NPPA
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Summary
NPPA (natriuretic peptide A, HGNC:7939) is a protein-coding gene on chromosome 1p36.22, encoding Natriuretic peptides A (P01160). Hormone that plays a key role in mediating cardio-renal homeostasis, and is involved in vascular remodeling and regulating energy metabolism.
The protein encoded by this gene belongs to the natriuretic peptide family. Natriuretic peptides are implicated in the control of extracellular fluid volume and electrolyte homeostasis. This protein is synthesized as a large precursor (containing a signal peptide), which is processed to release a peptide from the N-terminus with similarity to vasoactive peptide, cardiodilatin, and another peptide from the C-terminus with natriuretic-diuretic activity. Mutations in this gene have been associated with atrial fibrillation familial type 6. This gene is located adjacent to another member of the natriuretic family of peptides on chromosome 1.
Source: NCBI Gene 4878 — RefSeq curated summary.
At a glance
- Gene–disease (curated): atrial fibrillation, familial, 6 (Moderate, GenCC) — +4 more curated relationships
- GWAS associations: 39
- Clinical variants (ClinVar): 28 total — 1 pathogenic
- Phenotypes (HPO): 52
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_006172
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:7939 |
| Approved symbol | NPPA |
| Name | natriuretic peptide A |
| Location | 1p36.22 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000175206 |
| Ensembl biotype | protein_coding |
| OMIM | 108780 |
| Entrez | 4878 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 3 protein_coding
ENST00000376476, ENST00000376480, ENST00000953330
RefSeq mRNA: 1 — MANE Select: NM_006172
NM_006172
CCDS: CCDS139
Canonical transcript exons
ENST00000376480 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001470668 | 11845709 | 11846014 |
| ENSE00001470685 | 11847562 | 11847783 |
| ENSE00003491504 | 11847113 | 11847439 |
Expression profiles
Bgee: expression breadth ubiquitous, 218 present calls, max score 99.99.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 28.2154 / max 34863.9163, expressed in 89 samples.
FANTOM5 promoters (11 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 10337 | 27.5929 | 80 |
| 10338 | 0.3050 | 11 |
| 10335 | 0.1454 | 15 |
| 10333 | 0.0571 | 3 |
| 10339 | 0.0253 | 9 |
| 10332 | 0.0246 | 3 |
| 10331 | 0.0205 | 4 |
| 10336 | 0.0152 | 1 |
| 10340 | 0.0132 | 6 |
| 10341 | 0.0108 | 6 |
Top tissues by expression
268 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cardiac muscle of right atrium | UBERON:0003379 | 99.99 | gold quality |
| cardiac atrium | UBERON:0002081 | 99.98 | gold quality |
| right atrium auricular region | UBERON:0006631 | 99.98 | gold quality |
| vena cava | UBERON:0004087 | 98.77 | gold quality |
| apex of heart | UBERON:0002098 | 96.51 | gold quality |
| myocardium | UBERON:0002349 | 96.50 | gold quality |
| pancreatic ductal cell | CL:0002079 | 95.45 | gold quality |
| heart left ventricle | UBERON:0002084 | 94.38 | gold quality |
| cardiac ventricle | UBERON:0002082 | 94.19 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 93.55 | gold quality |
| heart | UBERON:0000948 | 93.39 | gold quality |
| heart right ventricle | UBERON:0002080 | 92.71 | gold quality |
| parotid gland | UBERON:0001831 | 87.32 | silver quality |
| triceps brachii | UBERON:0001509 | 86.27 | silver quality |
| gluteal muscle | UBERON:0002000 | 86.26 | silver quality |
| mucosa of stomach | UBERON:0001199 | 82.34 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 80.18 | gold quality |
| right frontal lobe | UBERON:0002810 | 79.30 | gold quality |
| adenohypophysis | UBERON:0002196 | 78.60 | gold quality |
| buccal mucosa cell | CL:0002336 | 77.40 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 77.08 | gold quality |
| omental fat pad | UBERON:0010414 | 76.96 | gold quality |
| skin of abdomen | UBERON:0001416 | 76.95 | gold quality |
| peritoneum | UBERON:0002358 | 76.93 | gold quality |
| gastrocnemius | UBERON:0001388 | 76.51 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 76.50 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 76.27 | gold quality |
| right testis | UBERON:0004534 | 76.15 | gold quality |
| cingulate cortex | UBERON:0003027 | 75.98 | gold quality |
| biceps brachii | UBERON:0001507 | 75.92 | silver quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-109979 | yes | 618.16 |
