NONO
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Also known as p54(NRB)NRB54NMT55P54NRBP54PPP1R114
Summary
NONO (non-POU domain containing octamer binding, HGNC:7871) is a protein-coding gene on chromosome Xq13.1, encoding Non-POU domain-containing octamer-binding protein (Q15233). DNA- and RNA binding protein, involved in several nuclear processes. It is a selective cancer dependency (DepMap: 12.5% of cell lines) and haploinsufficient (ClinGen: sufficient evidence).
This gene encodes an RNA-binding protein which plays various roles in the nucleus, including transcriptional regulation and RNA splicing. A rearrangement between this gene and the transcription factor E3 gene has been observed in papillary renal cell carcinoma. Alternatively spliced transcript variants have been described. Pseudogenes exist on Chromosomes 2 and 16.
Source: NCBI Gene 4841 — RefSeq curated summary.
At a glance
- Gene–disease (curated): X-linked syndromic intellectual disability (Definitive, ClinGen) — +2 more curated relationships
- Clinical variants (ClinVar): 258 total — 23 pathogenic, 10 likely-pathogenic
- Phenotypes (HPO): 104
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 12.5% of screened cell lines
- Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
- Transcription factor: yes — 22 downstream targets (CollecTRI)
- MANE Select transcript:
NM_007363
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7871 |
| Approved symbol | NONO |
| Name | non-POU domain containing octamer binding |
| Location | Xq13.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | p54(NRB), NRB54, NMT55, P54NRB, P54, PPP1R114 |
| Ensembl gene | ENSG00000147140 |
| Ensembl biotype | protein_coding |
| OMIM | 300084 |
| Entrez | 4841 |
Gene structure
Transcript identifiers
Ensembl transcripts: 61 — 39 protein_coding, 12 retained_intron, 6 protein_coding_CDS_not_defined, 4 nonsense_mediated_decay
ENST00000276079, ENST00000373841, ENST00000373856, ENST00000413858, ENST00000418921, ENST00000420903, ENST00000450092, ENST00000454976, ENST00000471419, ENST00000472185, ENST00000473525, ENST00000474431, ENST00000486613, ENST00000490044, ENST00000535149, ENST00000676495, ENST00000676499, ENST00000676797, ENST00000677014, ENST00000677218, ENST00000677245, ENST00000677274, ENST00000677446, ENST00000677612, ENST00000677766, ENST00000677826, ENST00000677879, ENST00000677977, ENST00000678231, ENST00000678323, ENST00000678335, ENST00000678414, ENST00000678437, ENST00000678660, ENST00000678830, ENST00000678852, ENST00000679029, ENST00000679062, ENST00000679254, ENST00000679267, ENST00000861754, ENST00000861755, ENST00000861756, ENST00000861757, ENST00000861758, ENST00000936524, ENST00000936525, ENST00000936526, ENST00000936527, ENST00000936528, ENST00000936529, ENST00000936530, ENST00000936531, ENST00000936532, ENST00000936533, ENST00000936534, ENST00000936535, ENST00000936536, ENST00000959799, ENST00000959800, ENST00000959801
RefSeq mRNA: 4 — MANE Select: NM_007363
NM_001145408, NM_001145409, NM_001145410, NM_007363
CCDS: CCDS14410, CCDS55445
Canonical transcript exons
ENST00000276079 — 12 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001209504 | 71284397 | 71284453 |
| ENSE00001814876 | 71283635 | 71283721 |
| ENSE00003464857 | 71298707 | 71298816 |
| ENSE00003480304 | 71291779 | 71291972 |
| ENSE00003483535 | 71294227 | 71294528 |
| ENSE00003490510 | 71299942 | 71301168 |
| ENSE00003526418 | 71290629 | 71290791 |
| ENSE00003538254 | 71297377 | 71297461 |
| ENSE00003586506 | 71296851 | 71297047 |
| ENSE00003649071 | 71298469 | 71298508 |
| ENSE00003656065 | 71297836 | 71297938 |
| ENSE00003667938 | 71296565 | 71296660 |
Expression profiles
Bgee: expression breadth ubiquitous, 168 present calls, max score 99.62.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 117.1734 / max 1506.8661, expressed in 1823 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 196672 | 87.8371 | 1823 |
| 196677 | 15.2800 | 1759 |
| 196673 | 7.9947 | 1742 |
| 196679 | 1.4822 | 768 |
| 196678 | 1.2861 | 767 |
| 196675 | 1.0478 | 671 |
| 196676 | 0.8176 | 486 |
| 196671 | 0.8056 | 516 |
| 196670 | 0.5843 | 300 |
| 196674 | 0.0382 | 16 |
Top tissues by expression
168 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| endometrium epithelium | UBERON:0004811 | 99.62 | gold quality |
| embryo | UBERON:0000922 | 99.60 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.60 | gold quality |
| ventricular zone | UBERON:0003053 | 99.54 | gold quality |
| cortical plate | UBERON:0005343 | 99.46 | gold quality |
| thymus | UBERON:0002370 | 99.35 | gold quality |
| trachea | UBERON:0003126 | 99.20 | gold quality |
| cerebellar vermis | UBERON:0004720 | 99.13 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 99.09 | gold quality |
| paraflocculus | UBERON:0005351 | 99.09 | gold quality |
| stromal cell of endometrium | CL:0002255 | 99.06 | gold quality |
| ovary | UBERON:0000992 | 99.02 | gold quality |
| left ovary | UBERON:0002119 | 99.00 | gold quality |
| calcaneal tendon | UBERON:0003701 | 98.99 | gold quality |
| right ovary | UBERON:0002118 | 98.96 | gold quality |
| islet of Langerhans | UBERON:0000006 | 98.91 | gold quality |
| body of pancreas | UBERON:0001150 | 98.85 | gold quality |
| pancreas | UBERON:0001264 | 98.80 | gold quality |
| left adrenal gland | UBERON:0001234 | 98.78 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 98.77 | gold quality |
| adenohypophysis | UBERON:0002196 | 98.76 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 98.76 | gold quality |
| right adrenal gland | UBERON:0001233 | 98.72 | gold quality |
| pituitary gland | UBERON:0000007 | 98.70 | gold quality |
| cerebellum | UBERON:0002037 | 98.69 | gold quality |
| cerebellar cortex | UBERON:0002129 | 98.67 | gold quality |
| adrenal tissue | UBERON:0018303 | 98.67 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 98.66 | gold quality |
| body of uterus | UBERON:0009853 | 98.64 | gold quality |
| cortex of kidney | UBERON:0001225 | 98.63 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-112 | yes | 44.44 |
| E-CURD-114 | yes | 7.52 |
| E-HCAD-5 | no | 21.77 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
22 targets.
