MYZAP
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Also known as MYOZAPGupGup1GCOM1
Summary
MYZAP (myocardial zonula adherens protein, HGNC:43444) is a protein-coding gene on chromosome 15q21.3, encoding Myocardial zonula adherens protein (P0CAP1). Plays a role in cellular signaling via Rho-related GTP-binding proteins and subsequent activation of transcription factor SRF.
This gene encodes a protein that is abundantly expressed in cardiac tissue. The encoded protein localizes to intercalated discs in cardiomyocytes and functions as an activator of Rho-dependent serum-response factor signaling. Alternative splicing results in multiple transcript variants. Readthrough transcription also exists between this gene and the neighboring downstream gene POLR2M (polymerase (RNA) II (DNA directed) polypeptide M) and is represented with GeneID: 145781.
Source: NCBI Gene 100820829 — RefSeq curated summary.
At a glance
- Gene–disease (curated): cardiomyopathy, dilated, 2K (Strong, GenCC) — +1 more curated relationship
- GWAS associations: 2
- Clinical variants (ClinVar): 162 total — 4 pathogenic, 4 likely-pathogenic
- Phenotypes (HPO): 14
- MANE Select transcript:
NM_001018100
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:43444 |
| Approved symbol | MYZAP |
| Name | myocardial zonula adherens protein |
| Location | 15q21.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MYOZAP, Gup, Gup1, GCOM1 |
| Ensembl gene | ENSG00000263155 |
| Ensembl biotype | protein_coding |
| OMIM | 614071 |
| Entrez | 100820829 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 26 protein_coding
ENST00000267853, ENST00000380565, ENST00000461709, ENST00000569089, ENST00000649429, ENST00000854757, ENST00000854758, ENST00000854759, ENST00000854760, ENST00000854761, ENST00000854762, ENST00000854763, ENST00000854764, ENST00000854765, ENST00000941199, ENST00000941200, ENST00000941201, ENST00000941202, ENST00000941203, ENST00000941204, ENST00000941205, ENST00000941206, ENST00000941207, ENST00000941208, ENST00000941209, ENST00000941210
RefSeq mRNA: 2 — MANE Select: NM_001018100
NM_001018100, NM_152451
CCDS: CCDS10162, CCDS42044
Canonical transcript exons
ENST00000267853 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001893499 | 57591904 | 57592109 |
| ENSE00001927173 | 57684402 | 57685364 |
| ENSE00003458571 | 57621608 | 57621700 |
| ENSE00003459221 | 57625779 | 57625892 |
| ENSE00003477784 | 57637695 | 57637774 |
| ENSE00003554932 | 57629702 | 57629854 |
| ENSE00003556828 | 57674968 | 57675068 |
| ENSE00003597166 | 57604269 | 57604355 |
| ENSE00003653587 | 57661450 | 57661533 |
| ENSE00003654483 | 57633613 | 57633741 |
| ENSE00003656586 | 57618033 | 57618188 |
| ENSE00003672505 | 57632434 | 57632559 |
| ENSE00003687379 | 57639440 | 57639545 |
Expression profiles
Bgee: expression breadth ubiquitous, 227 present calls, max score 99.91.