| E-ANND-3 | no | 1.58 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ANKRD1, AP1, ATF6, BMPR1A, CAMTA1, CEBPE, DLX3, DLX5, EDN1, EGR1, FOS, FOSL1, GATA4, GATA5, GATA6, HAND1, HAND2, HESX1, HEY2, HIF1A, HNF4A, HOPX, HOXB7, JARID2, JUN, JUNB, JUND, KAT5, KLF4, LEF1, MEF2A, MEF2C, MYOG, NFATC4, NFKB2, NFKB, NKX2-2, NKX2-5, NR2F2, NR2F6
miRNA regulators (miRDB)
24 targeting NPPA, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-6715A-3P | 99.83 | 68.05 | 1473 |
| HSA-MIR-139-5P | 99.80 | 69.50 | 1399 |
| HSA-MIR-5700 | 99.64 | 69.88 | 2280 |
| HSA-MIR-425-5P | 99.59 | 67.67 | 900 |
| HSA-MIR-6740-3P | 99.48 | 68.49 | 1392 |
| HSA-MIR-582-5P | 99.47 | 70.79 | 2635 |
| HSA-MIR-3182 | 99.40 | 68.15 | 2454 |
| HSA-MIR-6731-5P | 99.28 | 67.42 | 2375 |
| HSA-MIR-8085 | 99.28 | 67.56 | 2362 |
| HSA-MIR-196A-3P | 99.19 | 67.34 | 1204 |
| HSA-MIR-4426 | 99.17 | 66.74 | 1949 |
| HSA-MIR-6715B-3P | 98.80 | 68.07 | 1204 |
| HSA-MIR-1301-3P | 98.64 | 68.27 | 1071 |
| HSA-MIR-4710 | 98.61 | 65.96 | 1048 |
| HSA-MIR-5187-5P | 98.54 | 67.94 | 952 |
| HSA-MIR-1233-5P | 98.19 | 66.71 | 1201 |
| HSA-MIR-6778-5P | 98.19 | 66.59 | 1239 |
| HSA-MIR-1255B-2-3P | 97.80 | 67.04 | 880 |
| HSA-MIR-125A-3P | 97.04 | 66.92 | 902 |
| HSA-MIR-3907 | 96.76 | 65.04 | 662 |
| HSA-MIR-552-3P | 96.68 | 64.12 | 1026 |
| HSA-MIR-576-3P | 96.14 | 65.63 | 773 |
Literature-anchored findings (GeneRIF, showing 40)
- Processing of pro-atrial natriuretic peptide by corin in cardiac myocytes. (PMID:11884416)
- examination of hormones and diseases that upregulate its expression (review) (PMID:12102171)
- Induction of IkappaB: atrial natriuretic peptide as a regulator of the NF-kappaB pathway (PMID:12135603)
- expression of heart failure marker gene(ANF) are upregulated in the failing heart (PMID:12145475)
- intrapericardial ANP may reflect the peptide concentration in the myocardial interstitium and may represent a paracrine regulatory mechanism, which seems independent of ANP-induced putative antiischemic influences (PMID:12270761)
- plasma levels of adrenomedullin, ANP and brain natriuretic peptide (BNP)increased with aging; ANP and BNP increased in association with pulse pressure; possible relation between levels and age-related changes in cardiovascular system (PMID:12484513)
- results suggest that atrial natriuretic peptide can potentiate endothelial regeneration by cGMP-dependent protein kinase stimulation and subsequent Akt protein and extracellular signal-regulated kinase 1/2 activations (PMID:12505872)
- The ScaI ANP polymorphism may be associated with nonfatal myocardial infarction and the extent of CAD. (PMID:12514664)
- ANP may play a role in dendritic cell (DC)-mediated immune regulation: treatment of DCs with ANP plus lipopolysaccharide promotes differentiation of naive CD4+ T cells into a Th2 phenotype. (PMID:12794112)
- Pro-ANP plasma levels are independently and inversely related to anxiety. This might be part of a negative feedback loop limiting psychological distress and its adverse autonomic consequences in severe heart failure. (PMID:12883099)
- Plasma ANP concentrations were significantly higher in marathon runners than in controls and judo groups, and positively correlated with the left atrial dimension index, but negatively correlated with ejection fraction. (PMID:12890912)
- ANF mediates the inhibition of TNF-alpha-induced expression of MCP-1. (PMID:12960255)
- CRH administration induced sympathotonic effects which were antagonized by ANP (PMID:14698679)
- Atrial natriuretic peptide gene polymorphisms increase susceptibility for ischemic stroke. (PMID:15017020)
- In humans, in addition to catecholamines, ANP plays a noticeable role in the control of lipid mobilization. This pathway becomes of major importance when subjects are submitted to chronic treatment with a beta-blocker. (PMID:15033935)
- The 2238C allele of atrial natriuretic peptide may affect the course of nephropathy in inadequately controlled type 1 diabetic patients. (PMID:15111511)
- In hypertrophic cardiomyopathy, plasma BNP may reflect intraventricular pressure gradient and left ventricular diastolic dysfunction. Plasma ANP reflects left ventricular diastolic dysfunction. (PMID:15118286)
- Does not decrease ADH, aldosterone and corticosterone response to dehydration. Apparently modulates ADH, aldosterone and corticosterone responses to other stimuli in the dehydrated state. (PMID:15648549)
- Ligand- and retinoid X receptor-dependent, Vitamin D receptor-mediated suppression of human ANP gene promoter activity. (PMID:15837528)