| Target | Regulation |
|---|---|
| AR | |
| BANF1 | |
| BIRC5 | Unknown |
| COL2A1 | Activation |
| CYP17A1 | |
| GJA1 | |
| HTT | |
| IL27 | |
| IRF6 | |
| KLK3 | |
| MIA | Unknown |
| NONO | |
| NOS3 | |
| OCLN | |
| PGR | Repression |
| POU5F1 | Unknown |
| PRL | |
| PSIP1 | |
| RBP4 | |
| RHO | |
| SNCA | |
| TOP2B |
Upstream regulators (CollecTRI, top): ESR1, IRF6, NONO
miRNA regulators (miRDB)
58 targeting NONO, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
| HSA-MIR-1229-3P | 99.97 | 66.49 | 906 |
| HSA-MIR-767-5P | 99.95 | 70.85 | 993 |
| HSA-MIR-185-3P | 99.95 | 67.01 | 1743 |
| HSA-MIR-6783-3P | 99.89 | 67.92 | 2059 |
| HSA-MIR-7856-5P | 99.75 | 69.99 | 2901 |
| HSA-MIR-10393-5P | 99.65 | 68.01 | 1368 |
| HSA-MIR-7844-5P | 99.55 | 68.56 | 1428 |
| HSA-MIR-4489 | 99.50 | 65.56 | 785 |
| HSA-MIR-136-5P | 99.50 | 67.26 | 1153 |
| HSA-MIR-6740-3P | 99.48 | 68.49 | 1392 |
| HSA-MIR-1275 | 99.47 | 67.90 | 2749 |
| HSA-MIR-3612 | 99.45 | 66.02 | 1333 |
| HSA-MIR-650 | 99.45 | 65.77 | 1309 |
| HSA-MIR-519D-5P | 99.41 | 69.30 | 2057 |
| HSA-MIR-501-3P | 99.33 | 66.12 | 651 |
| HSA-MIR-502-3P | 99.33 | 66.12 | 651 |
| HSA-MIR-7515 | 99.31 | 68.22 | 1795 |
| HSA-MIR-4477B | 99.23 | 70.49 | 1733 |
| HSA-MIR-4426 | 99.17 | 66.74 | 1949 |
| HSA-MIR-3675-3P | 99.09 | 67.70 | 968 |
| HSA-MIR-140-3P | 99.04 | 67.69 | 1324 |
| HSA-MIR-6814-5P | 99.03 | 66.68 | 1273 |
| HSA-MIR-4801 | 98.96 | 69.42 | 2096 |
| HSA-MIR-3145-5P | 98.57 | 67.83 | 900 |
| HSA-MIR-4731-3P | 98.56 | 68.60 | 1860 |
Functional genomics
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
DepMap (CRISPR cell-line fitness): dependent in 12.5% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- The nmt55/p54nrb protein is post-transcriptionally regulated in human breast tumors leading to reduced expression in ER- tumors and the expression of an amino terminal altered isoform in a subset of ER+ tumors. (PMID:11710964)
- PSF and p54nrb bind U5 snRNA with both the sequence and structure of stem 1b contributing to binding specificity.PSF interacts with p54nrb (PMID:12403470)
- Review article of p54 as a multi-functional nuclear protein. (PMID:12417296)
- nmt55 expression is related to hormone-dependency or -independence associated with the androgen receptor (PMID:12672026)
- Results suggest that p54(nrb) functions as a coactivator of androgen receptors that potentiates transcription and possibly splicing. (PMID:12810069)
- p54nrb and PSF have properties of key factors mediating INS function and likely define a novel mRNA regulatory pathway that is hijacked by HIV-1. (PMID:12944487)
- p54(nrb), which binds the C-terminal domain of the largest subunit of RNAPII, can interact directly with the 5’ SS indicates that these factors may mediate contacts between RNA polymerase II (PMID:15057275)
- The PSF.p54(nrb) complex cooperates with Ku protein to form a functional preligation complex with substrate DNA (PMID:15590677)
- Thus paraspeckles are the sites where a subset of the total cellular pool of p54nrb is targeted in a RNA Polymerase II-dependent manner. (PMID:16148043)
- These data demonstrated that PSF and p54nrb complex with AR and play a key role in modulating AR-mediated gene transcription. (PMID:17452459)
- Identification of PSF, p54(nrb), PTB, and U1A as proteins specifically bound to the COX-2 polyadenylation signal upstream sequence elements . (PMID:17507659)
- p54 is present along the length of genes, and small interfering RNA (siRNA)-mediated knockdown leads to defects in XRN2 recruitment and termination. (PMID:17639083)
- Findings suggest that the PSF.p54nrb complex is a novel MAP kinase signal-integrating kinases substrate that binds the mRNA for tumor necrosis factor alpha. (PMID:17965020)
- at the TERT gene locus in human tumour cells containing a functional SWI/SNF complex, Brm, and possibly BRG1, in concert with p54(nrb), would initiate efficient transcription and could be involved in the subsequent splicing of TERT transcripts (PMID:18042045)
- NONO is a TORC-interacting protein that is necessary for cAMP-dependent activation of CREB target genes in vivo. TORC2 and NONO complex on cAMP-responsive promoters, and NONO acts as a bridge between the CREB/TORC complex and RNA polymerase II. (PMID:18077367)
- TORC2 and NONO complex on cAMP-responsive promoters, and NONO acts as a bridge between the CREB/TORC complex and RNA polymerase II. (PMID:18077367)
