NAPEPLD
gene geneOn this page
Also known as FMP30C7orf18NAPE-PLD
Summary
NAPEPLD (N-acyl phosphatidylethanolamine phospholipase D, HGNC:21683) is a protein-coding gene on chromosome 7q22.1, encoding N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D (Q6IQ20). D-type phospholipase that hydrolyzes N-acyl-phosphatidylethanolamines (NAPEs) to produce bioactive N-acylethanolamines/fatty acid ethanolamides (NAEs/FAEs) and phosphatidic acid.
NAPEPLD is a phospholipase D type enzyme that catalyzes the release of N-acylethanolamine (NAE) from N-acyl-phosphatidylethanolamine (NAPE) in the second step of the biosynthesis of N-acylethanolamine (Okamoto et al., 2004 [PubMed 14634025]).
Source: NCBI Gene 222236 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 78 total — 1 pathogenic
- GTEx eGene: eQTL in 39 tissues, sQTL in 5 (q < 0.05)
- ChEMBL bioactivity: 1 clinical-phase molecule tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.80 (unconstrained)
- MANE Select transcript:
NM_001122838 - Notable: 78 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:21683 |
| Approved symbol | NAPEPLD |
| Name | N-acyl phosphatidylethanolamine phospholipase D |
| Location | 7q22.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FMP30, C7orf18, NAPE-PLD |
| Ensembl gene | ENSG00000161048 |
| Ensembl biotype | protein_coding |
| OMIM | 612334 |
| Entrez | 222236 |
Gene structure
Transcript identifiers
Ensembl transcripts: 27 — 23 protein_coding, 2 retained_intron, 2 nonsense_mediated_decay
MANE Select: ENST00000465647
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 4, TSL 2: 2, TSL 4: 2, TSL 5: 2
ENST00000465647, ENST00000341533, ENST00000414118, ENST00000417955, ENST00000418294, ENST00000420631, ENST00000422589, ENST00000425379, ENST00000427257, ENST00000479761, ENST00000873865, ENST00000873866, ENST00000873867, ENST00000873868, ENST00000873869, ENST00000873870, ENST00000873871, ENST00000873872, ENST00000873873, ENST00000873874, ENST00000873875, ENST00000965816, ENST00000965817, ENST00000965818, ENST00000976742, ENST00001113453, ENST00001139176
RefSeq mRNA: 21 — MANE Select: NM_001122838
NM_001122838, NM_001386176, NM_001386177, NM_001386179, NM_001386182, NM_001386185, NM_001386189, NM_001386190, NM_001386191, NM_001386193, NM_001386194, NM_001386204, NM_001386205, NM_001386207, NM_001386208, NM_001386209, NM_001386210, NM_001386211, NM_001386212, NM_001386213, NM_198990
CCDS: CCDS5729
Canonical transcript exons
ENST00000465647 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001056131 | 103115060 | 103115174 |
| ENSE00001132741 | 103119577 | 103120223 |
| ENSE00001375894 | 103148811 | 103149099 |
| ENSE00003496286 | 103128483 | 103128792 |
| ENSE00004794339 | 103099776 | 103103554 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 95.38.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.3350 / max 172.2434, expressed in 1161 samples.
Highest expression (Bgee): corpus callosum, ventricular zone, superior frontal gyrus, duodenum, primary visual cortex.
Genetic regulation across tissues (GTEx eQTL / sQTL)
NAPEPLD is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 39 tissues and its splicing (sQTL) in 5 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 44 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Cells Cultured fibroblasts | eqtl | 8.8e-39 | +0.65 | 7:103142628:T:C |
| Adipose Subcutaneous | eqtl | 3.5e-28 | +0.57 | 7:103144994:C:T |
| Esophagus Muscularis | eqtl | 5.7e-26 | +0.60 | 7:103149048:A:G |
| Thyroid | eqtl | 2.0e-21 | +0.57 | 7:103155184:C:A |
| Skin Sun Exposed Lower leg | eqtl | 5.0e-19 | +0.37 | 7:103149048:A:G |
| Artery Tibial | eqtl | 1.5e-17 | +0.41 | 7:103149048:A:G |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.7e-15 | +0.36 | 7:103142628:T:C |
| Esophagus Mucosa | eqtl | 2.9e-14 | +0.43 | 7:103241045:G:A |
| Testis | eqtl | 5.5e-14 | +0.89 | 7:103101697:C:T |
| Muscle Skeletal | eqtl | 1.3e-13 | +0.39 | 7:103149048:A:G |
| Colon Sigmoid | eqtl | 6.1e-11 | +0.44 | 7:103241045:G:A |
| Adipose Visceral Omentum | eqtl | 6.8e-10 | -0.37 | 7:103408276:C:G |
| Breast Mammary Tissue | eqtl | 1.1e-09 | +0.39 | 7:103149048:A:G |
| Esophagus Gastroesophageal Junction | eqtl | 4.2e-09 | +0.48 | 7:103149048:A:G |
| Pituitary | eqtl | 9.0e-08 | -0.61 | 7:103351841:G:C |
| Lung | eqtl | 7.8e-07 | +0.34 | 7:103159979:A:G |
| Heart Atrial Appendage | eqtl | 6.1e-06 | +0.33 | 7:103235009:C:G |
| Stomach | eqtl | 6.6e-06 | +0.32 | 7:103141999:A:C |
| Nerve Tibial | eqtl | 1.4e-05 | -0.28 | 7:103371062:G:A |
| Spleen | eqtl | 1.4e-05 | -0.37 | 7:103015625:C:T |
FANTOM5 promoters
5 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 85368 | 2.5003 | 997 |
| 85369 | 0.4008 | 204 |
| 85365 | 0.2102 | 75 |
| 85366 | 0.1545 | 78 |
| 85367 | 0.0691 | 29 |
Top tissues by expression
showing 100 of 134 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| corpus callosum | UBERON:0002336 | 95.38 | gold quality |
| ventricular zone | UBERON:0003053 | 95.36 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 91.93 | gold quality |
| duodenum | UBERON:0002114 | 90.66 | gold quality |
| primary visual cortex | UBERON:0002436 | 90.53 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 90.32 | gold quality |
| prefrontal cortex | UBERON:0000451 | 90.05 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 89.31 | gold quality |
| rectum | UBERON:0001052 | 89.10 | gold quality |
| frontal cortex | UBERON:0001870 | 88.88 | gold quality |
| cerebellar cortex | UBERON:0002129 | 88.65 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 88.63 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 88.59 | gold quality |
| cerebellum | UBERON:0002037 | 88.51 | gold quality |
| cerebral cortex | UBERON:0000956 | 88.28 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 88.22 | gold quality |
| ganglionic eminence | UBERON:0004023 | 87.29 | gold quality |
| metanephros cortex | UBERON:0010533 | 87.25 | gold quality |
| right frontal lobe | UBERON:0002810 | 86.81 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 86.68 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 86.46 | gold quality |
| brain | UBERON:0000955 | 86.19 | gold quality |
| colonic epithelium | UBERON:0000397 | 86.12 | gold quality |
| Ammon’s horn | UBERON:0001954 | 86.05 | gold quality |
| adrenal tissue | UBERON:0018303 | 85.87 | gold quality |
| substantia nigra | UBERON:0002038 | 85.68 | gold quality |
| amygdala | UBERON:0001876 | 85.61 | gold quality |
| kidney | UBERON:0002113 | 85.57 | gold quality |
| temporal lobe | UBERON:0001871 | 85.53 | gold quality |
| endometrium | UBERON:0001295 | 85.51 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 85.43 | gold quality |
| cortex of kidney | UBERON:0001225 | 85.35 | gold quality |
| putamen | UBERON:0001874 | 85.18 | gold quality |
| caudate nucleus | UBERON:0001873 | 85.02 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 84.92 | gold quality |