FANTOM5 (CAGE): breadth broad, TPM avg 2.6548 / max 348.0237, expressed in 427 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 146850 | 2.5501 | 620 |
| 146851 | 2.4549 | 400 |
| 146856 | 0.1654 | 65 |
| 146855 | 0.0218 | 11 |
| 146854 | 0.0127 | 7 |
Top tissues by expression
247 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ventricle myocardium | UBERON:0006566 | 99.91 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.86 | gold quality |
| myocardium | UBERON:0002349 | 99.61 | gold quality |
| apex of heart | UBERON:0002098 | 99.22 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.19 | gold quality |
| cardiac atrium | UBERON:0002081 | 99.00 | gold quality |
| right atrium auricular region | UBERON:0006631 | 98.95 | gold quality |
| cardiac ventricle | UBERON:0002082 | 98.85 | gold quality |
| heart left ventricle | UBERON:0002084 | 98.84 | gold quality |
| pancreatic ductal cell | CL:0002079 | 98.09 | gold quality |
| vena cava | UBERON:0004087 | 97.90 | gold quality |
| right lung | UBERON:0002167 | 95.97 | gold quality |
| heart | UBERON:0000948 | 95.75 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 95.35 | gold quality |
| lower esophagus | UBERON:0013473 | 95.05 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 95.04 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 94.30 | gold quality |
| left adrenal gland | UBERON:0001234 | 94.13 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 93.42 | gold quality |
| right adrenal gland | UBERON:0001233 | 93.38 | gold quality |
| ileal mucosa | UBERON:0000331 | 93.23 | gold quality |
| adrenal cortex | UBERON:0001235 | 93.18 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 93.16 | gold quality |
| adrenal gland | UBERON:0002369 | 92.82 | gold quality |
| esophagus | UBERON:0001043 | 91.89 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 91.49 | gold quality |
| urinary bladder | UBERON:0001255 | 90.88 | gold quality |
| adipose tissue | UBERON:0001013 | 89.98 | gold quality |
| parotid gland | UBERON:0001831 | 89.44 | gold quality |
| esophagus mucosa | UBERON:0002469 | 89.29 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-112 | yes | 10.40 |
| E-ANND-3 | yes | 7.36 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
65 targeting MYZAP, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-3667-3P | 99.99 | 67.17 | 1636 |
| HSA-MIR-7152-3P | 99.97 | 67.47 | 849 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-3910 | 99.95 | 71.13 | 2227 |
| HSA-MIR-3912-5P | 99.95 | 66.11 | 925 |
| HSA-MIR-539-5P | 99.93 | 70.30 | 2855 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-3686 | 99.90 | 70.53 | 2432 |
| HSA-MIR-374B-5P | 99.90 | 69.98 | 2734 |
| HSA-MIR-374A-5P | 99.90 | 71.34 | 2923 |
| HSA-MIR-124-3P | 99.89 | 73.74 | 3043 |
| HSA-MIR-506-3P | 99.89 | 73.55 | 3057 |
| HSA-MIR-3919 | 99.87 | 69.45 | 2489 |
| HSA-MIR-221-5P | 99.86 | 65.45 | 1052 |
| HSA-MIR-8073 | 99.86 | 65.21 | 1118 |
| HSA-MIR-8084 | 99.73 | 69.57 | 1760 |
| HSA-MIR-4719 | 99.73 | 72.10 | 3329 |
| HSA-MIR-3714 | 99.71 | 70.74 | 2671 |
| HSA-MIR-3618 | 99.69 | 68.57 | 1012 |
| HSA-MIR-6892-3P | 99.68 | 66.40 | 1178 |
| HSA-MIR-6733-3P | 99.54 | 67.80 | 1281 |
| HSA-MIR-3609 | 99.52 | 69.89 | 2587 |
| HSA-MIR-548AH-5P | 99.52 | 69.73 | 2626 |
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | myzap | ENSDARG00000075017 |
| mus_musculus | Myzap | ENSMUSG00000041361 |
| rattus_norvegicus | Myzap | ENSRNOG00000071258 |
Paralogs (3): TUFT1 (ENSG00000143367), CCDC68 (ENSG00000166510), POLR2M (ENSG00000255529)
Protein
Protein identifiers
Myocardial zonula adherens protein — P0CAP1 (reviewed: P0CAP1)
Alternative names: GRINL1A upstream protein
All UniProt accessions (3): P0CAP1, H0YCD3, H3BTD5
UniProt curated annotations — full annotation on UniProt →
Function. Plays a role in cellular signaling via Rho-related GTP-binding proteins and subsequent activation of transcription factor SRF. Targets TJP1 to cell junctions. In cortical neurons, may play a role in glutaminergic signal transduction through interaction with the NMDA receptor subunit GRIN1.
Subunit / interactions. Interacts with DSP, MPRIP and TJP1/ZO1. Interaction with MPRIP inhibits the activation of transcription factor SRF. Interacts with GRIN1. Interacts with DYNLL1.
