499_1 | Phospholipid levels in large HDL | 3.000000e-09 |
| GCST005499_19 | Phospholipid levels in large HDL | 3.000000e-09 |
| GCST005499_2 | Phospholipid levels in large HDL | 1.000000e-08 |
| GCST005503_3 | Medium HDL particle concentration | 1.000000e-08 |
| GCST005503_4 | Medium HDL particle concentration | 1.000000e-08 |
| GCST005504_14 | Phospholipid levels in medium HDL | 3.000000e-08 |
| GCST005504_4 | Phospholipid levels in medium HDL | 2.000000e-08 |
| GCST005504_5 | Phospholipid levels in medium HDL | 2.000000e-08 |
| GCST005513_6 | Apolipoprotein A1 levels | 8.000000e-09 |
| GCST005513_7 | Apolipoprotein A1 levels | 8.000000e-09 |
| GCST005513_8 | Apolipoprotein A1 levels | 4.000000e-08 |
| GCST006186_2 | Systolic blood pressure x smoking status (current vs non-current) interaction (1df test) | 8.000000e-06 |
| GCST006195_92 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 2.000000e-08 |
| GCST006291_35 | Spherical equivalent or myopia (age of diagnosis) | 2.000000e-12 |
| GCST009100_1 | Resistant hypertension | 6.000000e-08 |
| GCST009597_197 | Multiple sclerosis | 3.000000e-06 |
| GCST010002_139 | Refractive error | 4.000000e-60 |
| GCST010241_184 | Apolipoprotein A1 levels | 2.000000e-28 |
| GCST010242_287 | HDL cholesterol levels | 1.000000e-26 |
| GCST012419_8 | Longevity (100 years and older) | 5.000000e-08 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0006335 | systolic blood pressure |
| EFO:0006527 | smoking status measurement |
| EFO:0004847 | age at onset |
| EFO:1002006 | treatment-resistant hypertension |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D005767 | Gastrointestinal Diseases | C06.405 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
49 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, increases methylation | 7 |
| Benzo(a)pyrene | affects methylation, decreases expression, increases methylation | 6 |
| Tobacco Smoke Pollution | affects expression, increases expression, increases methylation | 3 |
| sodium arsenite | increases expression, affects expression | 2 |
| Air Pollutants | increases abundance, increases expression | 2 |
| Calcitriol | increases expression, affects cotreatment | 2 |
| Tretinoin | decreases expression, increases expression | 2 |
| Aflatoxin B1 | decreases expression, increases methylation | 2 |
| GSK-J4 | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| bisphenol A | decreases methylation | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression | 1 |
| trichostatin A | increases expression | 1 |
| beta-lapachone | increases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, decreases expression | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| entinostat | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| abrine | increases expression | 1 |
| Grape Seed Proanthocyanidins | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| bisphenol S | increases methylation | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Panobinostat | affects cotreatment, increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Caffeine | increases phosphorylation | 1 |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_SZ66 | HAP1 MYO5B (-) 1 | Cancer cell line | Male |
| CVCL_XQ82 | HAP1 MYO5B (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
183 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01318928 | PHASE4 | UNKNOWN | The Treatment of Periodontal Diseases |
| NCT02267681 | PHASE4 | COMPLETED | Opioid Effects on Cognitive Function Following Colonoscopy |
| NCT02764671 | PHASE4 | UNKNOWN | Safety and Immunogenicity of Recombinant Hepatitis B Vaccines in the Neonates |
| NCT03646292 | PHASE4 | COMPLETED | Antidiabetic Drugs for Steatotic Liver Disease |
| NCT03723447 | PHASE4 | COMPLETED | Intraoperative TAP Block With Bupivacaine/Dexamethasone Against Liposomal Bupivacaine (Exparel®) |
| NCT06271538 | PHASE4 | RECRUITING | Evaluation of Efficacy of Skål Pro Powder on Symptoms of Irritable Bowel Syndrome |
| NCT03353454 | PHASE3 | WITHDRAWN | A Placebo-controlled Study of Maralixibat (SHP625) in Pediatric Subjects With Progressive Familial Intrahepatic Cholestasis (PFIC) |
| NCT03566238 | PHASE3 | COMPLETED | This Study Will Investigate the Efficacy and Safety of A4250 in Children With PFIC Types 1 or 2 |
| NCT03659916 | PHASE3 | COMPLETED | Long Term Safety & Efficacy Study Evaluating The Effect of A4250 in Children With PFIC |