| right uterine tube | UBERON:0001302 | 84.73 | gold quality |
| transverse colon | UBERON:0001157 | 84.52 | gold quality |
| ovary | UBERON:0000992 | 84.35 | gold quality |
| left ovary | UBERON:0002119 | 83.99 | gold quality |
| right ovary | UBERON:0002118 | 83.79 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 83.77 | gold quality |
| nucleus accumbens | UBERON:0001882 | 83.64 | gold quality |
| right testis | UBERON:0004534 | 83.48 | gold quality |
| testis | UBERON:0000473 | 83.45 | gold quality |
| left testis | UBERON:0004533 | 83.25 | gold quality |
| hypothalamus | UBERON:0001898 | 82.91 | gold quality |
| spleen | UBERON:0002106 | 82.85 | gold quality |
| intestine | UBERON:0000160 | 82.46 | gold quality |
| thyroid gland | UBERON:0002046 | 82.42 | gold quality |
| gall bladder | UBERON:0002110 | 82.33 | gold quality |
| small intestine | UBERON:0002108 | 82.31 | gold quality |
| right lobe of liver | UBERON:0001114 | 82.27 | gold quality |
| colon | UBERON:0001155 | 82.17 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 82.06 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 81.89 | gold quality |
| right coronary artery | UBERON:0001625 | 81.84 | gold quality |
| liver | UBERON:0002107 | 81.78 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 81.66 | gold quality |
| stomach | UBERON:0000945 | 81.64 | gold quality |
| calcaneal tendon | UBERON:0003701 | 81.55 | gold quality |
| thoracic aorta | UBERON:0001515 | 81.37 | gold quality |
| tibial nerve | UBERON:0001323 | 81.25 | gold quality |
| ascending aorta | UBERON:0001496 | 81.22 | gold quality |
| islet of Langerhans | UBERON:0000006 | 80.94 | gold quality |
| fallopian tube | UBERON:0003889 | 80.87 | gold quality |
| body of stomach | UBERON:0001161 | 80.79 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 80.71 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 80.64 | gold quality |
| pancreas | UBERON:0001264 | 80.54 | gold quality |
| adrenal gland | UBERON:0002369 | 80.49 | gold quality |
| muscle tissue | UBERON:0002385 | 80.40 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 80.37 | gold quality |
| popliteal artery | UBERON:0002250 | 80.36 | gold quality |
| right adrenal gland | UBERON:0001233 | 80.35 | gold quality |
| tibial artery | UBERON:0007610 | 80.35 | gold quality |
| body of pancreas | UBERON:0001150 | 80.33 | gold quality |
| fundus of stomach | UBERON:0001160 | 80.18 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 80.12 | gold quality |
| multicellular organism | UBERON:0000468 | 79.89 | gold quality |
| left adrenal gland | UBERON:0001234 | 79.87 | gold quality |
| urinary bladder | UBERON:0001255 | 79.86 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 79.65 | gold quality |
| lymph node | UBERON:0000029 | 79.55 | gold quality |
| left coronary artery | UBERON:0001626 | 79.54 | gold quality |
| cortical plate | UBERON:0005343 | 79.43 | gold quality |
| endocervix | UBERON:0000458 | 78.99 | gold quality |
| vermiform appendix | UBERON:0001154 | 78.83 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 78.62 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 78.33 | gold quality |
| prostate gland | UBERON:0002367 | 78.31 | gold quality |
| muscle of leg | UBERON:0001383 | 78.24 | gold quality |
| body of uterus | UBERON:0009853 | 78.04 | gold quality |
| gastrocnemius | UBERON:0001388 | 78.03 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 77.84 | gold quality |
| uterine cervix | UBERON:0000002 | 77.67 | gold quality |
| myometrium | UBERON:0001296 | 77.61 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 77.41 | gold quality |
| lower esophagus | UBERON:0013473 | 77.40 | gold quality |
| adenohypophysis | UBERON:0002196 | 77.28 | gold quality |
| pituitary gland | UBERON:0000007 | 77.25 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.07 |
| E-GEOD-99795 | no | 175.32 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 80 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Cerebral cortex | tissue | 48.0 | low |
| Somatosensory cortex | tissue | 48.0 | |
| Motor cortex | tissue | 42.5 | |
| Occipital cortex | tissue | 41.7 | |
| Prefrontal cortex | tissue | 36.7 | |
| Corpus callosum | tissue | 36.3 | |
| Retrosplenial and cingulate cortex | tissue | 35.5 | |
| Hippocampal formation | tissue | 34.3 | |
| Entorhinal cortex | tissue | 33.6 | |
| Retrosplenial cortex | tissue | 33.5 | |
| Postcentral gyrus | tissue | 32.1 | |
| Temporal cortex | tissue | 32.0 | |
| Insular cortex | tissue | 30.6 | |
| Putamen | tissue | 29.0 | |
| Midbrain | tissue | 25.8 | |
| Thalamus | tissue | 25.4 | |
| Nucleus accumbens | tissue | 25.3 | |
| Ventral forebrain | tissue | 24.5 | |
| Medulla oblongata | tissue | 24.0 | |
| Superior colliculi | tissue | 22.8 | |
| Substantia nigra | tissue | 22.2 | |
| Pons | tissue | 21.6 | |
| Septum | tissue | 21.6 | |
| Basal ganglia | tissue | 21.3 | not detected |
| Hippocampus | tissue | 21.3 | not detected |
| Amygdala | tissue | 19.2 | |
| Spinal cord | tissue | 19.1 | |
| Periaqueductal gray | tissue | 18.9 | |
| Hypothalamus | tissue | 18.4 | |
| Locus coeruleus | tissue | 17.6 | |
| Kidney | tissue | 13.9 | high |
| Duodenum | tissue | 13.6 | medium |
| Olfactory bulb | tissue | 12.2 | |
| Choroid plexus | tissue | 10.9 | |
| Stomach 1 | tissue | 9.3 | medium |
| Cerebellum | tissue | 9.3 | medium |
| Small intestine | tissue | 9.1 | medium |
| Frontal cortex | tissue | 8.0 | |
| Thyroid gland | tissue | 7.7 | medium |
| Colon | tissue | 7.2 | high |
| Rectum | tissue | 7.0 | medium |
| Liver | tissue | 7.0 | low |
| Ovary | tissue | 6.6 | medium |
| Testis | tissue | 6.3 | medium |
| Spleen | tissue | 6.1 | low |
| Parathyroid gland | tissue | 5.6 | not detected |
| Gallbladder | tissue | 5.5 | medium |
| Fallopian tube | tissue | 5.0 | medium |
| Retina | tissue | 4.5 | |
| Adrenal gland | tissue | 4.4 | medium |
| Prostate | tissue | 4.2 | low |
| Heart muscle | tissue | 3.7 | medium |
| Endometrium 1 | tissue | 3.4 | low |
| Appendix | tissue | 3.4 | low |
| Cervix | tissue | 3.3 | not detected |
| Urinary bladder | tissue | 3.3 | medium |
| Pancreas | tissue | 3.3 | medium |
| Seminal vesicle | tissue | 3.2 | medium |
| Caudate putamen | tissue | 3.2 | |
| Lymph node | tissue | 3.1 | medium |
Brain sub-regions (HPA Brain Atlas): detected in 192; highest nTPM — Parieto-temporal junction (white matter) (44.6), Corpus callosum, genu (white matter) (41.4), Corpus callosum, splenium (white matter) (41.4), Angular gyrus (white matter) (41.0), Occipital cortex (white matter) (41.0).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): IRF6, SP1
miRNA regulators (miRDB)
Targeting NAPEPLD by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 182 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
Functional genomics
gnomAD constraint: pLI 0.000796, LOEUF 0.801, missense Z 1.43 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000465647 — one region, missense o/e 0.86.