Subcellular location. Cytoplasm. Cytoskeleton. Cell membrane. Myofibril. Sarcomere. I band. Z line. Cell junction.
Tissue specificity. Detected in heart, liver, skeletal muscle, placenta, small intestine, lung, prostate and testis. Expressed in arrector pili muscle (at protein level).
Disease relevance. Cardiomyopathy, dilated, 2K (CMD2K) [MIM:620894] A form of dilated cardiomyopathy, a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. CMD2K is an autosomal recessive form characterized by predominantly left ventricular involvement, although patients with biventricular disease have been observed. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. The adjacent MYZAP and POLR2M genes are part of a complex transcription unit. The respective transcripts derive from different promoters and are alternatively spliced. In human, some transcripts of the upstream promoter of MYZAP use exons of the downstream POLR2M gene. Based on a naturally occurring readthrough transcript which produces a MYZAP-POLR2M fusion protein.
Similarity. Belongs to the MYZAP family.
Isoforms (11)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P0CAP1-1 | 1, Gcom8, Gup1 | yes |
| P0CAP1-2 | 2, Gcom2 | |
| P0CAP1-3 | 3, Gcom13 | |
| P0CAP1-4 | 4, Gcom9, Gup2 | |
| P0CAP1-5 | 5, Gcom10 | |
| P0CAP1-6 | 6, Gcom3 | |
| P0CAP1-7 | 7, Gcom4 | |
| P0CAP1-8 | 8, Gcom5 | |
| P0CAP1-9 | 9, Gcom6 | |
| P0CAP1-10 | 10, Gcom11 | |
| P0CAP1-11 | 11, Gcom1, GRINL1A complex locus protein 1 |
RefSeq proteins (2): NP_001018110, NP_689664 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR051375 | Tuftelin_GRINL1A/MYZAP/CCD68 | Family |
UniProt features (29 total): splice variant 10, sequence variant 7, mutagenesis site 3, coiled-coil region 2, signal peptide 1, chain 1, region of interest 1, sequence conflict 1, strand 1, short sequence motif 1, compositionally biased region 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2KXS | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P0CAP1-F1 | 77.90 | 0.52 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 436 | no effect on dynll1-binding; when associated with g-448. |
| 448 | no effect on dynll1-binding; when associated with g-436. |
| 450 | no effect on dynll1-binding. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 205 (showing top):
GSE45365_NK_CELL_VS_CD8_TCELL_DN, GOCC_RNA_POLYMERASE_COMPLEX, CUI_TCF21_TARGETS_2_DN, CHIARADONNA_NEOPLASTIC_TRANSFORMATION_CDC25_DN, GOCC_I_BAND, GOCC_TRANSFERASE_COMPLEX_TRANSFERRING_PHOSPHORUS_CONTAINING_GROUPS, GOCC_CYTOPLASMIC_SIDE_OF_MEMBRANE, GOCC_TRANSFERASE_COMPLEX, GOCC_SIDE_OF_MEMBRANE, GOCC_ANCHORING_JUNCTION, GOCC_RNA_POLYMERASE_II_CORE_COMPLEX, MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP, DODD_NASOPHARYNGEAL_CARCINOMA_DN, CHEN_METABOLIC_SYNDROM_NETWORK, LIU_PROSTATE_CANCER_DN
GO Biological Process (1): intracellular signal transduction (GO:0035556)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (10): RNA polymerase II, core complex (GO:0005665), cytoplasmic side of plasma membrane (GO:0009898), Z disc (GO:0030018), cortical actin cytoskeleton (GO:0030864), I band (GO:0031674), anchoring junction (GO:0070161), cytoplasm (GO:0005737), cytoskeleton (GO:0005856), plasma membrane (GO:0005886), membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| intracellular anatomical structure | 2 |
