NCOA7-AS1

Summary

NCOA7-AS1 (NCOA7 antisense RNA 1, HGNC:40954) is a long non-coding RNA gene on chromosome 6q22.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40954
Approved symbol	NCOA7-AS1
Name	NCOA7 antisense RNA 1
Location	6q22.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232131
Ensembl biotype	lncRNA
Entrez	104355145
RNAcentral	URS00007E4629 — lncRNA, 496 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000429007

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429007 — 3 exons

Exon	Start	End
ENSE00001614081	125802303	125802444
ENSE00001614779	125797856	125798165
ENSE00001677648	125818810	125818858

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 85.17.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0120 / max 1.8965, expressed in 6 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
75410	0.0120	6

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	85.17	gold quality
colonic epithelium	UBERON:0000397	73.42	gold quality
sural nerve	UBERON:0015488	69.20	gold quality
stomach	UBERON:0000945	67.94	gold quality
fundus of stomach	UBERON:0001160	67.84	gold quality
body of stomach	UBERON:0001161	67.57	gold quality
bone marrow cell	CL:0002092	66.89	silver quality
bone marrow	UBERON:0002371	64.45	gold quality
liver	UBERON:0002107	62.74	gold quality
calcaneal tendon	UBERON:0003701	60.42	gold quality
adrenal tissue	UBERON:0018303	60.07	gold quality
lymph node	UBERON:0000029	59.33	gold quality
monocyte	CL:0000576	58.44	gold quality
duodenum	UBERON:0002114	58.38	gold quality
right lobe of liver	UBERON:0001114	57.20	gold quality
blood	UBERON:0000178	55.51	gold quality
islet of Langerhans	UBERON:0000006	55.36	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.14	gold quality
gall bladder	UBERON:0002110	54.95	gold quality
uterine cervix	UBERON:0000002	54.67	gold quality
urinary bladder	UBERON:0001255	54.46	silver quality
kidney	UBERON:0002113	54.38	gold quality
endocervix	UBERON:0000458	54.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.86	gold quality
primary visual cortex	UBERON:0002436	53.78	gold quality
tonsil	UBERON:0002372	53.21	gold quality
adrenal gland	UBERON:0002369	52.88	gold quality
pancreas	UBERON:0001264	52.86	gold quality
adult mammalian kidney	UBERON:0000082	52.85	gold quality
left adrenal gland cortex	UBERON:0035825	52.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.