NDP-AS1

Summary

NDP-AS1 (NDP antisense RNA 1, HGNC:40395) is a long non-coding RNA gene on chromosome Xp11.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40395
Approved symbol	NDP-AS1
Name	NDP antisense RNA 1
Location	Xp11.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236276
Ensembl biotype	lncRNA
Entrez	100873919
RNAcentral	URS0000BC4470 — lncRNA, 845 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000435093, ENST00000671493

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435093 — 5 exons

Exon	Start	End
ENSE00001599594	43954516	43954548
ENSE00001663971	43960785	43960894
ENSE00001692355	43949732	43950080
ENSE00001742224	43969460	43969620
ENSE00001766888	43953319	43953402

Expression profiles

Bgee: expression breadth broad, 67 present calls, max score 66.97.

Top tissues by expression

67 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	66.97	gold quality
ventricular zone	UBERON:0003053	64.96	gold quality
endometrium	UBERON:0001295	62.55	gold quality
sural nerve	UBERON:0015488	58.36	silver quality
right uterine tube	UBERON:0001302	57.83	gold quality
smooth muscle tissue	UBERON:0001135	57.76	gold quality
gastrocnemius	UBERON:0001388	56.49	gold quality
cerebellum	UBERON:0002037	55.08	gold quality
cerebellar cortex	UBERON:0002129	54.91	gold quality
cerebellar hemisphere	UBERON:0002245	54.90	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.70	gold quality
prefrontal cortex	UBERON:0000451	54.32	gold quality
ovary	UBERON:0000992	53.67	gold quality
left ovary	UBERON:0002119	53.30	gold quality
lymph node	UBERON:0000029	52.97	gold quality
right ovary	UBERON:0002118	51.96	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.75	gold quality
placenta	UBERON:0001987	51.67	gold quality
blood	UBERON:0000178	50.91	gold quality
primary visual cortex	UBERON:0002436	50.77	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.56	silver quality
corpus callosum	UBERON:0002336	50.09	gold quality
adrenal gland	UBERON:0002369	49.99	silver quality
fallopian tube	UBERON:0003889	49.82	gold quality
putamen	UBERON:0001874	49.67	gold quality
frontal cortex	UBERON:0001870	49.42	gold quality
brain	UBERON:0000955	49.10	gold quality
amygdala	UBERON:0001876	48.98	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.67	gold quality
caudate nucleus	UBERON:0001873	48.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.