| signal transduction | 1 |
| binding | 1 |
| RNA polymerase II, holoenzyme | 1 |
| nuclear DNA-directed RNA polymerase complex | 1 |
| plasma membrane | 1 |
| cytoplasmic side of membrane | 1 |
| I band | 1 |
| actin cytoskeleton | 1 |
| cortical cytoskeleton | 1 |
| sarcomere | 1 |
| cell junction | 1 |
| intracellular membraneless organelle | 1 |
| membrane | 1 |
| cell periphery | 1 |
Protein interactions and networks
STRING
384 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MYZAP | POLR2M | P0CAP2 | 819 |
| MYZAP | STRN | O43815 | 571 |
| MYZAP | PLEC | Q15149 | 551 |
| MYZAP | DSP | P15924 | 459 |
| MYZAP | TJP1 | Q07157 | 439 |
| MYZAP | TCP11L1 | Q9NUJ3 | 430 |
| MYZAP | PKP2 | Q99959 | 414 |
| MYZAP | CTNNB1 | P35222 | 407 |
| MYZAP | RND1 | Q92730 | 388 |
| MYZAP | CXorf49C | A0A1B0GWI6 | 368 |
| MYZAP | BTF3L4 | Q96K17 | 368 |
| MYZAP | SRF | P11831 | 344 |
| MYZAP | CDH1 | P12830 | 339 |
| MYZAP | CRLF3 | Q8IUI8 | 327 |
| MYZAP | CCDC192 | P0DO97 | 322 |
IntAct
73 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| POLR2E | POLR3A | psi-mi:“MI:0914”(association) | 0.870 |
| POLR2G | POLR2D | psi-mi:“MI:0914”(association) | 0.840 |
| POLR2J | POLR1C | psi-mi:“MI:0914”(association) | 0.830 |
| POLR2C | POLR2D | psi-mi:“MI:0914”(association) | 0.730 |
| MED28 | MED19 | psi-mi:“MI:0914”(association) | 0.730 |
| RPRD1B | RECQL5 | psi-mi:“MI:0914”(association) | 0.730 |
| POLR2J | POLR2D | psi-mi:“MI:0914”(association) | 0.730 |
| RPRD1B | POLR2D | psi-mi:“MI:0914”(association) | 0.730 |
| POLR2L | RCCD1 | psi-mi:“MI:0914”(association) | 0.640 |
| POLR2F | POLR3A | psi-mi:“MI:0914”(association) | 0.640 |
| POLR2D | RECQL5 | psi-mi:“MI:0914”(association) | 0.640 |
| POLR2L | POLR3A | psi-mi:“MI:0914”(association) | 0.640 |
| MYZAP | DYNLL1 | psi-mi:“MI:0915”(physical association) | 0.640 |
| DYNLL1 | MYZAP | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| MYZAP | DYNLL1 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| POLR2J | SUPT5H | psi-mi:“MI:0914”(association) | 0.530 |
| CPNE2 | HIP1 | psi-mi:“MI:0914”(association) | 0.530 |
| GPN3 | POLR3A | psi-mi:“MI:0914”(association) | 0.530 |
| PIH1D1 | POLR3A | psi-mi:“MI:0914”(association) | 0.530 |
| ASB6 | POLR2D | psi-mi:“MI:0914”(association) | 0.530 |
| DXO | RECQL5 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (241): GCOM1 (Affinity Capture-RNA), POLR2M (Affinity Capture-MS), POLR2M (Affinity Capture-MS), POLR2M (Affinity Capture-MS), POLR2G (Affinity Capture-MS), RPAP1 (Affinity Capture-MS), RPAP2 (Affinity Capture-MS), USP47 (Affinity Capture-MS), POLR2A (Affinity Capture-MS), POLR2D (Affinity Capture-MS), RPRD1A (Affinity Capture-MS), AMD1 (Affinity Capture-MS), RECQL5 (Affinity Capture-MS), POLR2B (Affinity Capture-MS), INPPL1 (Affinity Capture-MS)
ESM2 similar proteins: A0JMK8, A2AIV8, A3KNA5, A6QR54, A9QT41, B2RZ86, B9V5F5, F7DP49, O88522, P0CAP1, P0CF95, P0DO97, Q08DR9, Q0IHN7, Q0V9T6, Q19UN5, Q3KR99, Q3SWS9, Q3UIJ9, Q4V7C8, Q5BIX7, Q5EB94, Q5HZK9, Q5R923, Q5VZ66, Q6DD09, Q6DIX6, Q6GLX3, Q6NRW2, Q6TMG5, Q6ZU80, Q861Q8, Q8BI22, Q8BT07, Q8BVL9, Q8CIS0, Q8K3K8, Q8R5M4, Q923A2, Q95KA2