Literature-anchored findings (GeneRIF, showing 12)
- The human NAPE-PLD was activated by phosphatidylethanolamine and inhibited by the beta-lactamase substrate nitrocefin. (PMID:19715685)
- During the menstrual cycle, NAPE-PLD immunoreactivity was down-regulated in the secretory epithelial gland compared to the proliferative epithelial gland and unaffected in the stroma. (PMID:20369362)
- a common haplotype in NAPEPLD, an enzyme involved in endocannabinoid synthesis, was protective against obesity. (PMID:20885390)
- The results of this study suggested that NAPEPLD was alterated in multip;e sclerosis. (PMID:21251115)
- NAPE-PLD expression increase steadily after infancy, peaking in adulthood. (PMID:22827915)
- The differential expression of NAPE-PLD and FAAH suggests that Anandamide could play an important role in the pathophysiology of preeclampsia. (PMID:23122699)
- a major physiological role of NAPE-PLD (PMID:24018423)
- our results do not support a clear role of FAAH, CNR1 and NAPE-PLD in BD and lithium response. (PMID:24126189)
- NAPE-PLD forms homodimers partly separated by an internal channel and uniquely adapted to associate with phospholipids. (PMID:25684574)
- The AC genotype and C allele of NAPE-PLD rs12540583 locus are risk factors for schizophrenia. (PMID:29652995)
- Transcriptome analysis revealed that deletion of NAPE-PLD activates a transcriptional program for nutrient transportation, including lipids and lipoproteins, and inactivates cell-cycle or mitosis-related genes in Caco-2 cells. (PMID:30399323)
- NAPE-PLD is target of thiazide diuretics for hypertension. Its internal channel promotes transport of the cofactor PLP across cell membranes. (PMID:39999832)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | napepld | ENSDARG00000009252 |
| mus_musculus | Napepld | ENSMUSG00000044968 |
| rattus_norvegicus | Napepld | ENSRNOG00000011363 |
| caenorhabditis_elegans | WBGENE00021370 | |
| caenorhabditis_elegans | WBGENE00021371 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:2140885) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 2 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| abnormal lipid homeostasis | 1 |
| abnormal brain morphology | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Mycobacterium tuberculosis variant bovis AF2122/97 | P64760 | 100.0% | Diamond |
| Mycobacterium tuberculosis CDC1551 | P9WKP2 | 100.0% | Diamond |
| Mycobacterium tuberculosis H37Rv | P9WKP3 | 100.0% | Diamond |
| Pongo abelii | Q5RCU3 | 98.2% | Diamond |
| Bos taurus | Q58CN9 | 90.5% | Diamond |
| Klebsiella pneumoniae | Q48412 | 46.2% | Diamond |
| Purpureocillium lilacinum | A0A179HLJ8 | 37.3% | Diamond |
| Saccharomyces cerevisiae S288C | Q02883 | 34.6% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| FBXL13 | protein-coding | 222235 |
| NFE4 | ncRNA | 58160 |
| ARMC10 | protein-coding | 83787 |
| DNAJC2 | protein-coding | 27000 |
| PMPCB | protein-coding | 9512 |
| LRRC17 | protein-coding | 10234 |
| FAM185A | protein-coding | 222234 |
| PSMC2 | protein-coding | 5701 |
Protein
Protein identifiers
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D — Q6IQ20 (reviewed: Q6IQ20)
All UniProt accessions (3): Q6IQ20, C9JGB1, H0Y4Y2
UniProt curated annotations — full annotation on UniProt →
Function. D-type phospholipase that hydrolyzes N-acyl-phosphatidylethanolamines (NAPEs) to produce bioactive N-acylethanolamines/fatty acid ethanolamides (NAEs/FAEs) and phosphatidic acid. Cleaves the terminal phosphodiester bond of diacyl- and alkenylacyl-NAPEs, primarily playing a role in the generation of long-chain saturated and monounsaturated NAEs in the brain. May control NAPE homeostasis in dopaminergic neuron membranes and regulate neuron survival, partly through RAC1 activation. As a regulator of lipid metabolism in the adipose tissue, mediates the crosstalk between adipocytes, gut microbiota and immune cells to control body temperature and weight. In particular, regulates energy homeostasis by promoting cold-induced brown or beige adipocyte differentiation program to generate heat from fatty acids and glucose. Has limited D-type phospholipase activity toward N-acyl lyso-NAPEs.
Subunit / interactions. Homodimer. Bile acids promote the assembly of inactive monomers into an active dimer and enable catalysis.
Subcellular location. Golgi apparatus membrane. Early endosome membrane. Nucleus envelope. Nucleus. Nucleoplasm.
Tissue specificity. Widely expressed. Highest expression in brain, kidney and testis (at protein level). Expressed in adipose tissue (at protein level).
Activity regulation. Activated by divalent cations. Activated by bile acids and their conjugates, except for lithocholic acid which is rather inhibitory. Binding of deoxycholic acid favors the selective release of anandamide and likely other unsatured long FAEs. Inhibited by phosphatidylethanolamines.
Cofactor. Binds 2 zinc divalent cations per subunit.
Similarity. Belongs to the NAPE-PLD family.
