N4BP2L2-IT2

Summary

N4BP2L2-IT2 (N4BPL2 intronic transcript 2, HGNC:25038) is a long non-coding RNA gene on chromosome 13q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:25038
Approved symbol	N4BP2L2-IT2
Name	N4BPL2 intronic transcript 2
Location	13q13.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	CG030
Ensembl gene	ENSG00000281026
Ensembl biotype	lncRNA
Entrez	116828
RNAcentral	URS000075D7C0 — lncRNA, 4890 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000629393

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000629393 — 1 exons

Exon	Start	End
ENSE00003763508	32504506	32509395

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 83.44.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	83.44	gold quality
corpus callosum	UBERON:0002336	79.27	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.59	gold quality
right lung	UBERON:0002167	77.10	gold quality
skin of abdomen	UBERON:0001416	75.67	gold quality
skin of leg	UBERON:0001511	75.63	gold quality
zone of skin	UBERON:0000014	75.61	gold quality
monocyte	CL:0000576	75.49	gold quality
leukocyte	CL:0000738	74.82	gold quality
colonic epithelium	UBERON:0000397	74.74	gold quality
sural nerve	UBERON:0015488	74.60	gold quality
cerebellar cortex	UBERON:0002129	74.55	gold quality
cerebellar hemisphere	UBERON:0002245	74.55	gold quality
cerebellum	UBERON:0002037	74.30	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.29	gold quality
bone marrow cell	CL:0002092	73.61	silver quality
left ovary	UBERON:0002119	73.39	gold quality
skeletal muscle tissue	UBERON:0001134	73.28	gold quality
right ovary	UBERON:0002118	73.12	gold quality
lower esophagus mucosa	UBERON:0035834	73.12	gold quality
uterine cervix	UBERON:0000002	73.01	gold quality
spleen	UBERON:0002106	72.81	gold quality
ovary	UBERON:0000992	72.66	gold quality
granulocyte	CL:0000094	72.55	gold quality
endocervix	UBERON:0000458	72.12	gold quality
body of uterus	UBERON:0009853	72.04	gold quality
small intestine Peyer’s patch	UBERON:0003454	72.01	gold quality
tibial nerve	UBERON:0001323	71.65	gold quality
ectocervix	UBERON:0012249	71.44	gold quality
myometrium	UBERON:0001296	71.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.