Diamond homologs: A9UM82, P0CAP1, Q3UIJ9, Q5EB94
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 72 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| FGFR2 mutant receptor activation | 8 | 132.4× | 4e-14 |
| Signaling by FGFR2 IIIa TM | 8 | 104.5× | 1e-13 |
| Abortive elongation of HIV-1 transcript in the absence of Tat | 9 | 97.2× | 3e-14 |
| RNA Pol II CTD phosphorylation and interaction with CE during HIV infection | 9 | 79.8× | 7e-14 |
| RNA Pol II CTD phosphorylation and interaction with CE | 9 | 79.8× | 7e-14 |
| MicroRNA (miRNA) biogenesis | 8 | 79.4× | 9e-13 |
| Activation of HOX genes during differentiation | 8 | 76.4× | 1e-12 |
| mRNA Capping | 9 | 74.5× | 1e-13 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| transcription by RNA polymerase II | 10 | 10.1× | 2e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
162 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 4 |
| Uncertain significance | 140 |
| Likely benign | 8 |
| Benign | 6 |
Top pathogenic / likely-pathogenic (8)
| Variant ID | HGVS | Classification |
|---|---|---|
| 3252113 | NM_001018100.5(MYZAP):c.388C>T (p.Arg130Ter) | Pathogenic |
| 3252114 | NM_001018100.5(MYZAP):c.933+1G>A | Pathogenic |
| 3252115 | NM_001018100.5(MYZAP):c.1150A>T (p.Lys384Ter) | Pathogenic |
| 3252117 | NM_001018100.5(MYZAP):c.349C>T (p.Arg117Ter) | Pathogenic |
| 4687890 | NM_001018100.5(MYZAP):c.779del (p.His260fs) | Likely pathogenic |
| 4687891 | NM_001018100.5(MYZAP):c.1128dup (p.Leu377fs) | Likely pathogenic |
| 4849368 | NM_001018100.5(MYZAP):c.1258G>T (p.Glu420Ter) | Likely pathogenic |
| 523392 | NM_001018100.5(MYZAP):c.236C>A (p.Ser79Ter) | Likely pathogenic |
SpliceAI
2598 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 15:57592105:GGAGG:G | donor_gain | 1.0000 |
| 15:57592106:GAGG:G | donor_gain | 1.0000 |
| 15:57592106:GAGGG:G | donor_gain | 1.0000 |
| 15:57592107:AGG:A | donor_gain | 1.0000 |
| 15:57592108:GG:G | donor_gain | 1.0000 |
| 15:57592108:GGG:G | donor_gain | 1.0000 |
| 15:57592109:GG:G | donor_gain | 1.0000 |
| 15:57592110:G:GA | donor_loss | 1.0000 |
| 15:57592110:G:GG | donor_gain | 1.0000 |
| 15:57604264:TCTA:T | acceptor_loss | 1.0000 |
| 15:57604265:CTA:C | acceptor_loss | 1.0000 |
| 15:57604266:TA:T | acceptor_loss | 1.0000 |
| 15:57604267:A:AC | acceptor_loss | 1.0000 |
| 15:57604267:A:AG | acceptor_gain | 1.0000 |
| 15:57604267:AG:A | acceptor_gain | 1.0000 |
| 15:57604268:G:A | acceptor_loss | 1.0000 |
| 15:57604268:G:GC | acceptor_gain | 1.0000 |
| 15:57604268:G:GG | acceptor_gain | 1.0000 |
| 15:57604268:GG:G | acceptor_gain | 1.0000 |
| 15:57604268:GGC:G | acceptor_gain | 1.0000 |
| 15:57604268:GGCA:G | acceptor_gain | 1.0000 |
| 15:57604268:GGCAA:G | acceptor_gain | 1.0000 |
| 15:57604352:GCAG:G | donor_gain | 1.0000 |
| 15:57604353:CAG:C | donor_loss | 1.0000 |
| 15:57604354:AGG:A | donor_loss | 1.0000 |
| 15:57604355:GG:G | donor_loss | 1.0000 |
| 15:57604356:GTAAG:G | donor_loss | 1.0000 |
| 15:57604357:T:G | donor_loss | 1.0000 |
| 15:57618031:A:AG | acceptor_gain | 1.0000 |