- Polyhydramnios in fetuses with heart conditions might be explained by increased fetal diuresis secondary to increased ANP production (PMID:16113566)
- Plasma concentrations of ANF were higher in children with congenital heart defects with left ventricular volume overload compared with right ventricular volume overload or pressure overload. (PMID:16117728)
- Results suggest that atrial natriuretic factor is involved in the control of lipolysis during exercise and that it contributes to stimulation of lipolysis during repeated bouts of exercise. (PMID:16291573)
- The 664A allele of the Atrial Natriuretic Peptide(ANP) polymorphism is associated with lower levels of ApoA1 and HDL-C in Familial Hypercholesterolemia patients, but not with Coronary Artery Disease risk. (PMID:16721833)
- ANP/NPRA system significantly contributes to ventricular remodeling in human essential hypertension. (PMID:16875975)
- Both ANP and BNP expression were higher in heart failure than in control samples. (PMID:16962475)
- NPPA in patients with myocardial infarction may be a useful parameter to guide prescription of cardiac rehabilitation. (PMID:17292492)
- Nppa and Npr1 gene polymorphisms are not associated with normal-tension glaucoma, suggesting that this gene does not have an important role in the pathogenesis of optic neuropathy in this disease. (PMID:17460430)
- The ANP gene variant was associated with early blood pressure increase and predisposition to develop hypertension. (PMID:17525707)
- irculating ANF was strongly associated with glucose tolerance status in diabetic and nondiabetic patients in heart transplantation. (PMID:17580193)
- Tbx18 interacts with Gata4 and Nkx2-5 and competes Tbx5-mediated activation of the cardiac Natriuretic peptide precursor type a-promoter. Tbx18 down-regulates Tbx6-activated Delta-like 1 expression in the somitic mesoderm in vivo (PMID:17584735)
- the -A2843G polymorphism in the ANP gene promoter might be a genetic risk factor for the development of left ventricular hypertrophy in patients with hypertension (PMID:17672826)
- Atrial natriuretic hormone in the hypertensive subjects were lower in the Jordan Valley and lower in Irbid City than normotensives. (PMID:17693975)
- The ScaI polymorphism of the ANP gene might be an important additive genetic factor influencing neurohormonal activation and disease progression in severe HF. (PMID:17890443)
- ANP and corin are expressed at the mRNA level in human adipose tissue and preadipocytes (PMID:17890485)
- elevated ANP (atrial natriuretic peptide ) plasma levels are closely related to cardiac abnormalities in elderly subjects (PMID:17900714)
- Increased ANP in patients with idiopathic hypertension may indicate the coexistence of complications with types of left ventricular hypertrophy (LVH). High concentrations of BNP may specifically suggest concentric LVH. (PMID:17901852)
- human heart LIM promotes the specific expression of the ANF gene by co-operating with Nkx2.5 (PMID:17927564)
- Determined plasma NT-proANP levels in relation to severity of mitral valve regurgitation. (PMID:17943627)
- natriuretic peptide precursor A gene plays a significant role in blood pressure regulation and development of hypertension. (PMID:17984371)
- Increase in CD34-positive cells may be functionally correlated with the increase in ANP production in idiopathic dilated cardiomyopathies. (PMID:18092954)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | nppa | ENSDARG00000052960 |
| mus_musculus | Nppa | ENSMUSG00000041616 |
| rattus_norvegicus | Nppa | ENSRNOG00000008176 |
Paralogs (1): NPPB (ENSG00000120937)
Protein
Protein identifiers
Natriuretic peptides A — P01160 (reviewed: P01160)
Alternative names: Atrial natriuretic factor prohormone, Atrial natriuretic peptide prohormone, Atriopeptigen, Cardiodilatin, preproCDD-ANF
All UniProt accessions (2): B0ZBE8, P01160
UniProt curated annotations — full annotation on UniProt →
