NALF1-IT1

Summary

NALF1-IT1 (NALF1 intronic transcript 1, HGNC:41503) is a long non-coding RNA gene on chromosome 13q33.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41503
Approved symbol	NALF1-IT1
Name	NALF1 intronic transcript 1
Location	13q33.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227248
Ensembl biotype	lncRNA
Entrez	100874375
RNAcentral	URS000075E90E — lncRNA, 1807 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000449551

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000449551 — 2 exons

Exon	Start	End
ENSE00001649186	107788342	107789110
ENSE00001794484	107835402	107835451

Expression profiles

Bgee: expression breadth broad, 71 present calls, max score 86.98.

Top tissues by expression

183 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.98	gold quality
colonic epithelium	UBERON:0000397	68.56	gold quality
cortical plate	UBERON:0005343	64.73	gold quality
corpus callosum	UBERON:0002336	58.43	gold quality
monocyte	CL:0000576	56.60	gold quality
calcaneal tendon	UBERON:0003701	55.89	gold quality
adrenal tissue	UBERON:0018303	55.26	gold quality
islet of Langerhans	UBERON:0000006	55.03	gold quality
adrenal gland	UBERON:0002369	53.40	gold quality
left testis	UBERON:0004533	52.28	gold quality
testis	UBERON:0000473	52.24	gold quality
right testis	UBERON:0004534	51.21	gold quality
stomach	UBERON:0000945	49.83	gold quality
skin of leg	UBERON:0001511	49.64	gold quality
prefrontal cortex	UBERON:0000451	49.35	gold quality
left coronary artery	UBERON:0001626	49.24	gold quality
lung	UBERON:0002048	48.31	gold quality
lower lobe of lung	UBERON:0008949	47.46	silver quality
pancreas	UBERON:0001264	47.37	gold quality
endometrium	UBERON:0001295	45.92	gold quality
tendon	UBERON:0000043	45.61	gold quality
primary visual cortex	UBERON:0002436	45.29	gold quality
cerebellar cortex	UBERON:0002129	45.14	silver quality
uterus	UBERON:0000995	45.02	gold quality
kidney	UBERON:0002113	44.97	gold quality
small intestine	UBERON:0002108	44.82	silver quality
cerebellar hemisphere	UBERON:0002245	44.72	silver quality
small intestine Peyer’s patch	UBERON:0003454	43.93	gold quality
gastrocnemius	UBERON:0001388	43.80	silver quality
coronary artery	UBERON:0001621	43.76	silver quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-HCAD-30	no	31.84
E-ANND-3	no	1.42

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.