| 15:57618032:G:GA | acceptor_gain | 1.0000 |
AlphaMissense
3065 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 15:57639493:T:C | L356P | 0.998 |
| 15:57661502:T:C | L391P | 0.998 |
| 15:57639481:G:C | R352P | 0.996 |
| 15:57618144:T:A | W92R | 0.995 |
| 15:57618144:T:C | W92R | 0.995 |
| 15:57637699:G:C | R313P | 0.994 |
| 15:57674978:T:C | L405P | 0.994 |
| 15:57637708:T:C | L316P | 0.993 |
| 15:57633722:T:C | L305P | 0.991 |
| 15:57637720:T:C | L320P | 0.991 |
| 15:57639472:T:C | L349P | 0.991 |
| 15:57618160:T:C | L97P | 0.990 |
| 15:57618146:G:C | W92C | 0.989 |
| 15:57618146:G:T | W92C | 0.989 |
| 15:57633649:G:C | A281P | 0.989 |
| 15:57632452:G:C | A233P | 0.986 |
| 15:57632458:G:C | A235P | 0.986 |
| 15:57633713:T:C | L302P | 0.986 |
| 15:57618091:G:A | G74D | 0.984 |
| 15:57632471:G:C | R239P | 0.984 |
| 15:57618169:A:T | E100V | 0.983 |
| 15:57618085:T:A | V72D | 0.982 |
| 15:57639517:A:C | Q364P | 0.982 |
| 15:57661493:T:A | I388K | 0.982 |
| 15:57621613:A:C | R108S | 0.981 |
| 15:57621613:A:T | R108S | 0.981 |
| 15:57639489:C:G | H355D | 0.981 |
| 15:57621621:T:C | L111S | 0.980 |
| 15:57639475:G:C | R350P | 0.980 |
| 15:57632489:T:C | L245P | 0.979 |
dbSNP variants (sampled 300 via entrez): RS1000032553 (15:57643702 A>G), RS1000038178 (15:57663853 T>C), RS1000072204 (15:57606881 T>C,G), RS1000100693 (15:57626855 G>A), RS1000142281 (15:57640836 C>T), RS1000164108 (15:57592601 G>A,C,T), RS1000195069 (15:57640673 A>G), RS1000217606 (15:57592838 C>T), RS1000269623 (15:57617135 C>T), RS1000283382 (15:57684425 T>C), RS1000346144 (15:57645875 G>A,T), RS1000387656 (15:57658027 G>A), RS1000440548 (15:57652047 T>A), RS1000528062 (15:57607230 C>A), RS1000535451 (15:57591848 C>A,G)
Disease associations
OMIM: gene MIM:614071 | disease phenotypes: MIM:620894
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| cardiomyopathy, dilated, 2K | Strong | Autosomal recessive |
| dilated cardiomyopathy | Moderate | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| cardiomyopathy, dilated, 2K | Moderate | AR |
Mondo (2): cardiomyopathy, dilated, 2K (MONDO:0971175), dilated cardiomyopathy (MONDO:0005021)
Orphanet (1): Dilated cardiomyopathy (Orphanet:217604)
HPO phenotypes
14 total (14 of 14 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001635 | Congestive heart failure |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001685 | Myocardial fibrosis |
| HP:0001962 | Palpitations |
| HP:0002094 | Dyspnea |
| HP:0003621 | Juvenile onset |
| HP:0004756 | Ventricular tachycardia |
| HP:0006682 | Premature ventricular contraction |
| HP:0011462 | Young adult onset |
| HP:0012663 | Mildly reduced left ventricular ejection fraction |
| HP:0012665 | Moderately reduced left ventricular ejection fraction |
| HP:0012666 | Severely reduced left ventricular ejection fraction |
| HP:0031185 | Elevated circulating NT-proBNP concentration |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000974_17 | HDL cholesterol | 7.000000e-07 |
| GCST010573_1 | Cardiorespiratory fitness (800m run time) | 2.000000e-09 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004328 | exercise test |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