RefSeq proteins (21): NP_001116310, NP_001373105, NP_001373106, NP_001373108, NP_001373111, NP_001373114, NP_001373118, NP_001373119, NP_001373120, NP_001373122, NP_001373123, NP_001373133, NP_001373134, NP_001373136, NP_001373137, NP_001373138, NP_001373139, NP_001373140, NP_001373141, NP_001373142, NP_945341 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001279 | Metallo-B-lactamas | Domain |
| IPR024884 | NAPE-PLD | Family |
| IPR036866 | RibonucZ/Hydroxyglut_hydro | Homologous_superfamily |
Pfam: PF12706
Enzyme classification (BRENDA)
- EC 3.1.4.54 — N-acetylphosphatidylethanolamine-hydrolysing phospholipase D (BRENDA: 4 organisms, 50 substrates, 156 inhibitors, 35 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
12 substrates with measured Km, best-characterized 12. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| N-PALMITOYL-1,2-DIOLEOYL-PHOSPHATIDYLETHANOLAMIN | 0.002–0.0647 | 15 |
| N-PALMITOYLPHOSPHATIDYLETHANOLAMINE | 0.0017–0.045 | 10 |
| DIFLUORIDO[2-(HEXYLOXY)-3-(PHOSPHONOOXY)PROPYL 5 | 0.004 | 1 |
| DIFLUORIDO[2-(HEXYLOXY)-3-(PHOSPHONOOXY)PROPYL 5 | 0.003 | 1 |
| FLAME-NAPE | 0.0092 | 1 |
| N-ARACHIDONOYL-1,2-DIOLEOYLPHOSPHATIDYLETHANOLAM | 0.0028 | 1 |
| N-ARACHIDONOYL-1-OLEOYL-2-LYSOPHOSPHATIDYLETHANO | 0.004 | 1 |
| N-ARACHIDONOYLPHOSPHATIDYLETHANOLAMINE | 0.04 | 1 |
| N-OLEOYL-1,2-DIOLEOYLPHOSPHATIDYLETHANOLAMINE | 0.0029 | 1 |
| N-PALMITOYL-1-PALMITOYL-2-LINOLEOYLPHOSPHATIDYLE | 0.0033 | 1 |
| N-PALMITOYL-1-PALMITOYL-2-LYSOPHOSPHATIDYLETHANO | 0.004 | 1 |
| N-STEAROYL-1,2-DIOLEOYLPHOSPHATIDYLETHANOLAMINE | 0.0034 | 1 |
Catalyzed reactions (Rhea)
- an N-acyl-1,2-diacyl-sn-glycero-3-phosphoethanolamine + H2O = an N-acylethanolamine + a 1,2-diacyl-sn-glycero-3-phosphate + H(+) (RHEA:33159)
- N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45528)
- N,1,2-tri-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(9Z-octadecenoyl) ethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45532)
- N-octadecanoyl-1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-octadecanoyl ethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45536)
- N-hexadecanoyl-1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-hexadecanoylethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45540)
- N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45544)
- N-tetradecanoyl-1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-tetradecanoylethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45552)
- N-dodecanoyl-1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-dodecanoylethanolamine + 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45556)
- N,1-dihexadecanoyl-sn-glycero-3-phosphoethanolamine + H2O = N-hexadecanoylethanolamine + 1-hexadecanoyl-sn-glycero-3-phosphate + H(+) (RHEA:45592)
- N,1-dihexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphoethanolamine + H2O = 1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphate + N-hexadecanoylethanolamine + H(+) (RHEA:45596)
- N-decanoyl-1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-decanoyl ethanolamine + 1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45608)
- N-octanoyl-1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-octanoyl ethanolamine + 1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphate + H(+) (RHEA:45612)
UniProt features (59 total): strand 20, binding site 13, helix 9, mutagenesis site 5, turn 4, sequence variant 2, sequence conflict 2, chain 1, region of interest 1, modified residue 1, compositionally biased region 1
Structure
Experimental structures (PDB)
4 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 4QN9 | Structure of human NAPE-PLD | X-RAY DIFFRACTION | 2.65 |
| 8P90 | TARGET COMPLEX 2 | X-RAY DIFFRACTION | 2.8 |
| 8PC4 | MEMBRANE TARGET COMPLEX 1 | X-RAY DIFFRACTION | 2.85 |
| 8P96 | TARGET COMPLEX 3 | X-RAY DIFFRACTION | 2.86 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6IQ20-F1 | 87.36 | 0.78 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Hydrolases, Predicted intracellular proteins
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): cytosol
Antibody reliability (HPA): IH approved · IF uncertain
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (13)
| Position | Role |
|---|---|
| 260 | deoxycholate |
| 284 | Zn(2+) |
| 321 | an N-acyl-1,2-diacyl-sn-glycero-3-phosphoethanolamine |
| 343 | Zn(2+) |
| 348 | deoxycholate |
| 185 | Zn(2+) |
| 187 | Zn(2+) |
| 188 | an N-acyl-1,2-diacyl-sn-glycero-3-phosphoethanolamine |
| 189 | Zn(2+) |
| 190 | Zn(2+) |
| 253 | Zn(2+) |
| 256 | deoxycholate |
Post-translational modifications (1)
| Type | Positions |
|---|---|
| N-acetylmethionine | 1 |
Mutagenesis-validated functional residues (5)
| Position | Phenotype |
|---|---|
| 158 | impairs homodimerization resulting in loss of activity; when associated with s-159. |
| 159 | impairs homodimerization resulting in loss of activity; when associated with s-158. |
| 207 | loss of activity. |
| 257 | impairs binding to bile acids resulting in loss of activity. |
| 380 | loss of activity. |
Function
Pathways and Gene Ontology
Reactome pathways
1 curated (TAS) of 5; 5 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
5 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-2466712 | Biosynthesis of A2E, implicated in retinal degradation ⚕ | curated |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-2474795 | Diseases associated with visual transduction ⚕ | — |
| R-HSA-9675143 | Diseases of the neuronal system ⚕ | — |
| R-HSA-2453864 | Retinoid cycle disease events ⚕ | — |
MSigDB gene sets: 228 (showing top):
SHEPARD_BMYB_MORPHOLINO_UP, GOBP_RESPONSE_TO_ETHANOL, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOBP_BEHAVIOR, GOBP_INFLAMMATORY_RESPONSE, GCANCTGNY_MYOD_Q6, GOBP_POSITIVE_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOBP_MODULATION_OF_PROCESS_OF_ANOTHER_ORGANISM, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_REGULATION_OF_BROWN_FAT_CELL_DIFFERENTIATION, CAGCTG_AP4_Q5, YY1_Q6, GOBP_GLYCEROLIPID_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_RESPONSE_TO_EXTERNAL_STIMULUS
