NIPAL3
gene geneOn this page
Also known as DJ462O23.2SLC57A5
Summary
NIPAL3 (NIPA like domain containing 3, HGNC:25233) is a protein-coding gene on chromosome 1p36.11, encoding NIPA-like protein 3 (Q6P499).
Predicted to enable magnesium ion transmembrane transporter activity. Predicted to be involved in magnesium ion transport. Predicted to be active in membrane.
Source: NCBI Gene 57185 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 78 total
- MANE Select transcript:
NM_020448
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:25233 |
| Approved symbol | NIPAL3 |
| Name | NIPA like domain containing 3 |
| Location | 1p36.11 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DJ462O23.2, SLC57A5 |
| Ensembl gene | ENSG00000001461 |
| Ensembl biotype | protein_coding |
| OMIM | 620034 |
| Entrez | 57185 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 16 protein_coding, 2 protein_coding_CDS_not_defined
ENST00000003912, ENST00000339255, ENST00000358028, ENST00000374399, ENST00000432012, ENST00000475663, ENST00000488155, ENST00000869436, ENST00000869437, ENST00000869438, ENST00000869439, ENST00000869440, ENST00000869441, ENST00000869442, ENST00000869443, ENST00000869444, ENST00000869445, ENST00000969634
RefSeq mRNA: 16 — MANE Select: NM_020448
NM_001322854, NM_001322855, NM_001322856, NM_001322857, NM_001322858, NM_001322859, NM_001322860, NM_001322861, NM_001322862, NM_001322863, NM_001322864, NM_001322865, NM_001322866, NM_001322868, NM_001330409, NM_020448
CCDS: CCDS30631, CCDS81280, CCDS81281, CCDS81282
Canonical transcript exons
ENST00000374399 — 12 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001432973 | 24415802 | 24415904 |
| ENSE00001463422 | 24468986 | 24472976 |
| ENSE00001603157 | 24445185 | 24445244 |
| ENSE00001642364 | 24456138 | 24456273 |
| ENSE00001655999 | 24453408 | 24453504 |
| ENSE00001679113 | 24464026 | 24464120 |
| ENSE00001776100 | 24449481 | 24449626 |
| ENSE00003569258 | 24442055 | 24442226 |
| ENSE00003575842 | 24460481 | 24460544 |
| ENSE00003585417 | 24419291 | 24419640 |
| ENSE00003659521 | 24458888 | 24458976 |
| ENSE00003670970 | 24440172 | 24440240 |
Expression profiles
Bgee: expression breadth ubiquitous, 276 present calls, max score 98.85.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 12.5830 / max 229.6578, expressed in 1754 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 1392 | 10.3044 | 1727 |
| 1391 | 0.9002 | 538 |
| 1394 | 0.6933 | 400 |
| 1396 | 0.4165 | 150 |
| 1393 | 0.2685 | 132 |
Top tissues by expression
292 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| inferior vagus X ganglion | UBERON:0005363 | 98.85 | gold quality |
| medial globus pallidus | UBERON:0002477 | 98.21 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 98.14 | gold quality |
| globus pallidus | UBERON:0001875 | 98.12 | gold quality |
| pons | UBERON:0000988 | 98.11 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 98.00 | gold quality |
| ventral tegmental area | UBERON:0002691 | 97.87 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 97.71 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 97.64 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 97.57 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 97.24 | gold quality |
| parietal lobe | UBERON:0001872 | 96.47 | gold quality |
| postcentral gyrus | UBERON:0002581 | 96.34 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 96.28 | gold quality |
| corpus callosum | UBERON:0002336 | 96.19 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 95.48 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 95.34 | gold quality |
| medulla oblongata | UBERON:0001896 | 95.20 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 95.16 | gold quality |
| entorhinal cortex | UBERON:0002728 | 94.92 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 94.74 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 94.65 | gold quality |