15 total (human), top 15 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | increases expression | 2 |
| bisphenol A | affects binding, increases reaction | 1 |
| trichostatin A | affects expression | 1 |
| coumarin | decreases phosphorylation | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment, decreases expression | 1 |
| entinostat | increases expression | 1 |
| dimethylarsinous acid | increases expression | 1 |
| jinfukang | increases expression | 1 |
| Dichlorodiphenyl Dichloroethylene | decreases expression | 1 |
| Lipopolysaccharides | affects response to substance, increases expression, affects cotreatment, decreases expression | 1 |
| Malathion | increases expression | 1 |
| Smoke | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Triclosan | decreases expression | 1 |
| S-Nitrosoglutathione | increases expression | 1 |
Clinical trials (associated diseases)
158 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00374465 | PHASE4 | UNKNOWN | Therapy With Verapamil or Carvedilol in Chronic Heart Failure |
| NCT01293903 | PHASE4 | COMPLETED | Study of Qiliqiangxin Capsule to Treat Dilated Cardiomyopathy |
| NCT01557140 | PHASE4 | COMPLETED | A Randomized Trial of Carvedilol in Chronic Chagas Cardiomyopathy |
| NCT01917149 | PHASE4 | COMPLETED | Supramaximal Titrated Inhibition of RAAS in Dilated Cardiomyopathy |
| NCT02115581 | PHASE4 | COMPLETED | Coenzyme Q10 Supplementation in Children With Idiopathic Dilated Cardiomyopathy |
| NCT06236022 | PHASE4 | RECRUITING | The Effects of Sirolimus in Patients With Dilated Cardiomyopathy Infected With Kaposi Sarcoma-associated Virus |
| NCT00333827 | PHASE3 | COMPLETED | Cell Therapy In Dilated Cardiomyopathy |
| NCT00505154 | PHASE3 | COMPLETED | Effect of Rosuvastatin on Left Ventricular Remodeling |
| NCT01223703 | PHASE3 | COMPLETED | PUFAs and Left Ventricular Function in Heart Failure |
| NCT01583114 | PHASE3 | TERMINATED | PREclinical Mutation CARriers From Families With DIlated Cardiomyopathy and ACE Inhibitors |
| NCT01914081 | PHASE3 | UNKNOWN | Resveratrol: A Potential Anti- Remodeling Agent in Heart Failure, From Bench to Bedside |
| NCT02989181 | PHASE3 | UNKNOWN | Continues Positive Airway Pressure Treatment for Patients With Dilated Cardiomyopathy and Obstructive Sleep Apnea |
| NCT03439514 | PHASE3 | TERMINATED | A Study of ARRY-371797 (PF-07265803) in Patients With Symptomatic Dilated Cardiomyopathy Due to a Lamin A/C Gene Mutation |
| NCT05237323 | PHASE3 | COMPLETED | Micophenolate Mofetil Versus Azathioprine in Myocarditis |
| NCT05849766 | PHASE3 | COMPLETED | Effect of Dapagliflozin on Cardiac Structure, Function and Secondary Mitral Regurgitation in Patients with Left Ventricle Dysfunction |
| NCT06250257 | PHASE3 | RECRUITING | Bromocriptine in Dilated Cardiomyopathy Among Women of Reproductive Age |
| NCT00629018 | PHASE2 | COMPLETED | Safety and Efficacy Study of Stem Cell Transplantation to Treat Dilated Cardiomyopathy |
| NCT00629096 | PHASE2 | COMPLETED | Intracoronary Infusion of Autologous Bone Marrow Cells for Treatment of Idiopathic Dilated Cardiomyopathy |