GO Biological Process (13): temperature homeostasis (GO:0001659), phospholipid catabolic process (GO:0009395), response to isolation stress (GO:0035900), response to ethanol (GO:0045471), host-mediated modulation of intestinal microbiota composition (GO:0048874), positive regulation of inflammatory response (GO:0050729), N-acylethanolamine metabolic process (GO:0070291), N-acylphosphatidylethanolamine metabolic process (GO:0070292), positive regulation of brown fat cell differentiation (GO:0090336), negative regulation of eating behavior (GO:1903999), lipid metabolic process (GO:0006629), phospholipid metabolic process (GO:0006644), lipid catabolic process (GO:0016042)
GO Molecular Function (7): zinc ion binding (GO:0008270), bile acid binding (GO:0032052), identical protein binding (GO:0042802), N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290), glycerophospholipase activity (GO:0004620), hydrolase activity (GO:0016787), metal ion binding (GO:0046872)
GO Cellular Component (16): Golgi membrane (GO:0000139), nuclear envelope (GO:0005635), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), early endosome (GO:0005769), Golgi apparatus (GO:0005794), smooth endoplasmic reticulum membrane (GO:0030868), early endosome membrane (GO:0031901), photoreceptor outer segment membrane (GO:0042622), presynaptic membrane (GO:0042734), neuron projection (GO:0043005), neuronal cell body (GO:0043025), postsynaptic membrane (GO:0045211), extracellular exosome (GO:0070062), hippocampal mossy fiber to CA3 synapse (GO:0098686), presynapse (GO:0098793)
Reactome top-level categories
4 top-level categories:
| Category | Pathways |
|---|---|
| Retinoid cycle disease events | 1 |
| Diseases associated with visual transduction | 1 |
| Diseases of the neuronal system | 1 |
| Disease | 1 |
GO top-level categories
59 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| lipid metabolic process | 2 |
| bounding membrane of organelle | 2 |
| endomembrane system | 2 |
| synaptic membrane | 2 |
| multicellular organismal-level homeostasis | 1 |
| phospholipid metabolic process | 1 |
| lipid catabolic process | 1 |
| organophosphate catabolic process | 1 |
| multicellular organismal response to stress | 1 |
| response to alcohol | 1 |
| homeostasis of number of cells | 1 |
| host-mediated perturbation of symbiont process | 1 |
| inflammatory response | 1 |
| positive regulation of defense response | 1 |
| positive regulation of response to external stimulus | 1 |
| regulation of inflammatory response | 1 |
| primary alcohol metabolic process | 1 |
| phosphatidylethanolamine metabolic process | 1 |
| positive regulation of fat cell differentiation | 1 |
| brown fat cell differentiation | 1 |
| regulation of brown fat cell differentiation | 1 |
| eating behavior | 1 |
| regulation of eating behavior | 1 |
| negative regulation of feeding behavior | 1 |
| primary metabolic process | 1 |
| organophosphate metabolic process | 1 |
| catabolic process | 1 |
| transition metal ion binding | 1 |
| monocarboxylic acid binding | 1 |
| protein binding | 1 |
| D-type glycerophospholipase activity | 1 |
| phospholipase activity | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| Golgi apparatus | 1 |
| nucleus | 1 |
| organelle envelope | 1 |
| nuclear lumen | 1 |
| intracellular anatomical structure | 1 |
| endosome | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| endoplasmic reticulum membrane | 1 |
| smooth endoplasmic reticulum | 1 |
| early endosome | 1 |
| endosome membrane | 1 |
| photoreceptor outer segment | 1 |
| ciliary membrane | 1 |
| presynapse | 1 |
| plasma membrane bounded cell projection | 1 |
| somatodendritic compartment | 1 |
| cell body | 1 |
| postsynapse | 1 |
| extracellular vesicle | 1 |
| thorny excrescence | 1 |
| neuron to neuron synapse | 1 |
| hippocampal mossy fiber expansion | 1 |
| synapse | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 7 of 36 annotations. The rest are phylogenetic / computational / electronic (IEA).
7 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| N-acylphosphatidylethanolamine metabolic process | BP | direct assay |
| Golgi apparatus | CC | direct assay |
| extracellular exosome | CC | high-throughput assay |
| N-acylphosphatidylethanolamine-specific phospholipase D activity | MF | direct assay |
| bile acid binding | MF | direct assay |
| identical protein binding | MF | physical interaction |
| zinc ion binding | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 682 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| NAPEPLD | FAAH | O00519 | 923 |
| NAPEPLD | PLD2 | O14939 | 910 |
| NAPEPLD | MGLL | Q99685 | 907 |
| NAPEPLD | DAGLB | Q8NCG7 | 905 |
| NAPEPLD | DAGLA | Q9Y4D2 | 891 |
| NAPEPLD | GDE1 | Q9NZC3 | 848 |
| NAPEPLD | ABHD4 | Q8TB40 | 833 |
| NAPEPLD | ABHD6 | Q9BV23 | 823 |
| NAPEPLD | NAAA | Q02083 | 808 |
| NAPEPLD | ABHD12 | Q8N2K0 | 781 |
| NAPEPLD | CNR1 | P21554 | 773 |
| NAPEPLD | FAAH2 | Q6GMR7 | 771 |
| NAPEPLD | GPR55 | Q9Y2T6 | 771 |
| NAPEPLD | TRPV1 | Q8NER1 | 731 |
| NAPEPLD | GPR119 | Q8TDV5 | 704 |
IntAct
Human interaction partners of NAPEPLD in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
1 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| DISC1 | physical association | 0.000 | 1 |
BioGRID (5 interactions; top human partners by supporting records): CLEC4M (Affinity Capture-MS), DDX39A (Affinity Capture-RNA), LMBRD1 (Cross-Linking-MS (XL-MS)), NUDT21 (Affinity Capture-RNA), PPP1CC (Two-hybrid)
Disease & clinical
Genetic variants
Variant evidence for NAPEPLD: 78 ClinVar records (1 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
78 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 58 |
| Likely benign | 2 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 4070958 | NM_001122838.3(NAPEPLD):c.945G>T (p.Trp315Cys) | Pathogenic | no assertion criteria provided | 1 |
Per-variant reference — Sugi Variant
Explore NAPEPLD’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 21 predictions of 1,030):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 7:103128597 | donor_gain | 1.0000 | |
| 7:103148054 | donor_gain | 1.0000 | |
| 7:103103459 | donor_gain | 0.9900 | |
| 7:103103561 | acceptor_gain | 0.9900 | |
| 7:103117683 | donor_gain | 0.9900 | |
| 7:103120228–103120232 | acceptor_gain | 0.9900 | 3 |