| spinal cord | UBERON:0002240 | 94.55 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 94.52 | gold quality |
| cerebellar cortex | UBERON:0002129 | 94.50 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 94.49 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 94.28 | gold quality |
| cerebellum | UBERON:0002037 | 94.15 | gold quality |
| amniotic fluid | UBERON:0000173 | 94.14 | gold quality |
| endothelial cell | CL:0000115 | 93.90 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-7051 | yes | 4020.27 |
| E-ANND-3 | yes | 11.77 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
102 targeting NIPAL3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-432-3P | 100.00 | 67.86 | 705 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-512-3P | 99.97 | 67.35 | 1049 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-141-3P | 99.94 | 72.79 | 2421 |
| HSA-MIR-200A-3P | 99.94 | 72.68 | 2420 |
| HSA-MIR-1236-3P | 99.94 | 68.04 | 1695 |
| HSA-MIR-589-3P | 99.91 | 69.62 | 2088 |
| HSA-MIR-1343-3P | 99.89 | 66.78 | 1815 |
| HSA-MIR-6783-3P | 99.89 | 67.92 | 2059 |
| HSA-MIR-548E-5P | 99.89 | 72.73 | 4486 |
| HSA-MIR-605-3P | 99.88 | 69.22 | 1833 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-3919 | 99.87 | 69.45 | 2489 |
| HSA-MIR-579-3P | 99.86 | 71.66 | 3628 |
| HSA-MIR-664B-3P | 99.84 | 71.65 | 3590 |
| HSA-MIR-544A | 99.84 | 68.66 | 1965 |
| HSA-MIR-6875-3P | 99.82 | 70.26 | 2983 |
| HSA-MIR-3180-5P | 99.82 | 69.12 | 2422 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-378G | 99.71 | 64.90 | 1106 |
Literature-anchored findings (GeneRIF, showing 1)
- Study demonstrates that both human NPAL3 and mouse NPAL3 are ubiquitously expressed and encode highly conserved proteins (PMID:19738379)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | nipal3 | ENSDARG00000021147 |
| mus_musculus | Nipal3 | ENSMUSG00000028803 |
| rattus_norvegicus | Nipal3 | ENSRNOG00000037165 |
| drosophila_melanogaster | spict | FBGN0032451 |
| caenorhabditis_elegans | WBGENE00021820 |
Paralogs (5): NIPAL2 (ENSG00000104361), NIPA2 (ENSG00000140157), NIPAL1 (ENSG00000163293), NIPA1 (ENSG00000170113), NIPAL4 (ENSG00000172548)
Protein
Protein identifiers
NIPA-like protein 3 — Q6P499 (reviewed: Q6P499)
All UniProt accessions (3): A6NN97, Q6P499, H0Y4I9
UniProt curated annotations — full annotation on UniProt →
Subcellular location. Membrane.
Similarity. Belongs to the NIPA family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q6P499-1 | 1 | yes |
| Q6P499-2 | 2 | |
| Q6P499-3 | 3 |
RefSeq proteins (16): NP_001309783, NP_001309784, NP_001309785, NP_001309786, NP_001309787, NP_001309788, NP_001309789, NP_001309790, NP_001309791, NP_001309792, NP_001309793, NP_001309794, NP_001309795, NP_001309797, NP_001317338, NP_065181* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR008521 | Mg_trans_NIPA | Family |
Pfam: PF05653
UniProt features (15 total): transmembrane region 9, splice variant 3, chain 1, modified residue 1, glycosylation site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6P499-F1 | 74.97 | 0.36 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 372
Glycosylation sites (1): 166
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-5223345 | Miscellaneous transport and binding events |
MSigDB gene sets: 177 (showing top):
BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_DN, GOBP_MAGNESIUM_ION_TRANSPORT, GOBP_MONOATOMIC_CATION_TRANSPORT, HERNANDEZ_ABERRANT_MITOSIS_BY_DOCETACEL_2NM_UP, TCF4_Q5, FONTAINE_PAPILLARY_THYROID_CARCINOMA_UP, KOYAMA_SEMA3B_TARGETS_UP, BROWNE_HCMV_INFECTION_14HR_DN, CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5, BROWNE_HCMV_INFECTION_24HR_DN, HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP, DOUGLAS_BMI1_TARGETS_DN, NOUZOVA_METHYLATED_IN_APL, GOBP_TRANSMEMBRANE_TRANSPORT, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN
GO Biological Process (2): magnesium ion transport (GO:0015693), magnesium ion transmembrane transport (GO:1903830)
GO Molecular Function (2): magnesium ion transmembrane transporter activity (GO:0015095), protein binding (GO:0005515)
GO Cellular Component (1): membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Transport of small molecules | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| metal ion transport | 1 |
| magnesium ion transport | 1 |
| monoatomic cation transmembrane transport | 1 |
| metal ion transmembrane transporter activity | 1 |
| magnesium ion transmembrane transport | 1 |
| binding | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
302 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| NIPAL3 | MAGT1 | Q9H0U3 | 789 |
| NIPAL3 | SLC41A1 | Q8IVJ1 | 655 |
| NIPAL3 | PTP4A2 | Q12974 | 640 |
| NIPAL3 | CNNM2 | Q9H8M5 | 619 |
| NIPAL3 | CNNM3 | Q8NE01 | 605 |
| NIPAL3 | CNNM4 | Q6P4Q7 | 584 |
| NIPAL3 | MMGT1 | Q8N4V1 | 575 |
| NIPAL3 | TRPM6 | Q9BX84 | 571 |
| NIPAL3 | FAM131C | Q96AQ9 | 527 |
| NIPAL3 | CNNM1 | Q9NRU3 | 519 |
| NIPAL3 | MRS2 | Q9HD23 | 515 |
| NIPAL3 | SLC41A2 | Q96JW4 | 507 |
| NIPAL3 | SLC41A3 | Q96GZ6 | 498 |
| NIPAL3 | SPRYD7 | Q5W111 | 428 |
| NIPAL3 | MAN1C1 | Q9NR34 | 424 |
IntAct
37 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| EDA | NIPAL3 | psi-mi:“MI:0915”(physical association) | 0.830 |
| NIPAL3 | EDA | psi-mi:“MI:0915”(physical association) | 0.830 |
| NIPAL3 | TMEM14B | psi-mi:“MI:0915”(physical association) | 0.560 |
| NIPAL3 | MFF | psi-mi:“MI:0915”(physical association) | 0.560 |
| CD79A | NIPAL3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NIPAL3 | GPX8 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NIPAL3 | MANBAL | psi-mi:“MI:0915”(physical association) | 0.560 |
| VMA21 | NIPAL3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ATP6V0C | NIPAL3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GJA5 | NIPAL3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NIPAL3 | VPS45 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NIPAL3 | VIM | psi-mi:“MI:0915”(physical association) | 0.400 |
| NIPAL3 | ILVBL | psi-mi:“MI:0914”(association) | 0.350 |
| NIPAL4 | PGRMC2 | psi-mi:“MI:0914”(association) | 0.350 |
| NIPAL3 | EDA | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | MFF | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | MANBAL | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | VMA21 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | CD79A | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | GPX8 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NIPAL3 | ATP6V0C | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (260): NIPAL3 (Two-hybrid), VPS45 (Affinity Capture-MS), NIPAL3 (Two-hybrid), NIPAL3 (Affinity Capture-MS), MANBAL (Two-hybrid), CD79A (Two-hybrid), TMEM14B (Two-hybrid), EDA (Two-hybrid), VMA21 (Two-hybrid), GPX8 (Two-hybrid), MFF (Two-hybrid), ATP6V0C (Two-hybrid), GJA5 (Two-hybrid), NIPAL3 (Proximity Label-MS), NIPAL3 (Proximity Label-MS)
ESM2 similar proteins: A1L272, A6QL92, B8AF63, E2RFJ3, E7EXX2, O35458, O35633, O54902, O80605, P49281, P49282, P51027, P57057, P58355, Q0VA82, Q28CV2, Q569T7, Q5F383, Q5R6J3, Q5RD30, Q5U3U7, Q62052, Q640L2, Q6DEJ6, Q6DIV6, Q6GPQ3, Q6GQE1, Q6P499, Q6PF45, Q6YK44, Q7RTT9, Q8BGN5, Q8BH31, Q8CBH5, Q8MIQ9, Q8NA29, Q8NBI5, Q8NHS3, Q8R070, Q8R139
Diamond homologs: Q5RD30, Q6P499, Q8BGN5, Q91WC7, Q9H841, Q0D2K0, Q3SWX0, Q5R7Q3, Q8GWX2, Q8GYS1, Q8N8Q9, Q9LIR9, B3LFA3, F4JKQ7, Q5RDB8, Q6NVV3, Q94AH3, Q9LNK7
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
78 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 58 |
| Likely benign | 6 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2436 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:24440237:CCAGG:C | donor_loss | 1.0000 |
| 1:24440238:CAGGT:C | donor_loss | 1.0000 |
| 1:24440240:GGTA:G | donor_loss | 1.0000 |
| 1:24440241:G:GG | donor_gain | 1.0000 |