Function. Hormone that plays a key role in mediating cardio-renal homeostasis, and is involved in vascular remodeling and regulating energy metabolism. Acts by specifically binding and stimulating NPR1 to produce cGMP, which in turn activates effector proteins, such as PRKG1, that drive various biological responses. Regulates vasodilation, natriuresis, diuresis and aldosterone synthesis and is therefore essential for regulating blood pressure, controlling the extracellular fluid volume and maintaining the fluid-electrolyte balance. Also involved in inhibiting cardiac remodeling and cardiac hypertrophy by inducing cardiomyocyte apoptosis and attenuating the growth of cardiomyocytes and fibroblasts. Plays a role in female pregnancy by promoting trophoblast invasion and spiral artery remodeling in uterus, and thus prevents pregnancy-induced hypertension. In adipose tissue, acts in various cGMP- and PKG-dependent pathways to regulate lipid metabolism and energy homeostasis. This includes up-regulating lipid metabolism and mitochondrial oxygen utilization by activating the AMP-activated protein kinase (AMPK), and increasing energy expenditure by acting via MAPK11 to promote the UCP1-dependent thermogenesis of brown adipose tissue. Binds the clearance receptor NPR3 which removes the hormone from circulation. May have a role in cardio-renal homeostasis through regulation of natriuresis, diuresis, vasodilation, and inhibiting aldosterone synthesis. In vitro, promotes the production of cGMP and induces vasodilation. May promote natriuresis, at least in part, by enhancing prostaglandin E2 synthesis resulting in the inhibition of renal Na+-K+-ATPase. However reports on the involvement of this peptide in mammal blood volume and blood pressure homeostasis are conflicting; according to a report, in vivo it is not sufficient to activate cGMP and does not inhibit collecting duct transport nor effect diuresis and natriuresis. Appears to bind to specific receptors that are distinct from the receptors bound by atrial natriuretic peptide and vessel dilator. Possibly enhances protein excretion in urine by decreasing proximal tubular protein reabsorption. May have a role in cardio-renal homeostasis through regulation of natriuresis, diuresis, and vasodilation. In vitro, promotes the production of cGMP and induces vasodilation. May promote natriuresis, at least in part, by enhancing prostaglandin E2 synthesis resulting in the inhibition of renal Na+-K+-ATPase. However reports on the involvement of this peptide in mammal blood volume and blood pressure homeostasis are conflicting; according to a report it is not sufficient to activate cGMP and does not inhibit collecting duct transport nor effect diuresis and natriuresis. Appears to bind to specific receptors that are distinct from the receptors bound by the atrial natriuretic and long-acting natriuretic peptides. Possibly functions in protein excretion in urine by maintaining the integrity of the proximal tubules and enhancing protein excretion by decreasing proximal tubular protein reabsorption. May have a role in cardio-renal homeostasis through regulation of diuresis and inhibiting aldosterone synthesis. In vitro, promotes the production of cGMP and induces vasodilation. May promote natriuresis, at least in part, by enhancing prostaglandin E2 synthesis resulting in the inhibition of renal Na+-K+-ATPase. May have a role in potassium excretion but not sodium excretion (natriuresis). Possibly enhances protein excretion in urine by decreasing proximal tubular protein reabsorption. Hormone produced in the kidneys that appears to be important for maintaining cardio-renal homeostasis. Mediates vasodilation, natriuresis and diuresis primarily in the renal system, in order to maintain the extracellular fluid volume and control the fluid-electrolyte balance. Specifically binds and stimulates cGMP production by renal transmembrane receptors, likely NPR1. Urodilatin not ANP, may be the natriuretic peptide responsible for the regulation of sodium and water homeostasis in the kidney. May have a role in cardio-renal homeostasis through regulation of natriuresis and vasodilation. In vivo promotes natriuresis and in vitro, vasodilates renal artery strips. May have a role in cardio-renal homeostasis through regulation of natriuresis and vasodilation. In vivo promotes natriuresis and in vitro, vasodilates renal artery strips. May have a role in cardio-renal homeostasis through regulation of regulation of natriuresis and vasodilation. In vivo promotes natriuresis. In vitro, vasodilates intestinal smooth muscle but not smooth muscle strips. May have a role in cardio-renal homeostasis through regulation of natriuresis and vasodilation. In vivo promotes natriuresis. In vitro, selectively vasodilates intestinal and vascular smooth muscle strips. May have a role in cardio-renal homeostasis through regulation of natriuresis and vasodilation. In vivo promotes natriuresis. In vitro, selectively vasodilates intestinal smooth muscle but not vascular smooth muscle strips.
