NCKAP5-AS1

Summary

NCKAP5-AS1 (NCKAP5 antisense RNA 1, HGNC:41246) is a long non-coding RNA gene on chromosome 2q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41246
Approved symbol	NCKAP5-AS1
Name	NCKAP5 antisense RNA 1
Location	2q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233729
Ensembl biotype	lncRNA
Entrez	101928185
RNAcentral	URS0000A7665D — lncRNA, 1725 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000424510

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424510 — 2 exons

Exon	Start	End
ENSE00001611335	132915557	132915651
ENSE00001628713	132929879	132931494

Expression profiles

Bgee: expression breadth broad, 35 present calls, max score 80.21.

Top tissues by expression

148 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	80.21	gold quality
sural nerve	UBERON:0015488	67.69	silver quality
right testis	UBERON:0004534	67.26	gold quality
left testis	UBERON:0004533	67.17	gold quality
testis	UBERON:0000473	65.26	gold quality
calcaneal tendon	UBERON:0003701	54.10	silver quality
corpus callosum	UBERON:0002336	54.00	gold quality
muscle of leg	UBERON:0001383	52.76	gold quality
gastrocnemius	UBERON:0001388	50.63	gold quality
tonsil	UBERON:0002372	50.40	silver quality
uterine cervix	UBERON:0000002	48.68	silver quality
upper leg skin	UBERON:0004262	47.62	silver quality
buccal mucosa cell	CL:0002336	46.74	gold quality
tendon	UBERON:0000043	45.90	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	44.64	silver quality
anatomical system	UBERON:0000467	43.92	gold quality
skin of hip	UBERON:0001554	43.90	silver quality
oviduct epithelium	UBERON:0004804	43.73	silver quality
material anatomical entity	UBERON:0000465	43.72	gold quality
multicellular organism	UBERON:0000468	43.63	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
body of pancreas	UBERON:0001150	42.88	silver quality
gingiva	UBERON:0001828	42.63	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
fallopian tube	UBERON:0003889	42.54	silver quality
cortex of kidney	UBERON:0001225	42.44	gold quality
lung	UBERON:0002048	42.23	silver quality
body of stomach	UBERON:0001161	42.21	silver quality
liver	UBERON:0002107	42.21	gold quality
blood	UBERON:0000178	42.04	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.