| 1:24442045:G:A | acceptor_gain | 1.0000 |
| 1:24442050:TCTA:T | acceptor_loss | 1.0000 |
| 1:24442051:CTA:C | acceptor_loss | 1.0000 |
| 1:24442053:A:AG | acceptor_gain | 1.0000 |
| 1:24442054:G:GA | acceptor_gain | 1.0000 |
| 1:24442054:GAA:G | acceptor_gain | 1.0000 |
| 1:24442054:GAAGT:G | acceptor_gain | 1.0000 |
| 1:24442223:ATAGG:A | donor_loss | 1.0000 |
| 1:24442224:TAGGT:T | donor_loss | 1.0000 |
| 1:24442225:AGGTA:A | donor_loss | 1.0000 |
| 1:24442226:GGTAA:G | donor_loss | 1.0000 |
| 1:24442227:GTAAG:G | donor_loss | 1.0000 |
| 1:24442228:TAAGA:T | donor_loss | 1.0000 |
| 1:24445183:A:AG | acceptor_gain | 1.0000 |
| 1:24445184:G:GG | acceptor_gain | 1.0000 |
| 1:24445184:GCTA:G | acceptor_gain | 1.0000 |
| 1:24445243:GA:G | donor_gain | 1.0000 |
| 1:24445245:G:GG | donor_gain | 1.0000 |
| 1:24449625:TGGT:T | donor_loss | 1.0000 |
| 1:24449627:GT:G | donor_loss | 1.0000 |
| 1:24449628:T:TC | donor_loss | 1.0000 |
| 1:24453402:CCACA:C | acceptor_loss | 1.0000 |
| 1:24453403:CACA:C | acceptor_loss | 1.0000 |
| 1:24453404:ACAGC:A | acceptor_loss | 1.0000 |
| 1:24453405:CAG:C | acceptor_loss | 1.0000 |
| 1:24453406:A:AG | acceptor_gain | 1.0000 |
AlphaMissense
2666 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:24440220:A:C | S48R | 0.999 |
| 1:24440222:C:A | S48R | 0.999 |
| 1:24440222:C:G | S48R | 0.999 |
| 1:24440185:G:A | G36D | 0.997 |
| 1:24449546:T:C | F154L | 0.997 |
| 1:24449548:C:A | F154L | 0.997 |
| 1:24449548:C:G | F154L | 0.997 |
| 1:24440184:G:C | G36R | 0.996 |
| 1:24440206:G:A | G43E | 0.996 |
| 1:24449525:G:C | G147R | 0.996 |
| 1:24460543:G:T | G309W | 0.996 |
| 1:24440205:G:A | G43R | 0.995 |
| 1:24440205:G:C | G43R | 0.995 |
| 1:24449504:G:C | G140R | 0.995 |
| 1:24449505:G:A | G140D | 0.995 |
| 1:24449526:G:A | G147D | 0.995 |
| 1:24460543:G:A | G309R | 0.995 |
| 1:24460543:G:C | G309R | 0.995 |
| 1:24460544:G:A | G309E | 0.995 |
| 1:24442149:G:A | G86D | 0.994 |
| 1:24442203:C:G | P104R | 0.994 |
| 1:24445187:A:C | S113R | 0.994 |
| 1:24445189:T:A | S113R | 0.994 |
| 1:24445189:T:G | S113R | 0.994 |
| 1:24464045:G:C | G316R | 0.994 |
| 1:24442148:G:C | G86R | 0.993 |
| 1:24458976:G:C | G288R | 0.993 |
| 1:24460534:T:C | F306L | 0.993 |
| 1:24460536:T:A | F306L | 0.993 |
| 1:24460536:T:G | F306L | 0.993 |
dbSNP variants (sampled 300 via entrez): RS1000040109 (1:24464281 C>T), RS1000129929 (1:24437226 T>G), RS1000143615 (1:24438302 C>G), RS1000154445 (1:24459790 T>A), RS1000183572 (1:24437489 C>G,T), RS1000282600 (1:24457125 G>A,C), RS1000343064 (1:24431489 C>T), RS1000353089 (1:24430390 C>T), RS1000404124 (1:24425436 AATC>A), RS1000435680 (1:24436277 G>A), RS1000443118 (1:24467266 A>G), RS1000517476 (1:24412205 G>T), RS1000552928 (1:24419505 C>T), RS1000631451 (1:24432726 A>G), RS1000639511 (1:24441813 A>G)
Disease associations
OMIM: gene MIM:620034 | disease phenotypes:
GenCC curated gene-disease
Mondo (1): neurodevelopmental disorder (MONDO:0700092)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006661_57 | Male-pattern baldness | 4.000000e-09 |
| GCST010302_5 | Cutaneous melanoma or hair colour | 2.000000e-12 |
| GCST010304_47 | Cutaneous malignant melanoma | 8.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003924 | hair color |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — SLC57 NiPA-like magnesium transporter family
CTD chemical–gene interactions
37 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Air Pollutants | decreases expression, affects expression, increases abundance | 3 |
| Valproic Acid | affects expression, increases expression | 3 |
| sodium arsenite | affects methylation, decreases expression | 2 |
| Benzo(a)pyrene | decreases expression, decreases methylation | 2 |
| aristolochic acid I | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | decreases methylation | 1 |
| arsenite | affects binding, increases reaction | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| hydroquinone | decreases expression | 1 |