| 7:103128793–103128794 | acceptor_loss | 0.9900 | 6 |
| 7:103148886 | donor_gain | 0.9900 | |
| 7:103103560 | acceptor_gain | 0.9800 | |
| 7:103119575–103119576 | donor_loss | 0.9800 | 5 |
AlphaMissense
913 missense substitutions predicted likely pathogenic (of 2,628 scored), across 223 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D189 | 8 | 0.980 | 0.990 |
| H190 | 8 | 0.980 | 0.992 |
| D147 | 8 | 0.976 | 0.992 |
| H185 | 8 | 0.974 | 0.984 |
| H253 | 8 | 0.972 | 0.987 |
| D284 | 8 | 0.971 | 0.995 |
| H187 | 8 | 0.968 | 0.982 |
| H321 | 8 | 0.965 | 0.983 |
| H343 | 8 | 0.956 | 0.988 |
| D192 | 8 | 0.943 | 0.981 |
| H132 | 8 | 0.934 | 0.973 |
| W232 | 7 | 0.988 | 0.998 |
| W209 | 7 | 0.987 | 0.999 |
| W267 | 7 | 0.982 | 0.998 |
| F347 | 7 | 0.970 | 0.993 |
| W129 | 7 | 0.967 | 0.995 |
| F65 | 7 | 0.965 | 0.990 |
| W270 | 7 | 0.965 | 0.998 |
| W233 | 7 | 0.959 | 0.996 |
| S184 | 7 | 0.956 | 0.999 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
3 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 3.35e-08 |
| Pancreatic Adenocarcinoma (TCGA) | unfavorable | 7.56e-05 |
| Rectum Adenocarcinoma (TCGA) | favorable | 0.000954 |
Disease associations
OMIM: gene MIM:612334 | disease phenotypes: MIM:143890
GenCC curated gene-disease
Mondo (1): hypercholesterolemia, familial, 1 (MONDO:0007750)
Orphanet (1): Homozygous familial hypercholesterolemia (Orphanet:391665)
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4630839 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 26,440 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
1 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL496 | HEXACHLOROPHENE | 4 | 26,440 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — N-Acylethanolamine turnover
Most potent curated ligand interactions (8 total), top 8:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| LEI-401 | Inhibition | 7.57 | pKi |
| N3SA | Binding | 7.48 | pKd |
| indapamide | Binding | 6.24 | pKd |
| chlorthalidone | Binding | 6.17 | pKd |
| hydrochlorothiazide | Binding | 5.1 | pKd |
| hexachlorophene | Inhibition | 5.01 | pIC50 |
| bithionol | Inhibition | 4.97 | pIC50 |
| ARN19874 | Inhibition | 4.47 | pIC50 |
Binding affinities (BindingDB)
105 measured of 113 human assays (113 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| CHEMBL4794048 | IC50 | 72 nM |
| CHEMBL4761882 | IC50 | 110 nM |
| CHEMBL4782800 | IC50 | 112 nM |
| CHEMBL4752937 | IC50 | 155 nM |
| CHEMBL4754918 | IC50 | 209 nM |
| CHEMBL4751223 | IC50 | 224 nM |
| CHEMBL4783103 | IC50 | 224 nM |
| CHEMBL4759968 | IC50 | 234 nM |
| CHEMBL4760293 | IC50 | 251 nM |
| CHEMBL4752023 | IC50 | 282 nM |
| CHEMBL4747615 | IC50 | 288 nM |
| CHEMBL4764910 | IC50 | 302 nM |
| CHEMBL4750592 | IC50 | 324 nM |
| CHEMBL4760794 | IC50 | 380 nM |
| CHEMBL4752088 | IC50 | 380 nM |
| CHEMBL4746912 | IC50 | 389 nM |
| CHEMBL4750134 | IC50 | 407 nM |
| CHEMBL4795010 | IC50 | 427 nM |
| CHEMBL4764783 | IC50 | 490 nM |
| CHEMBL4787774 | IC50 | 501 nM |
| CHEMBL4743071 | IC50 | 525 nM |
| CHEMBL4750396 | IC50 | 603 nM |
| CHEMBL4756143 | IC50 | 646 nM |
| CHEMBL4741598 | IC50 | 646 nM |
| CHEMBL4792394 | IC50 | 708 nM |
| CHEMBL4764562 | IC50 | 741 nM |
| CHEMBL4787757 | IC50 | 741 nM |
| CHEMBL4795013 | IC50 | 776 nM |
| CHEMBL4790197 | IC50 | 813 nM |
| CHEMBL4747267 | IC50 | 832 nM |
| CHEMBL4762577 | IC50 | 851 nM |
| CHEMBL4789858 | IC50 | 891 nM |
| CHEMBL4795197 | IC50 | 912 nM |
| CHEMBL4745098 | IC50 | 977 nM |
| CHEMBL4764089 | IC50 | 1000 nM |
| CHEMBL4777828 | IC50 | 1000 nM |
| CHEMBL4750056 | IC50 | 1070 nM |
| CHEMBL4764340 | IC50 | 1100 nM |
| CHEMBL4756683 | IC50 | 1100 nM |
| CHEMBL4751965 | IC50 | 1120 nM |
| CHEMBL4779869 | IC50 | 1180 nM |
| CHEMBL4776045 | IC50 | 1200 nM |
| CHEMBL4757430 | IC50 | 1200 nM |
| CHEMBL4786525 | IC50 | 1230 nM |
| SMR000058356 | IC50 | 1300 nM |
| CHEMBL4749127 | IC50 | 1410 nM |
| CHEMBL4762175 | IC50 | 1440 nM |
| CHEMBL4740570 | IC50 | 1580 nM |
| CHEMBL4740363 | IC50 | 1660 nM |
| CHEMBL4755036 | IC50 | 1820 nM |
ChEMBL bioactivities
82 potent at pChembl≥5 of 106 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.14 | IC50 | 72.44 | nM | CHEMBL4794048 |
| 6.96 | IC50 | 109.7 | nM | CHEMBL4761882 |
| 6.95 | IC50 | 112.2 | nM | CHEMBL4782800 |
| 6.81 | IC50 | 154.9 | nM | CHEMBL4752937 |
| 6.68 | IC50 | 208.9 | nM | CHEMBL4754918 |
| 6.65 | IC50 | 223.9 | nM | CHEMBL4751223 |
| 6.65 | IC50 | 223.9 | nM | CHEMBL4783103 |
| 6.63 | IC50 | 234.4 | nM | CHEMBL4759968 |
| 6.60 | IC50 | 251.2 | nM | CHEMBL4760293 |
| 6.55 | IC50 | 281.8 | nM | CHEMBL4752023 |
| 6.54 | IC50 | 288.4 | nM | CHEMBL4747615 |
| 6.52 | IC50 | 302 | nM | CHEMBL4764910 |
| 6.49 | IC50 | 323.6 | nM | CHEMBL4750592 |
| 6.42 | IC50 | 380.2 | nM | CHEMBL4760794 |
| 6.42 | IC50 | 380.2 | nM | CHEMBL4752088 |
| 6.41 | IC50 | 389.1 | nM | CHEMBL4746912 |
| 6.39 | IC50 | 407.4 | nM | CHEMBL4750134 |
| 6.37 | IC50 | 426.6 | nM | CHEMBL4795010 |
| 6.31 | IC50 | 489.8 | nM | CHEMBL4764783 |
| 6.30 | IC50 | 501.2 | nM | CHEMBL4787774 |
| 6.28 | IC50 | 524.8 | nM | CHEMBL4743071 |
| 6.22 | IC50 | 602.6 | nM | CHEMBL4750396 |
| 6.19 | IC50 | 645.6 | nM | CHEMBL4756143 |
| 6.19 | IC50 | 645.6 | nM | CHEMBL4741598 |
| 6.15 | IC50 | 708 | nM | CHEMBL4792394 |
| 6.13 | IC50 | 741.3 | nM | CHEMBL4764562 |
| 6.13 | IC50 | 741.3 | nM | CHEMBL4787757 |
| 6.11 | IC50 | 776.2 | nM | CHEMBL4795013 |
| 6.09 | IC50 | 812.8 | nM | CHEMBL4790197 |
| 6.08 | IC50 | 831.8 | nM | CHEMBL4747267 |
| 6.07 | IC50 | 851.1 | nM | CHEMBL4762577 |
| 6.05 | IC50 | 891.2 | nM | CHEMBL4789858 |
| 6.04 | IC50 | 912 | nM | CHEMBL4795197 |
| 6.01 | IC50 | 977.2 | nM | CHEMBL4745098 |
| 6.00 | IC50 | 1000 | nM | CHEMBL4764089 |
| 6.00 | IC50 | 1000 | nM | CHEMBL4777828 |
| 5.97 | IC50 | 1072 | nM | CHEMBL4750056 |
| 5.96 | IC50 | 1096 | nM | CHEMBL4764340 |
| 5.96 | IC50 | 1096 | nM | CHEMBL4756683 |
| 5.95 | IC50 | 1122 | nM | CHEMBL4751965 |
| 5.93 | IC50 | 1175 | nM | CHEMBL4779869 |
| 5.92 | IC50 | 1202 | nM | CHEMBL4776045 |
| 5.92 | IC50 | 1202 | nM | CHEMBL4757430 |
| 5.91 | IC50 | 1230 | nM | CHEMBL4786525 |
| 5.85 | IC50 | 1413 | nM | CHEMBL4749127 |
| 5.84 | IC50 | 1445 | nM | CHEMBL4762175 |
| 5.80 | IC50 | 1585 | nM | CHEMBL4740570 |