- Co-expression with polypyrimidine tract-binding protein-associated splicing factor (PSF) relocates oncogenic RING finger protein 43 (RNF43) from the nuclear periphery to the nucleoplasm. (PMID:18655028)
- p54nrb plays an important role in the regulation of Sox9 function and the formation of paraspeckle bodies during chondrogenesis (PMID:18677406)
- SOCS3 regulates the action of NonO to suppress MUC8 transcriptional activation. (PMID:18952062)
- Using shotgun mass spectrometry, we found this protein differentially expressed in the dorsolateral prefrontal cortex from patients with schizophrenia. (PMID:19165527)
- p54nrb is a transcriptional corepressor of the progesterone receptor that modulates transcription of the labor-associated gene, connexin 43 (Gja1) (PMID:19423654)
- confirm the interactions of eEF1A1, p54(nrb), hnRNP-L, GAPDH and ASF/SF2 with the right terminal stem-loop domain of HDV genomic RNA in vitro (PMID:19464723)
- PSF (polypyrimidine tract-binding protein-associated splicing factor) and p54(nrb), two highly related proteins involved in transcription and RNA processing, are identified as new binding partners of hnRNP M. (PMID:19874820)
- NONO/SFPQ heterodimer is involved in the early stage of the DSB response. (PMID:20421735)
- RVxF motifs play an important role in controlling the multifunctional properties of p54nrb and PSF in the regulation of gene transcription (PMID:21566083)
- High p54nrb is associated with malignant melanoma. (PMID:21642354)
- p54(nrb) interaction with RNA could be selectively modulated by phosphorylation during mitosis (PMID:21819346)
- Study showed that Rasd1 and NonO interact at the CRE-site of specific target genes. (PMID:21915321)
- crystal of PSPC1-NONO contained one heterodimer in the asymmetric unit and diffracted to 1.9 A resolution using synchrotron radiation (PMID:22102035)
- Localisation of TopBP1 at DNA damage sites was noticed as early as 5 s following damage induction, whereas p54(nrb) and PSF localised there after 20 s. (PMID:22213094)
- The crystal structure of the heterodimer of the multidomain conserved region of the Drosophila behavior/human splicing proteins, PSPC1 and NONO, is described. (PMID:22416126)
- p54 is essential for GC-mediated expression of occludin, claudin-5, and barrier induction, and the p54/PSF heterodimer may contribute to normal blood-retinal barrier (BRB) induction in vivo. (PMID:23640037)
- Patients with aortic dissection (AD)exhibited significantly decreased expression of P54(nrb) /NonO. The significant correlation between P54(nrb) /NonO and collagen may point to novel thinking about collagen metabolism research in AD aorta. (PMID:24720418)
- silencing p54(nrb)/NONO expression in H295R human adrenocortical cells decreases the ability of the cells to increase intracellular cAMP production and subsequent cortisol biosynthesis in response to adrenocorticotropin hormone (ACTH) stimulation. (PMID:25605330)
- The ability of the SFPQ/NONO complex to form varying protein assemblies, in conjunction with the effect of post-translational modifications of SFPQ modulating mRNA binding, suggests key roles affecting mRNP dynamics within the cell. (PMID:25605962)
- These data suggest that NonO negatively regulates HIV-1 infection in CD4(+) T cells, highlighting the importance of host proteins associated with HIV-1 preintegration complexes in regulating viral replication. (PMID:25769457)
- Data uncover a new role for NONO in mediating the cellular response to UV-induced DNA damage. (PMID:25893301)
- suggest that SFPQ.NONO promotes end joining by binding to internal DNA sequences and cooperating with other repair proteins to stabilize a synaptic pre-ligation complex (PMID:25998385)
- Subnuclear re-localization of SOX10 and p54NRB correlates with a unique neurological phenotype associated with SOX10 missense mutations (PMID:26060192)
- p54(nrb) is a novel regulator of SREBP-1a in the nucleus, and the data suggest that p54(nrb) regulation of SREBP-1a supports the increased cellular demand of lipids for breast cancer growth. (PMID:26148231)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | nono | ENSDARG00000020482 |
| mus_musculus | Nono | ENSMUSG00000031311 |
| rattus_norvegicus | Nono | ENSRNOG00000003689 |
| drosophila_melanogaster | nonA | FBGN0004227 |