| avobenzone | increases expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| entinostat | increases expression | 1 |
| abrine | decreases expression | 1 |
| bisphenol S | increases methylation | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Fulvestrant | increases methylation | 1 |
| Cisplatin | affects cotreatment, increases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Lead | affects expression | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Ozone | affects expression, increases abundance | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Silicon Dioxide | decreases expression | 1 |
| Smoke | decreases expression, increases abundance | 1 |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D4ED | 1321N1-NIPAL3-KO-c1 | Cancer cell line | Male |
| CVCL_D4EE | 1321N1-NIPAL3-KO-c3 | Cancer cell line | Male |
Clinical trials (associated diseases)
202 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT01783041 | PHASE2/PHASE3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | PHASE2/PHASE3 | RECRUITING | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | EARLY_PHASE1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
| NCT01922791 | Not specified | COMPLETED | Nutrition and Pregnancy Intervention Study |
| NCT01942525 | Not specified | UNKNOWN | Influence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants |
| NCT02003170 | Not specified | COMPLETED | Etiology and Early Diagnosis of Neurodevelopmental Disorders |
| NCT02118649 | Not specified | ACTIVE_NOT_RECRUITING | Enhancing Behavior and Brain Response to Visual Targets Using a Computer Game |
| NCT02557191 | Not specified | TERMINATED | Biomarkers, Neurodevelopment and Preterm Infants |
| NCT02690675 | Not specified | COMPLETED | Iron Supplement Effect on Child Development |
| NCT02694003 | Not specified | COMPLETED | Better Nights, Better Days for Children With Neurodevelopment Disorders |
| NCT02792894 | Not specified | COMPLETED | Family Networks (FaNs) for Children With Developmental Disorders and Delays |
| NCT02871674 | Not specified | UNKNOWN | Good Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial |
| NCT02887157 | Not specified | COMPLETED | Analyzing Retinal Microanatomy in ROP |
| NCT02898298 | Not specified | COMPLETED | Positive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder |
| NCT02912780 | Not specified | UNKNOWN | Introduction of Microsystems in a Level 3 Neonatal Intensive Care Unit |
| NCT03023293 | Not specified | COMPLETED | n-3 PUFAs, Irisin and Maternal Glucose Metabolism From Pregnancy to Postpartum |
| NCT03023644 | Not specified | COMPLETED | Improving Neurodevelopmental Outcomes in Children With Congenital Heart Disease: An Intervention Study |
| NCT03032991 | Not specified | UNKNOWN | Early Biomarkers of Neurodevelopment in Offspring of Diabetic Mothers |
| NCT03088189 | Not specified | TERMINATED | Effect of Parental Peri-conceptional Vitamin B12 Supplementation on Infant Neurocognitive Development in Offspring |
| NCT03096028 | Not specified | COMPLETED | Developmental Origins of Mental Health Disorders |
| NCT03148782 | Not specified | COMPLETED | Brain Plasticity Underlying Acquisition of New Organizational Skills in Children-R61 Phase |
| NCT03172104 | Not specified | COMPLETED | Neurobehavioural Development of Infants Born <30 Weeks Gestational Age Between Birth and Five Years of Age |
| NCT03222375 | Not specified | RECRUITING | SQUED™ Series 28.1 Home-use and Treatment of Autowave Reverberator of Autism |
| NCT03229928 | Not specified | COMPLETED | Clinical Testing of a Real-Time Behavior Measurement Tool: Measuring Outcomes for CHAnge |
| NCT03232489 | Not specified | UNKNOWN | Study for the Evaluation of the Feasibility of Applying Advanced MRI Scanning in Pediatric Clinical Practice |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.