NAGPA-AS1

Summary

NAGPA-AS1 (NAGPA antisense RNA 1, HGNC:44184) is a long non-coding RNA gene on chromosome 16p13.3.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44184
Approved symbol	NAGPA-AS1
Name	NAGPA antisense RNA 1
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Entrez	100507589
RNAcentral	URS000075EA71 — lncRNA, 1237 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000117278 (16:5037556 ATGGCCTGATCT>A), RS1000415918 (16:5038002 A>G,T), RS1000932179 (16:5041041 C>T), RS1001170 (16:5032230 T>A,C,G), RS1001171 (16:5032288 A>G,T), RS1001198259 (16:5038250 A>G), RS1001301936 (16:5037620 C>T), RS1001359459 (16:5038068 C>G,T), RS1001372116 (16:5041994 G>GA), RS1001446732 (16:5040825 T>C), RS1001570994 (16:5037800 C>T), RS1001633389 (16:5033765 C>A,T), RS1001784679 (16:5033977 C>T), RS1002205425 (16:5037331 T>C), RS1002285963 (16:5041089 C>T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

1 total (human), top 1 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Sunitinib	increases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.