NCBP2-AS1

Summary

NCBP2-AS1 (NCBP2 antisense RNA 1, HGNC:40392) is a long non-coding RNA gene on chromosome 3q29.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40392
Approved symbol	NCBP2-AS1
Name	NCBP2 antisense RNA 1
Location	3q29
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225578
Ensembl biotype	lncRNA
Entrez	100874001
RNAcentral	URS000032F1F5 — lncRNA, 562 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000447775

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000447775 — 3 exons

Exon	Start	End
ENSE00001621302	196942393	196942534
ENSE00001672843	196940980	196941142
ENSE00001760274	196939877	196940133

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 78.44.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.44	gold quality
sural nerve	UBERON:0015488	72.44	gold quality
hindlimb stylopod muscle	UBERON:0004252	70.28	gold quality
colonic epithelium	UBERON:0000397	69.40	gold quality
stromal cell of endometrium	CL:0002255	68.60	gold quality
cortical plate	UBERON:0005343	67.55	gold quality
endometrium	UBERON:0001295	67.48	gold quality
ventricular zone	UBERON:0003053	66.44	gold quality
bone marrow cell	CL:0002092	65.10	silver quality
granulocyte	CL:0000094	65.09	gold quality
apex of heart	UBERON:0002098	64.56	gold quality
lymph node	UBERON:0000029	63.58	gold quality
skeletal muscle tissue	UBERON:0001134	63.28	gold quality
rectum	UBERON:0001052	62.95	gold quality
vermiform appendix	UBERON:0001154	62.51	gold quality
ganglionic eminence	UBERON:0004023	62.18	gold quality
mucosa of stomach	UBERON:0001199	61.74	gold quality
mucosa of transverse colon	UBERON:0004991	61.42	gold quality
bone marrow	UBERON:0002371	61.23	gold quality
smooth muscle tissue	UBERON:0001135	60.59	gold quality
left adrenal gland cortex	UBERON:0035825	60.36	gold quality
body of stomach	UBERON:0001161	60.20	gold quality
body of pancreas	UBERON:0001150	60.11	gold quality
transverse colon	UBERON:0001157	60.02	gold quality
lower esophagus mucosa	UBERON:0035834	59.98	gold quality
fundus of stomach	UBERON:0001160	59.66	gold quality
urinary bladder	UBERON:0001255	59.57	gold quality
small intestine	UBERON:0002108	59.54	gold quality
small intestine Peyer’s patch	UBERON:0003454	59.52	gold quality
right adrenal gland	UBERON:0001233	59.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.