| 5.80 | IC50 | 1600 | nM | HEXACHLOROPHENE |
| 5.78 | IC50 | 1660 | nM | CHEMBL4740363 |
| 5.74 | IC50 | 1820 | nM | CHEMBL4755036 |
PubChem BioAssay actives
82 with measured affinity, of 115 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-(cyclopropylmethyl)-6-[(3S)-3-hydroxypyrrolidin-1-yl]-2-[(3S)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.0724 | uM |
| N-(cyclopropylmethyl)-6-[(3R)-3-hydroxypyrrolidin-1-yl]-2-[(3S)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.1096 | uM |
| N-(cyclopropylmethyl)-6-(dimethylamino)-2-[(3S)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.1122 | uM |
| N-(cyclopropylmethyl)-2,6-bis[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.1549 | uM |
| N-(cyclopropylmethyl)-6-morpholin-4-yl-2-[(3S)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2089 | uM |
| N-(cyclopropylmethyl)-6-(3-hydroxypyrrolidin-1-yl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2239 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-pyrrolidin-1-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2239 | uM |
| N-(cyclopropylmethyl)-6-[(3S)-3-hydroxypyrrolidin-1-yl]-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2344 | uM |
| N-(cyclopropylmethyl)-6-[(3S)-3-hydroxypyrrolidin-1-yl]-2-[(3R)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2512 | uM |
| N-(cyclopropylmethyl)-6-morpholin-4-yl-2-[2-phenylethyl(propan-2-yl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2818 | uM |
| N-(cyclopropylmethyl)-6-(dimethylamino)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.2884 | uM |
| N-(cyclopropylmethyl)-6-[(3R)-3-hydroxypyrrolidin-1-yl]-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.3020 | uM |
| N-(cyclopropylmethyl)-6-[(3R)-3-hydroxypyrrolidin-1-yl]-2-[(3R)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.3236 | uM |
| N-(cyclopropylmethyl)-6-morpholin-4-yl-2-(3-phenylpiperidin-1-yl)pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.3802 | uM |
| 2-(2-benzylpyrrolidin-1-yl)-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.3802 | uM |
| N-(cyclopropylmethyl)-6-(3,3-difluoropiperidin-1-yl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.3891 | uM |
| N-(cyclopropylmethyl)-6-(dimethylamino)-2-[(3R)-3-phenylpiperidin-1-yl]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.4074 | uM |
| 6-(azetidin-1-yl)-N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.4266 | uM |
| N-(cyclopropylmethyl)-2-[methyl-[2-(2-phenylphenyl)ethyl]amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.4898 | uM |
| N-(cyclopropylmethyl)-6-(diethylamino)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.5012 | uM |
| 2-[bis(2-phenylethyl)amino]-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.5248 | uM |
| N-(cyclopropylmethyl)-2-[methyl-[2-(2-phenoxyphenyl)ethyl]amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.6026 | uM |
| N-(cyclopropylmethyl)-2-[ethyl(2-phenylethyl)amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.6456 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-piperidin-1-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.6456 | uM |
| N-(cyclopropylmethyl)-6-(3-methoxypyrrolidin-1-yl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.7079 | uM |
| 2-[benzyl(2-phenylethyl)amino]-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.7413 | uM |
| 2-(2-benzylpiperidin-1-yl)-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.7413 | uM |
| N-(cyclopropylmethyl)-2-[2-(2-methoxyphenyl)ethyl-methylamino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.7762 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.8128 | uM |
| methyl 2-[[2-[methyl(2-phenylethyl)amino]-6-morpholin-4-ylpyrimidine-4-carbonyl]amino]acetate | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.8318 | uM |
| N-(cyclopropylmethyl)-6-(methylamino)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.8511 | uM |
| N-(cyclopropylmethyl)-2-[methyl-[2-(2-methylphenyl)ethyl]amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.8912 | uM |
| 2-[methyl(2-phenylethyl)amino]-6-morpholin-4-yl-N-prop-2-ynylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.9120 | uM |
| 2-[2-(2-chlorophenyl)ethyl-methylamino]-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 0.9772 | uM |
| 2-(4-benzyl-3-phenylpiperazin-1-yl)-N-(cyclopropylmethyl)-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.0000 | uM |
| N-(cyclopropylmethyl)-6-[2-hydroxyethyl(methyl)amino]-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.0000 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-thiophen-2-ylethyl)amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.0715 | uM |
| N-(cyclopropylmethyl)-2-[cyclopropyl(2-phenylethyl)amino]-6-morpholin-4-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.0965 | uM |
| 6-[benzyl(methyl)amino]-N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.0965 | uM |
| N-(cyclopropylmethyl)-6-morpholin-4-yl-2-[N-(2-phenylethyl)anilino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.1220 | uM |
| N-(cyclopropylmethyl)-6-(3,3-difluoropyrrolidin-1-yl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.1749 | uM |
| 6-(4-acetylpiperazin-1-yl)-N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.2023 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-pyrazol-1-ylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.2023 | uM |
| N-(cyclopropylmethyl)-6-morpholin-4-yl-2-(2-phenylmorpholin-4-yl)pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.2303 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-(3-phenylpyrrolidin-1-yl)pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.4125 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-morpholin-4-ylpyridine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.4454 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-(4-methylpiperazin-1-yl)pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.5849 | uM |
| 3,4,6-trichloro-2-[(2,3,5-trichloro-6-hydroxyphenyl)methyl]phenol | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.6000 | uM |
| N-(cyclopropylmethyl)-2-[methyl(2-phenylethyl)amino]-6-(2-oxa-6-azaspiro[3.3]heptan-6-yl)pyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.6596 | uM |