| drosophila_melanogaster | nonA-l | FBGN0015520 |
| drosophila_melanogaster | nito | FBGN0027548 |
Paralogs (7): SPEN (ENSG00000065526), SFPQ (ENSG00000116560), PSPC1 (ENSG00000121390), RAVER1 (ENSG00000161847), RAVER2 (ENSG00000162437), RBM15 (ENSG00000162775), RBM15B (ENSG00000259956)
Protein
Protein identifiers
Non-POU domain-containing octamer-binding protein — Q15233 (reviewed: Q15233)
Alternative names: 54 kDa nuclear RNA- and DNA-binding protein, 55 kDa nuclear protein, DNA-binding p52/p100 complex, 52 kDa subunit
All UniProt accessions (16): Q15233, A0A0S2Z4Z9, A0A7I2V447, A0A7I2V464, A0A7I2V4J2, A0A7I2V4K9, A0A7I2V4N2, A0A7I2V535, A0A7I2V5Y7, A0A7I2YQK8, A0A7P0MRW0, C9IZL7, C9J4X2, C9JJ13, C9JYS8, H7C367
UniProt curated annotations — full annotation on UniProt →
Function. DNA- and RNA binding protein, involved in several nuclear processes. Binds the conventional octamer sequence in double-stranded DNA. Also binds single-stranded DNA and RNA at a site independent of the duplex site. Involved in pre-mRNA splicing, probably as a heterodimer with SFPQ. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3’ side of U5 snRNA stem 1b. Together with PSPC1, required for the formation of nuclear paraspeckles. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclear retention of defective RNAs. The SFPQ-NONO heteromer may be involved in DNA unwinding by modulating the function of topoisomerase I/TOP1. The SFPQ-NONO heteromer may be involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination and may stabilize paired DNA ends. In vitro, the complex strongly stimulates DNA end joining, binds directly to the DNA substrates and cooperates with the Ku70/G22P1-Ku80/XRCC5 (Ku) dimer to establish a functional preligation complex. NONO is involved in transcriptional regulation. The SFPQ-NONO-NR5A1 complex binds to the CYP17 promoter and regulates basal and cAMP-dependent transcriptional activity. NONO binds to an enhancer element in long terminal repeats of endogenous intracisternal A particles (IAPs) and activates transcription. Regulates the circadian clock by repressing the transcriptional activator activity of the CLOCK-BMAL1 heterodimer. Important for the functional organization of GABAergic synapses. Plays a specific and important role in the regulation of synaptic RNAs and GPHN/gephyrin scaffold structure, through the regulation of GABRA2 transcript. Plays a key role during neuronal differentiation by recruiting TET1 to genomic loci and thereby regulating 5-hydroxymethylcytosine levels. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway. Promotes activation of the cGAS-STING pathway in response to HIV-2 infection: acts by interacting with HIV-2 Capsid protein p24, thereby promoting detection of viral DNA by CGAS, leading to CGAS-mediated inmmune activation. In contrast, the weak interaction with HIV-1 Capsid protein p24 does not allow activation of the cGAS-STING pathway.
Subunit / interactions. Monomer and component of the SFPQ-NONO complex, which is probably a heterotetramer of two 52 kDa (NONO) and two 100 kDa (SFPQ) subunits. NONO is a component of spliceosome and U5.4/6 snRNP complexes. Interacts with CPNE4 (via VWFA domain). Forms heterodimers with PSPC1; this involves formation of a coiled coil domain by helices from both proteins. Part of complex consisting of SFPQ, NONO and MATR3. Part of a complex consisting of SFPQ, NONO and NR5A1. Part of a complex consisting of SFPQ, NONO and TOP1. Interacts with SPI1 and SPIB. Interacts with RNF43. Interacts with PER1 and PER2. Part of the HDP-RNP complex composed of at least HEXIM1, PRKDC, XRCC5, XRCC6, paraspeckle proteins (SFPQ, NONO, PSPC1, RBM14, and MATR3) and NEAT1 RNA. Interacts (via second RRM domain) with WASL; the interaction is direct. Component of a multiprotein complex with WASL and SFPQ. Interacts with ERCC6. Interacts (via DNA-binding domain) with TET1. (Microbial infection) Interacts with HIV-2 Capsid protein p24; interacts with high affinity. Interacts with HIV-1 Capsid protein p24; interacts with low affinity.
Subcellular location. Nucleus. Nucleolus. Nucleus speckle. Chromosome.
Tissue specificity. Heart, brain, placenta, lung, liver, skeletal muscle, kidney and pancreas. Also found in a number of breast tumor cell lines.
Post-translational modifications. The N-terminus is blocked.