| NCT00765518 | PHASE2 | COMPLETED | Use of Ixmyelocel-T (Formerly Cardiac Repair Cell [CRC] Treatment) in Patients With Heart Failure Due to Dilated Cardiomyopathy (IMPACT-DCM) |
| NCT00847964 | PHASE2 | COMPLETED | Safety and Feasibility of Algisyl-LVR™ as a Method of Left Ventricular Restoration in Patients With DCM Undergoing Open-heart Surgery |
| NCT01020968 | PHASE2 | COMPLETED | Use of Ixmyelocel-T (Formerly Catheter-based Cardiac Repair Cell [CRC]) Treatment in Patients With Heart Failure Due to Dilated Cardiomyopathy |
| NCT01302171 | PHASE2 | COMPLETED | Bone Marrow Derived Adult Stem Cells for Dilated Cardiomyopathy |
| NCT01350310 | PHASE2 | COMPLETED | Safety and Efficacy Study of Intramyocardial Stem Cell Therapy in Patients With Dilated Cardiomyopathy |
| NCT02133911 | PHASE2 | COMPLETED | A Pilot Trial of Ranolazine to Treat Patients With Dilated Cardiomyopathy |
| NCT03071653 | PHASE2 | SUSPENDED | Left Cardiac Sympathetic Denervation for Cardiomyopathy Feasibility Pilot Study |
| NCT03572660 | PHASE2 | ACTIVE_NOT_RECRUITING | Use of Bone Marrow Derived Stem Cell and G-CSF With Circulatory Assistance in the Treatment of DCM |
| NCT03775070 | PHASE2 | COMPLETED | Simvastatin Therapy in Patients With Dilated Cardiomyopathy. |
| NCT04405804 | PHASE2 | UNKNOWN | Early Administration of Ivabradine in Children With Heart Failure |
| NCT05410873 | PHASE2 | COMPLETED | Examining the Effects of Mitochondrial Oxidative Stress in DCM |
| NCT06632834 | PHASE2 | RECRUITING | Outcome-targeted Therapy: Principle and Outcome Evaluation: Clinical Study and Phenotype-genotype Correlation |
| NCT00585546 | PHASE1 | TERMINATED | Harefield Recovery Protocol Study for Patients With Refractory Chronic Heart Failure |
| NCT02293603 | PHASE1 | UNKNOWN | Dilated cardiomYopathy iNtervention With Allogeneic MyocardIally-regenerative Cells (DYNAMIC) |
| NCT03062956 | PHASE1 | COMPLETED | A Single Ascending Dose Study Assessing the Safety, Tolerability, PK and PD of MYK-491 |
| NCT03129568 | PHASE1 | COMPLETED | Transcoronary Infusion of Cardiac Progenitor Cells in Pediatric Dilated Cardiomyopathy |
| NCT04982081 | PHASE1 | UNKNOWN | Treating Congestive HF With hiPSC-CMs Through Endocardial Injection |
| NCT06381466 | PHASE1 | TERMINATED | A Study to Investigate Safety, Tolerability, and Pharmacokinetics of Oral AZD0233 Compared With Placebo in Healthy Adult Participants. |
| NCT06464588 | PHASE1 | RECRUITING | A Phase 1 Open-Label Study of the Safety of Intravenous Allogeneic Neonatal Mesenchymal Cells (nMSCs) in Young Adult (1A) and Pediatric (1B) Patients With Dilated Cardiomyopathy (DCM) |
| NCT06902896 | PHASE1 | COMPLETED | Safety and Efficacy of FAP iCDC in End-stage Dilated Cardiomyopathy |
| NCT07137338 | PHASE1 | RECRUITING | A Phase 1 AAV Gene Therapy Trial Evaluating Safety and Preliminary Efficacy of RP-A701 in Subjects With BAG3 Dilated Cardiomyopathy |
| NCT07241104 | PHASE1 | RECRUITING | A Study of AZD4063 in PLN R14del Dilated Cardiomyopathy |
Related Atlas pages
- Associated diseases: dilated cardiomyopathy, cardiomyopathy, dilated, 2K
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cardiomyopathy, dilated, 2K, dilated cardiomyopathy