| 2-[methyl(2-phenylethyl)amino]-6-morpholin-4-yl-N-propylpyrimidine-4-carboxamide | 1707626: Inhibition of full length human NAPE-PLD expressed in HEK293T cell lysate using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured at 2 mins interval for 1 hr by tecan-plate reader analysis | ic50 | 1.8197 | uM |
CTD chemical–gene interactions
38 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, increases expression | 3 |
| potassium chromate(VI) | decreases expression, affects cotreatment | 2 |
| Dronabinol | affects expression, decreases expression | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| Cadmium Chloride | decreases expression, increases expression | 2 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| cannabichromene | decreases expression, increases expression | 1 |
| trichostatin A | increases expression | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| beta-lapachone | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| chromium hexavalent ion | decreases expression | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| Temozolomide | decreases expression | 1 |
| Zoledronic Acid | increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | decreases expression, increases abundance | 1 |
| Air Pollutants, Occupational | decreases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Cannabidiol | increases expression | 1 |
| Cannabinol | decreases expression | 1 |
| Carbamazepine | affects expression | 1 |
| Diclofenac | affects expression | 1 |
| Gold | decreases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4626925 | Binding | Inhibition of full length human NAPE-PLD expressed in HEK293T cells assessed as enzyme remaining activity at 10 uM using PED6 as substrate preincubated for 30 mins followed by substrate addition and measured for 1 hr at 2 mins relative to c | Structure-Activity Relationship Studies of α-Ketoamides as Inhibitors of the Phospholipase A and Acyltransferase Enzyme Family. — *J Med Chem* |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
28 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT06231459 | Phase 4 | COMPLETED | Expression of Pro- and Anti-inflammatory Cytokines During Anti-PCSK9 in Familial Hypercholesterolemia |
| NCT00000594 | Phase 3 | COMPLETED | NHLBI Type II Coronary Intervention Study |
| NCT00092833 | Phase 3 | TERMINATED | Investigational Drug in Patients With Hypercholesterolemia or in Patients With Sitosterolemia (0653-026)(COMPLETED) |
| NCT00134485 | Phase 3 | COMPLETED | Study To Evaluate The Safety And Efficacy Of Torcetrapib/Atorvastatin In Subjects With Familial Hypercholerolemia |
| NCT00134511 | Phase 3 | COMPLETED | Study To Evaluate The Effect Of Torcetrapib/Atorvastatin In Patients With Genetic High Cholesterol Disorder |
| NCT00136981 | Phase 3 | COMPLETED | Carotid B-Mode Ultrasound Study to Compare Anti-Atherosclerotic Effect of Torcetrpib/Atorvastatin to Atorvastatin Alone. |
| NCT00384293 | Phase 3 | TERMINATED | Carotid IMT (Intima Media Thickening) Study (0524A-041)(TERMINATED) |
| NCT01524289 | Phase 3 | COMPLETED | Study to Assess the Tolerability and Efficacy of Anacetrapib (MK-0859) Co-Administered With Statin in Participants With Heterozygous Familial Hypercholesterolemia (MK-0859-020) |
| NCT00280995 | Phase 2 | COMPLETED | Dose-escalating Safety Study of ISIS 301012 in Homozygous Familial Hypercholesterolemia Subjects on Lipid Lowering Therapy |
| NCT00281008 | Phase 2 | COMPLETED | Study of ISIS 301012 (Mipomersen) in Heterozygous Familial Hypercholesterolemia Subjects on Lipid Lowering Therapy |
| NCT01375751 | Phase 2 | COMPLETED | Reduction of Low-Density Lipoprotein Cholesterol (LDL-C) With PCSK9 Inhibition in Heterozygous Familial Hypercholesterolemia Disorder Study |
| NCT00515307 | Phase 1 | COMPLETED | Bone Marrow Stem Cells as a Source of Allogenic Hepatocyte Transplantation in Homozygous Familial Hypercholesterolemia |
| NCT01583647 | Phase 1 | TERMINATED | A Study of Extended-release (ER) Niacin/Laropiprant in Adolescents With Heterozygous Familial Hypercholesterolemia (MK-0524A-158) |
| NCT00005168 | Not specified | COMPLETED | Hyperapo B and Coronary Heart Disease |
| NCT01753232 | Not specified | COMPLETED | Safety and Efficacy of the DALI LDL-adsorber and MONET Lipoprotein Filter |
| NCT03018678 | Not specified | COMPLETED | Screening Protocol for a Gene Therapy Trial in Subjects With Homozygous Familial Hypercholesterolemia |
| NCT03110432 | Not specified | COMPLETED | Prospective German Very High Cardiovascular Risk Patients Dyslipidemia Treatment Indication Registry |
| NCT03795038 | Not specified | COMPLETED | Comparison of the Plasma Lipoprotein Apheresis Systems DIAMED and MONET vs. the Whole Blood Apheresis System DALI |
| NCT03989167 | Not specified | RECRUITING | Clinical Decision Support for Familial Hypercholesterolemia |
| NCT04073797 | Not specified | UNKNOWN | PET Imaging of Inflammation and Lipid Lowering Study |
| NCT04118348 | Not specified | COMPLETED | Evaluating the Efficacy of Pediatric Lipid Screening Alerts |
| NCT04313270 | Not specified | UNKNOWN | Subclinical Atherosclerosis in Patients With Familial Hypercholesterolemia Treated With Evolocumab® |
| NCT04526457 | Not specified | COMPLETED | Is Family Screening Improved by Genetic Testing of Familial Hypercholesterolemia |
| NCT04656028 | Not specified | ACTIVE_NOT_RECRUITING | Genetic Testing and Motivational Counseling for FH |
| NCT04722068 | Not specified | COMPLETED | Regeneron 1331 Kinetics Sub-Study HoFH |
| NCT04837638 | Not specified | UNKNOWN | Diet Quality and Coronary Artery Calcification in Adults With Heterozygous Familial Hypercholesterolemia |
| NCT06555120 | Not specified | RECRUITING | Screening for Familial Hypercholesterolemia in Children |
| NCT07543731 | Not specified | RECRUITING | A Real-World Study of Long-Term Adherence and Persistence to Inclisiran, Evolocumab, and Alirocumab |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for NAPEPLD across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Targeted by drugs: Bithionol, Chlorthalidone, Hexachlorophene, Hydrochlorothiazide, Indapamide
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): hypercholesterolemia, familial, 1