Disease relevance. A chromosomal aberration involving NONO may be a cause of papillary renal cell carcinoma (PRCC). Translocation t(X;X)(p11.2;q13.1) with TFE3. Intellectual developmental disorder, X-linked, syndromic 34 (MRXS34) [MIM:300967] A syndrome characterized by intellectual deficit, delayed psychomotor development, poor speech, and dysmorphic features. The disease is caused by variants affecting the gene represented in this entry.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q15233-1 | 1 | yes |
| Q15233-2 | 2 |
RefSeq proteins (4): NP_001138880, NP_001138881, NP_001138882, NP_031389* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000504 | RRM_dom | Domain |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Homologous_superfamily |
| IPR012975 | NOPS | Domain |
| IPR034552 | p54nrb_RRM1 | Domain |
| IPR035979 | RBD_domain_sf | Homologous_superfamily |
Pfam: PF00076, PF08075
UniProt features (65 total): modified residue 13, strand 12, cross-link 11, helix 11, sequence conflict 4, region of interest 3, domain 2, mutagenesis site 2, compositionally biased region 2, chain 1, splice variant 1, turn 1, coiled-coil region 1, site 1
Structure
Experimental structures (PDB)
9 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7LRU | X-RAY DIFFRACTION | 1.6 |
| 3SDE | X-RAY DIFFRACTION | 1.9 |
| 7LRQ | X-RAY DIFFRACTION | 2.3 |
| 9QXZ | X-RAY DIFFRACTION | 2.5 |
| 9NZI | X-RAY DIFFRACTION | 2.52 |
| 5IFM | X-RAY DIFFRACTION | 2.6 |
| 6WMZ | X-RAY DIFFRACTION | 2.85 |
| 9QZL | X-RAY DIFFRACTION | 2.9 |
| 7PU5 | X-RAY DIFFRACTION | 3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q15233-F1 | 77.76 | 0.55 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 377–378 (breakpoint for translocation to form nono-tfe3)
Post-translational modifications (24): 1, 5, 6, 11, 147, 198, 262, 295, 371, 428, 440, 450, 456, 5, 60, 96, 99, 126, 190, 198 …
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 267 | abolishes interaction with pspc1 and localization in nuclear paraspeckles; when associated with a-271. |
| 271 | abolishes interaction with pspc1 and localization in nuclear paraspeckles; when associated with a-267. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 550 (showing top):
GOBP_CIRCADIAN_RHYTHM, MORF_MTA1, RNGTGGGC_UNKNOWN, FXR_IR1_Q6, MORF_DNMT1, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS, MORF_SMC1L1, TGCGCANK_UNKNOWN, PAL_PRMT5_TARGETS_UP, GCM_NPM1, STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, MORF_UBE2I, CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN, GOBP_RESPONSE_TO_ANGIOTENSIN
GO Biological Process (17): activation of innate immune response (GO:0002218), DNA repair (GO:0006281), DNA recombination (GO:0006310), regulation of DNA-templated transcription (GO:0006355), mRNA processing (GO:0006397), circadian rhythm (GO:0007623), RNA splicing (GO:0008380), regulation of circadian rhythm (GO:0042752), innate immune response (GO:0045087), negative regulation of DNA-templated transcription (GO:0045892), cellular response to hypoxia (GO:0071456), negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway (GO:1903377), cellular response to angiotensin (GO:1904385), immune system process (GO:0002376), DNA damage response (GO:0006974), negative regulation of apoptotic process (GO:0043066), rhythmic process (GO:0048511)
GO Molecular Function (7): DNA binding (GO:0003677), chromatin binding (GO:0003682), RNA binding (GO:0003723), identical protein binding (GO:0042802), lncRNA binding (GO:0106222), nucleic acid binding (GO:0003676), protein binding (GO:0005515)
GO Cellular Component (10): fibrillar center (GO:0001650), nucleus (GO:0005634), nucleoplasm (GO:0005654), chromosome (GO:0005694), membrane (GO:0016020), nuclear matrix (GO:0016363), nuclear speck (GO:0016607), paraspeckles (GO:0042382), RNA polymerase II transcription regulator complex (GO:0090575), nucleolus (GO:0005730)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| binding | 3 |
| nuclear lumen | 3 |
| DNA metabolic process | 2 |
| DNA-templated transcription | 2 |
| RNA processing | 2 |
| cellular response to stress | 2 |
| biological_process | 2 |
| nucleic acid binding | 2 |
| intracellular membraneless organelle | 2 |
| nuclear ribonucleoprotein granule | 2 |
| activation of immune response | 1 |
| positive regulation of innate immune response | 1 |
| DNA damage response | 1 |
| regulation of gene expression | 1 |
| regulation of RNA biosynthetic process | 1 |
| mRNA metabolic process | 1 |
| rhythmic process | 1 |
| circadian rhythm | 1 |
| regulation of biological process | 1 |
| immune response | 1 |
| defense response to symbiont | 1 |
| regulation of DNA-templated transcription | 1 |
| negative regulation of RNA biosynthetic process | 1 |
| response to hypoxia | 1 |
| cellular response to decreased oxygen levels | 1 |
| neuron intrinsic apoptotic signaling pathway in response to oxidative stress | 1 |
| negative regulation of neuron apoptotic process | 1 |
| negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway | 1 |
| regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway | 1 |
| cellular response to peptide hormone stimulus | 1 |
| response to angiotensin | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| protein binding | 1 |
| RNA binding | 1 |
| nucleolus | 1 |
| intracellular membrane-bounded organelle | 1 |
| transcription regulator complex | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
293 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| PSPC1 | NONO | psi-mi:“MI:0915”(physical association) | 0.940 |
| NONO | PSPC1 | psi-mi:“MI:0915”(physical association) | 0.940 |
| MED10 | MED19 | psi-mi:“MI:0914”(association) | 0.910 |
| NONO | SFPQ | psi-mi:“MI:0915”(physical association) | 0.900 |
| SFPQ | NONO | psi-mi:“MI:2364”(proximity) | 0.900 |
| MED29 | MED19 | psi-mi:“MI:0914”(association) | 0.890 |
| NONO | NONO | psi-mi:“MI:0915”(physical association) | 0.860 |
| NONO | NONO | psi-mi:“MI:0407”(direct interaction) | 0.860 |
| H2AX | PARP1 | psi-mi:“MI:0914”(association) | 0.840 |
| MED9 | MED19 | psi-mi:“MI:0914”(association) | 0.790 |
| YBX1 | HNRNPR | psi-mi:“MI:0914”(association) | 0.770 |
| EZH2 | EPOP | psi-mi:“MI:0914”(association) | 0.730 |
| MED19 | MED19 | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| PSPC1 | NONO | psi-mi:“MI:0915”(physical association) | 0.690 |
BioGRID (1256): PTBP1 (Reconstituted Complex), SFPQ (Affinity Capture-Western), NONO (Affinity Capture-MS), NONO (Affinity Capture-MS), NONO (Two-hybrid), NONO (Two-hybrid), PIN1 (Two-hybrid), PRKAA2 (Two-hybrid), LMO4 (Two-hybrid), PSPC1 (Two-hybrid), C11orf68 (Two-hybrid), NONO (Two-hybrid), NONO (Protein-peptide), NONO (Affinity Capture-MS), NONO (Affinity Capture-MS)
ESM2 similar proteins: A0A8M1NHK4, A0AV96, B3M3R5, B4KX02, O22173, O43347, P86049, Q05196, Q15233, Q1LZD9, Q32NN2, Q3UEB3, Q4KLH4, Q5R469, Q5R5P4, Q5R9H4, Q5RFL9, Q5W9D5, Q5W9D6, Q5W9D7, Q5YD48, Q61474, Q66H68, Q6DEY7, Q6GR16, Q6IRN2, Q6P0D0, Q7JJZ8, Q8GZ26, Q8K3P4, Q8MSV2, Q8R326, Q8TBY0, Q8WXF1, Q91WT8, Q91XU1, Q920Q6, Q923K9, Q96DH6, Q96PU8
Diamond homologs: A0A0R4IEW8, A0JM51, A3LXL0, A4QNI8, A5DM21, A5DW14, A8WLV5, B3M3R5, B3NGA1, B4HUE4, B4IX08, B4KX02, B4LFQ9, B4MM23, B4PIS2, B4QRJ0, B5DF91, F1QB54, O01671, O09032, O17310, O22173, O57406, O61374, O95319, O97018, P04147, P11940, P16914, P19339, P20965, P23241, P26378, P28659, P29341, P29558, P61286, P70372, P82277, Q08E07
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| NONO | “form complex” | NONO/SFPQ | binding |
| NONO | up-regulates | TOP1 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 193 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Processing of Capped Intron-Containing Pre-mRNA | 11 | 6.7× | 6e-04 |
| mRNA Polyadenylation | 9 | 5.9× | 4e-03 |
| mRNA Splicing - Major Pathway | 12 | 4.9× | 2e-03 |
| Viral Infection Pathways | 15 | 3.5× | 5e-03 |
| Infectious disease | 18 | 3.3× | 2e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| stress granule assembly | 5 | 18.5× | 2e-03 |
| activation of innate immune response | 5 | 14.8× | 3e-03 |
| positive regulation of transcription elongation by RNA polymerase II | 7 | 12.9× | 4e-04 |
| positive regulation of translation | 7 | 9.8× | 2e-03 |
| regulation of alternative mRNA splicing, via spliceosome | 6 | 9.0× | 7e-03 |
| mRNA splicing, via spliceosome | 12 | 6.7× | 1e-04 |
| mRNA processing | 11 | 5.3× | 2e-03 |
| chromatin remodeling | 10 | 4.5× | 1e-02 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
258 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 23 |
| Likely pathogenic | 10 |
| Uncertain significance | 98 |
| Likely benign | 44 |
| Benign | 16 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1098343 | NM_007363.5(NONO):c.1131+1G>A | Pathogenic |
| 1700145 | NM_007363.5(NONO):c.710del (p.Pro237fs) | Pathogenic |
| 1700214 | NM_007363.5(NONO):c.279_282del (p.Phe94fs) | Pathogenic |
| 1700215 | NM_007363.5(NONO):c.201_202dup (p.Lys68fs) | Pathogenic |
| 1704653 | NM_007363.5(NONO):c.154+1GT[2] | Pathogenic |
| 1805981 | NM_007363.5(NONO):c.298_307del (p.Ala100fs) | Pathogenic |
| 222081 | NM_007363.5(NONO):c.1131G>A (p.Ala377=) | Pathogenic |
| 222082 | NM_007363.5(NONO):c.1394dup (p.Asn466fs) | Pathogenic |
| 222083 | NM_007363.5(NONO):c.1093C>T (p.Arg365Ter) | Pathogenic |
| 235099 | NM_007363.5(NONO):c.1171+1G>T | Pathogenic |
| 2429456 | NM_007363.5(NONO):c.348+2_348+15del | Pathogenic |
| 3655631 | NM_007363.5(NONO):c.1071dup (p.Gln358fs) | Pathogenic |
| 373550 | NM_007363.5(NONO):c.230_231del (p.Phe77fs) | Pathogenic |
| 392246 | NM_007363.5(NONO):c.103C>T (p.Gln35Ter) | Pathogenic |
| 424120 | NM_007363.5(NONO):c.1289del (p.Pro430fs) | Pathogenic |
| 426955 | NM_007363.5(NONO):c.1009C>T (p.Arg337Ter) | Pathogenic |
| 427778 | NM_007363.5(NONO):c.1171G>T (p.Gly391Cys) | Pathogenic |
| 432295 | NM_007363.5(NONO):c.217C>T (p.Arg73Ter) | Pathogenic |
| 438778 | NM_007363.5(NONO):c.731dup (p.Asn244fs) | Pathogenic |
