NETO1-DT

Summary

NETO1-DT (NETO1 divergent transcript, HGNC:55333) is a long non-coding RNA gene on chromosome 18q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55333
Approved symbol	NETO1-DT
Name	NETO1 divergent transcript
Location	18q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263958
Ensembl biotype	lncRNA
Entrez	100505797
RNAcentral	URS0000A77148 — lncRNA, 471 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000578967, ENST00000580564, ENST00000664848, ENST00000687839, ENST00000833644, ENST00000833645, ENST00000833646, ENST00000833647, ENST00000833648, ENST00000833649, ENST00000833650, ENST00000833651, ENST00000833652, ENST00000833653, ENST00000833654, ENST00000833655, ENST00000833656

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000578967 — 3 exons

Exon	Start	End
ENSE00002692004	72880087	72880234
ENSE00004250432	72881190	72881404
ENSE00004250442	72868871	72869140

Expression profiles

Bgee: expression breadth ubiquitous, 148 present calls, max score 87.30.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2546 / max 28.8201, expressed in 124 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
170732	0.2546	124

Top tissues by expression

220 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
anterior cingulate cortex	UBERON:0009835	87.30	gold quality
Brodmann (1909) area 9	UBERON:0013540	86.27	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.94	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	85.57	gold quality
nucleus accumbens	UBERON:0001882	85.53	gold quality
putamen	UBERON:0001874	84.80	gold quality
caudate nucleus	UBERON:0001873	84.78	gold quality
right frontal lobe	UBERON:0002810	84.50	gold quality
amygdala	UBERON:0001876	82.58	gold quality
prefrontal cortex	UBERON:0000451	81.40	gold quality
neocortex	UBERON:0001950	81.36	gold quality
Ammon’s horn	UBERON:0001954	81.27	gold quality
cerebral cortex	UBERON:0000956	81.04	gold quality
frontal cortex	UBERON:0001870	80.04	gold quality
forebrain	UBERON:0001890	78.87	gold quality
primary visual cortex	UBERON:0002436	78.09	gold quality
temporal lobe	UBERON:0001871	76.58	gold quality
Brodmann (1909) area 23	UBERON:0013554	76.26	gold quality
endothelial cell	CL:0000115	75.60	silver quality
brain	UBERON:0000955	75.23	gold quality
hypothalamus	UBERON:0001898	74.16	gold quality
occipital lobe	UBERON:0002021	73.50	gold quality
ganglionic eminence	UBERON:0004023	72.47	gold quality
superior frontal gyrus	UBERON:0002661	71.18	gold quality
Brodmann (1909) area 46	UBERON:0006483	70.33	gold quality
epithelial cell of pancreas	CL:0000083	69.57	gold quality
entorhinal cortex	UBERON:0002728	69.18	gold quality
middle temporal gyrus	UBERON:0002771	68.62	silver quality
sural nerve	UBERON:0015488	67.60	gold quality
postcentral gyrus	UBERON:0002581	67.35	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.