NDST1-AS1

Summary

NDST1-AS1 (NDST1 antisense RNA 1, HGNC:52899) is a long non-coding RNA gene on chromosome 5q33.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52899
Approved symbol	NDST1-AS1
Name	NDST1 antisense RNA 1
Location	5q33.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254333
Ensembl biotype	lncRNA
Entrez	102546298
RNAcentral	URS000075BDFF — lncRNA, 407 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000519040

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000519040 — 3 exons

Exon	Start	End
ENSE00002097045	150485229	150485299
ENSE00004269355	150475517	150475759
ENSE00004269356	150485901	150486187

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 82.63.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3034 / max 5.2685, expressed in 143 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
64248	0.3034	143

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	82.63	gold quality
bone marrow cell	CL:0002092	73.74	gold quality
bone marrow	UBERON:0002371	71.45	gold quality
ventricular zone	UBERON:0003053	70.83	gold quality
ganglionic eminence	UBERON:0004023	68.28	gold quality
skeletal muscle tissue	UBERON:0001134	66.67	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.50	gold quality
lymph node	UBERON:0000029	65.80	gold quality
right lung	UBERON:0002167	64.71	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	64.48	gold quality
calcaneal tendon	UBERON:0003701	64.17	gold quality
thoracic mammary gland	UBERON:0005200	63.17	gold quality
right coronary artery	UBERON:0001625	63.15	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	62.33	gold quality
liver	UBERON:0002107	62.25	gold quality
left ovary	UBERON:0002119	61.52	gold quality
tonsil	UBERON:0002372	61.27	gold quality
prefrontal cortex	UBERON:0000451	61.18	gold quality
primary visual cortex	UBERON:0002436	61.17	gold quality
superior frontal gyrus	UBERON:0002661	61.14	gold quality
ovary	UBERON:0000992	61.10	gold quality
substantia nigra	UBERON:0002038	60.99	gold quality
tibial artery	UBERON:0007610	60.80	gold quality
popliteal artery	UBERON:0002250	60.79	gold quality
thyroid gland	UBERON:0002046	60.72	gold quality
tibial nerve	UBERON:0001323	60.57	gold quality
subcutaneous adipose tissue	UBERON:0002190	60.14	gold quality
right lobe of thyroid gland	UBERON:0001119	60.11	gold quality
left coronary artery	UBERON:0001626	60.06	gold quality
right adrenal gland cortex	UBERON:0035827	59.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.