| 647910 | NM_007363.5(NONO):c.245del (p.Pro82fs) | Pathogenic |
| 691621 | NM_007363.5(NONO):c.550C>T (p.Arg184Ter) | Pathogenic |
| 807452 | NM_007363.5(NONO):c.107del (p.Pro36fs) | Pathogenic |
| 833999 | NM_007363.5(NONO):c.457C>T (p.Arg153Ter) | Pathogenic |
| 1217289 | NM_007363.5(NONO):c.322_348+280del | Likely pathogenic |
| 1526229 | NM_007363.5(NONO):c.315_318del (p.His106fs) | Likely pathogenic |
| 1679353 | NM_007363.5(NONO):c.1242del (p.Gly415fs) | Likely pathogenic |
| 2429175 | NM_007363.5(NONO):c.276_288del (p.Lys92fs) | Likely pathogenic |
| 3068943 | NM_007363.5(NONO):c.332_348+280del | Likely pathogenic |
| 3254829 | NM_007363.5(NONO):c.1132-1G>A | Likely pathogenic |
| 3764771 | NC_000023.11:g.71298467AG[3] | Likely pathogenic |
SpliceAI
1797 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:71283718:GAGG:G | donor_gain | 1.0000 |
| X:71283720:GG:G | donor_gain | 1.0000 |
| X:71283720:GGGTG:G | donor_loss | 1.0000 |
| X:71283721:GG:G | donor_gain | 1.0000 |
| X:71283722:G:GG | donor_gain | 1.0000 |
| X:71283723:T:G | donor_loss | 1.0000 |
| X:71290626:TAGGG:T | acceptor_loss | 1.0000 |
| X:71290627:AG:A | acceptor_gain | 1.0000 |
| X:71290628:GG:G | acceptor_gain | 1.0000 |
| X:71290792:G:GG | donor_gain | 1.0000 |
| X:71290803:C:G | donor_gain | 1.0000 |
| X:71291777:A:AG | acceptor_gain | 1.0000 |
| X:71291778:G:GA | acceptor_gain | 1.0000 |
| X:71291778:GA:G | acceptor_gain | 1.0000 |
| X:71291778:GAT:G | acceptor_gain | 1.0000 |
| X:71291886:G:GT | donor_gain | 1.0000 |
| X:71291898:A:T | donor_gain | 1.0000 |
| X:71291918:A:T | donor_gain | 1.0000 |
| X:71291923:C:T | donor_gain | 1.0000 |
| X:71291946:GA:G | donor_gain | 1.0000 |
| X:71291953:G:GT | donor_gain | 1.0000 |
| X:71291968:GCTTG:G | donor_gain | 1.0000 |
| X:71291973:GT:G | donor_loss | 1.0000 |
| X:71291974:TGAG:T | donor_loss | 1.0000 |
| X:71291975:GA:G | donor_loss | 1.0000 |
| X:71294217:T:TA | acceptor_gain | 1.0000 |
| X:71294223:CTA:C | acceptor_loss | 1.0000 |
| X:71294224:TAGGA:T | acceptor_loss | 1.0000 |
| X:71294225:A:AG | acceptor_gain | 1.0000 |
| X:71294225:AG:A | acceptor_gain | 1.0000 |
AlphaMissense
3122 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:71291832:T:C | F70L | 1.000 |
| X:71291834:C:A | F70L | 1.000 |
| X:71291834:C:G | F70L | 1.000 |
| X:71291842:G:C | R73P | 1.000 |
| X:71291844:A:C | S74R | 1.000 |
| X:71291846:C:A | S74R | 1.000 |
| X:71291846:C:G | S74R | 1.000 |
| X:71291847:C:A | R75S | 1.000 |
| X:71291847:C:G | R75G | 1.000 |
| X:71291848:G:C | R75P | 1.000 |
| X:71291850:C:T | L76F | 1.000 |
| X:71291851:T:A | L76H | 1.000 |
| X:71291851:T:C | L76P | 1.000 |
| X:71291851:T:G | L76R | 1.000 |
| X:71291853:T:A | F77I | 1.000 |
| X:71291853:T:C | F77L | 1.000 |
| X:71291853:T:G | F77V | 1.000 |
| X:71291854:T:C | F77S | 1.000 |
| X:71291854:T:G | F77C | 1.000 |
| X:71291855:T:A | F77L | 1.000 |
| X:71291855:T:G | F77L | 1.000 |
| X:71291857:T:A | V78E | 1.000 |
| X:71291859:G:A | G79R | 1.000 |
| X:71291859:G:C | G79R | 1.000 |
| X:71291860:G:A | G79E | 1.000 |
| X:71291860:G:T | G79V | 1.000 |
| X:71291864:T:A | N80K | 1.000 |
| X:71291864:T:G | N80K | 1.000 |
| X:71291866:T:A | L81H | 1.000 |
| X:71291866:T:C | L81P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000131078 (X:71300228 G>A,T), RS1000182270 (X:71300659 G>A), RS1000387161 (X:71291345 C>T), RS1000736990 (X:71290869 G>A), RS1000872402 (X:71284260 C>T), RS1000984946 (X:71283806 G>A), RS1001165671 (X:71286372 C>T), RS1001491023 (X:71286754 T>C), RS1001519087 (X:71296391 C>T), RS1001609325 (X:71301609 C>A,G), RS1001776878 (X:71282235 C>G,T), RS1002093664 (X:71284545 A>G), RS1002178005 (X:71292436 G>A), RS1002464378 (X:71285035 A>G,T), RS1002502617 (X:71293524 A>C,G)
Disease associations
OMIM: gene MIM:300084 | disease phenotypes: MIM:300967, MIM:155255
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| neurodevelopmental disorder | Definitive | X-linked |
| syndromic X-linked intellectual disability 34 | Strong | X-linked |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| X-linked syndromic intellectual disability | Definitive | XL |
Mondo (4): syndromic X-linked intellectual disability 34 (MONDO:0010501), intellectual disability (MONDO:0001071), medulloblastoma (MONDO:0007959), neurodevelopmental disorder (MONDO:0700092)
Orphanet (3): Macrocephaly-intellectual disability-left ventricular non compaction syndrome (Orphanet:466791), Medulloblastoma (Orphanet:616), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
104 total (30 of 104 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000028 | Cryptorchidism |
| HP:0000154 | Wide mouth |
| HP:0000160 | Narrow mouth |
| HP:0000194 | Open mouth |
| HP:0000219 | Thin upper lip vermilion |
| HP:0000256 | Macrocephaly |
| HP:0000272 | Malar flattening |
| HP:0000276 | Long face |
| HP:0000286 | Epicanthus |
| HP:0000316 | Hypertelorism |
| HP:0000322 | Short philtrum |
| HP:0000325 | Triangular face |