| NCT03905330 | PHASE3 | COMPLETED | A Study to Evaluate the Efficacy and Safety of Maralixibat in Subjects With Progressive Familial Intrahepatic Cholestasis (MARCH-PFIC) |
| NCT04185363 | PHASE3 | COMPLETED | An Extension Study of Maralixibat in Patients With Progressive Familial Intrahepatic Cholestasis (PFIC) |
| NCT05543187 | PHASE3 | COMPLETED | A Study of TAK-625 for the Treatment of Progressive Familial Intrahepatic Cholestasis (PFIC) |
| NCT01009593 | PHASE3 | TERMINATED | Efficacy and Tolerability of ABT-869 Versus Sorafenib in Advanced Hepatocellular Carcinoma (HCC) |
| NCT01304394 | PHASE3 | COMPLETED | Safety During Use of Paediatric Triple Chamber Bag Formulas |
| NCT01485328 | PHASE3 | COMPLETED | Protocol: Phytomedicine-AMARGOL®, Clinical Trial for Efficacy Proof on Therapeutics |
| NCT01696734 | PHASE3 | RECRUITING | Domperidone in Treating Patients With Gastrointestinal Disorders |
| NCT01964430 | PHASE3 | COMPLETED | Nab-paclitaxel and Gemcitabine vs Gemcitabine Alone as Adjuvant Therapy for Patients With Resected Pancreatic Cancer (the Apact Study) |
| NCT03008460 | PHASE3 | COMPLETED | Efficacy, Safety and Tolerability of Eziclen®/Izinova® Versus Klean-prep® on Bowel Cleansing in Adolescents Undergoing Colonoscopy |
| NCT03509220 | PHASE3 | COMPLETED | Safety and Efficacy of PBK-1701TC for Bowel Cleansing Before Colonoscopy |
| NCT05923918 | PHASE3 | UNKNOWN | A Study to Evaluate Safety and Efficacy of PBK_M2101 |
| NCT06817161 | PHASE3 | RECRUITING | Benefit of Transcutaneous Auricular Vagus Nerve Stimulation in Improving Quality of Life in First Line Treatment of Ovarian Cancer: |
| NCT07076641 | PHASE3 | NOT_YET_RECRUITING | Efficacy and Safety of Intravenous Lidocaine Versus Placebo in Patients Receiving Morphine-rachi Analgesia |
| NCT07114406 | PHASE3 | NOT_YET_RECRUITING | A Study to Evaluate Safety and Efficacy of PBK_M2502 |
| NCT07222800 | PHASE3 | RECRUITING | Symbiotic-GI-03: A Study to Learn About the Study Medicine Called PF-08634404 in Combination With Chemotherapy in Adult Participants With Metastatic Colorectal Cancer |
| NCT01585155 | PHASE3 | COMPLETED | Clinical Study of TA-650 in Pediatric Patients With Ulcerative Colitis |
| NCT06721871 | PHASE2 | RECRUITING | Ascending Doses of Crofelemer Powder for Oral Solution in Pediatric Microvillus Inclusion Disease (MVID) |
| NCT02057718 | PHASE2 | COMPLETED | Open Label Study to Evaluate Efficacy and Long Term Safety of LUM001 (Maralixibat) in the Treatment of Cholestatic Liver Disease in Patients With Progressive Familial Intrahepatic Cholestasis |
| NCT04729751 | PHASE2 | COMPLETED | A Study to Evaluate the Safety and Tolerability of Maralixibat in Infant Participants With Cholestatic Liver Diseases Including Progressive Familial Intrahepatic Cholestasis (PFIC) and Alagille Syndrome (ALGS). |
| NCT00072943 | PHASE2 | COMPLETED | A Humanized Anti-Interferon-γ Monoclonal Antibody (HuZAF) for Moderate to Severe Crohn’s Disease |
| NCT01037049 | PHASE2 | UNKNOWN | Optimum Timing for Surgery After Pre-operative Radiotherapy 6 vs 12 Weeks |
| NCT01695850 | PHASE2 | COMPLETED | A Double-blinded,Double-dummy Clinical Trial of Chinese Herbal Medicine (MaZiRenWan) for Functional Constipation |
| NCT02189707 | PHASE2 | COMPLETED | Effects of Probiotic Supplementation on Colonic Transit Time and Gastrointestinal Symptoms in Adults With Constipation. |
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| NCT02647866 | PHASE2 | COMPLETED | Study of a Monoclonal Antibody KHK4083 in Moderate Ulcerative Colitis |
| NCT03011255 | PHASE2 | UNKNOWN | Combination of Radiation Therapy and Peptide Specific CTL Therapy in Treating Patients With Esophageal Cancer |
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| NCT03559543 | PHASE2 | COMPLETED | Evaluation of Ocoxin®-Viusid® in Metastatic Colorectal Adenocarcinoma |
| NCT03644069 | PHASE2 | UNKNOWN | A Study of the Safety, Efficacy and Tolerability of Nexvax-2 in Patients With Celiac Disease (CeD) |
| NCT03656744 | PHASE2 | COMPLETED | A Study of HTD1801 in Adults With Nonalcoholic Steatohepatitis (NASH) and Type 2 Diabetes Mellitus (T2DM) |
Related Atlas pages
- Associated diseases: microvillus inclusion disease, cholestasis, progressive familial intrahepatic, 10, progressive familial intrahepatic cholestasis type 1, digestive system disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cholestasis, progressive familial intrahepatic, 10, digestive system disorder, inflammatory bowel disease 1, microvillus inclusion disease, progressive familial intrahepatic cholestasis type 1