| HP:0000426 | Prominent nasal bridge |
| HP:0000446 | Narrow nasal bridge |
| HP:0000448 | Prominent nose |
| HP:0000486 | Strabismus |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000545 | Myopia |
| HP:0000582 | Upslanted palpebral fissure |
| HP:0000678 | Dental crowding |
| HP:0000687 | Widely spaced teeth |
| HP:0000717 | Autism |
| HP:0000718 | Aggressive behavior |
| HP:0000739 | Anxiety |
| HP:0000750 | Delayed speech and language development |
| HP:0000823 | Delayed puberty |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
GWAS associations
0 associations (top):
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D008527 | Medulloblastoma | C04.557.465.625.600.380.515; C04.557.465.625.600.590.500; C04.557.470.670.380.515; C04.557.470.670.590.500; C04.557.580.625.600.380.515; C04.557.580.625.600.590.500 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5724613 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.29 | Kd | 51.73 | nM | CHEMBL5653589 |
| 7.29 | ED50 | 51.73 | nM | CHEMBL5653589 |
| 5.50 | Kd | 3169 | nM | CHEMBL3752910 |
| 5.50 | ED50 | 3169 | nM | CHEMBL3752910 |
PubChem BioAssay actives
2 with measured affinity, of 10 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148880: Binding affinity to human NONO incubated for 45 mins by Kinobead based pull down assay | kd | 0.0517 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148880: Binding affinity to human NONO incubated for 45 mins by Kinobead based pull down assay | kd | 3.1692 | uM |
CTD chemical–gene interactions
53 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression | 2 |
| Doxorubicin | decreases expression, decreases response to substance | 2 |
| tert-Butylhydroperoxide | decreases expression, decreases reaction, increases reaction | 2 |
| FR900359 | affects phosphorylation | 1 |
| bisphenol F | increases expression, affects cotreatment | 1 |
| biochanin A | decreases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| deoxynivalenol | increases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, increases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| trichostatin A | affects expression | 1 |
| methylparaben | increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| sodium arsenite | affects binding, increases reaction, increases activity | 1 |
| 16 alpha-ethyl-21-hydroxy-19-nor-4-pregnene-3,20-dione | decreases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| cupric oxide | decreases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| cyclic 3’,5’-uridine monophosphate | affects binding | 1 |
| salvianolic acid B | decreases expression, decreases reaction, increases reaction | 1 |
| CPG-oligonucleotide | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| bromovanin | decreases expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Caffeine | decreases phosphorylation | 1 |
ChEMBL screening assays
7 unique, capped per target: 7 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5651922 | Binding | Binding affinity to human NONO incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
7 cell lines: 4 cancer cell line, 2 transformed cell line, 1 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B087 | UOK109 | Cancer cell line | Male |
| CVCL_B3CK | Abcam HEK293T NONO KO | Transformed cell line | Female |
| CVCL_D7H1 | Ubigene HEK293T NONO KO | Transformed cell line | Female |
| CVCL_E2E9 | HAP1 NONO (-) 1 | Cancer cell line | Male |
| CVCL_E2EA | HAP1 NONO (-) 2 | Cancer cell line | Male |
| CVCL_E2EB | HAP1 NONO (-) 3 | Cancer cell line | Male |
| CVCL_ZX41 | CMUi002-A-1 | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
493 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02875314 | PHASE4 | ACTIVE_NOT_RECRUITING | HeadStart4: Newly Diagnosed Children (<10 y/o) With Medulloblastoma and Other CNS Embryonal Tumors |
| NCT04081701 | PHASE4 | RECRUITING | 68-Ga DOTATATE PET/MRI in the Diagnosis and Management of Somatostatin Receptor Positive CNS Tumors. |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
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| NCT00180791 | PHASE2 | UNKNOWN | High Risk Primitive Neuroectodermal (PNET) Brain Tumors in Childhood |
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| NCT00601003 | PHASE2 | COMPLETED | Study of Nifurtimox to Treat Refractory or Relapsed Neuroblastoma or Medulloblastoma |
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| NCT01217437 | PHASE2 | COMPLETED | Temozolomide and Irinotecan Hydrochloride With or Without Bevacizumab in Treating Young Patients With Recurrent or Refractory Medulloblastoma or CNS Primitive Neuroectodermal Tumors |
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Related Atlas pages
- Associated diseases: neurodevelopmental disorder, syndromic X-linked intellectual disability 34, X-linked syndromic intellectual disability
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): medulloblastoma, syndromic X-linked intellectual disability 34