Subunit / interactions. Homodimer; disulfide-linked antiparallel dimer.
Subcellular location. Secreted Secreted Secreted Secreted Secreted. Perikaryon. Cell projection Secreted.
Tissue specificity. Detected in the kidney distal tubular cells (at protein level). Present in urine (at protein level). Detected in atrial and ventricular plasma samples, and in adipocytes (at protein level). Detected in urine in one study. However, was not detected in urine in another study. In the brain, predominantly expressed in the gray matter with very weak expression in the white matter (at protein level). Localizes to astrocyte-like structures throughout the white matter, and in the cerebral vessels detected in the leptomeningeal and parenchymal vessels, and endothelium and smooth muscle layers (at protein level). Relatively low levels of expression in the kidneys compared to urodilatin (at protein level).
Post-translational modifications. The precursor molecule is proteolytically cleaved by CORIN at Arg-123 to produce atrial natriuretic peptide. Undergoes further proteolytic cleavage by unknown proteases to give rise to long-acting natriuretic peptide, vessel dilator and kaliuretic peptide. Additional processing gives rise to the auriculin and atriopeptin peptides. In the kidneys, alternative processing by an unknown protease results in the peptide urodilatin. Cleavage by MME initiates degradation of the factor and thereby regulates its activity. Degraded by IDE (in vitro). During IDE degradation, the resulting products can temporarily stimulate NPR2 to produce cGMP, before the fragments are completely degraded and inactivated by IDE (in vitro). Degraded by IDE. Phosphorylation on Ser-129 decreases vasorelaxant activity.
Disease relevance. Atrial standstill 2 (ATRST2) [MIM:615745] A rare arrhythmia characterized by the absence of electrical and mechanical activity in the atria. Electrocardiographically, it is characterized by bradycardia, the absence of P waves, and a junctional narrow complex escape rhythm. The disease is caused by variants affecting the gene represented in this entry. Atrial fibrillation, familial, 6 (ATFB6) [MIM:612201] A familial form of atrial fibrillation, a common sustained cardiac rhythm disturbance. Atrial fibrillation is characterized by disorganized atrial electrical activity and ineffective atrial contraction promoting blood stasis in the atria and reduces ventricular filling. It can result in palpitations, syncope, thromboembolic stroke, and congestive heart failure. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the natriuretic peptide family.
RefSeq proteins (1): NP_006163* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000663 | Natr_peptide | Family |
| IPR002407 | Natriuretic_peptide_atrial | Family |
| IPR030480 | Natr_peptide_CS | Conserved_site |
| IPR050787 | Natriuretic_peptide | Family |
Pfam: PF00212
UniProt features (32 total): peptide 12, mutagenesis site 4, sequence variant 3, strand 3, region of interest 2, site 2, signal peptide 1, chain 1, modified residue 1, disulfide bond 1, sequence conflict 1, propeptide 1
Structure
Experimental structures (PDB)
13 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1YK0 | X-RAY DIFFRACTION | 2.4 |
| 7BRH | X-RAY DIFFRACTION | 2.45 |
| 7BRJ | X-RAY DIFFRACTION | 2.7 |
| 9DZF | ELECTRON MICROSCOPY | 2.7 |
| 9DZJ | ELECTRON MICROSCOPY | 2.7 |
| 7BRK | X-RAY DIFFRACTION | 2.85 |
| 9RBD | ELECTRON MICROSCOPY | 2.96 |
| 9DZH | ELECTRON MICROSCOPY | 3 |
| 3N57 | X-RAY DIFFRACTION | 3.03 |
| 8TG9 | ELECTRON MICROSCOPY | 3.08 |
| 9BCQ | ELECTRON MICROSCOPY | 3.1 |
| 9RBW | ELECTRON MICROSCOPY | 3.3 |
| 1ANP | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P01160-F1 | 64.11 | 0.12 |
Antibody-complex structures (SAbDab): 1 — 8TG9
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 123–124 (cleavage; by corin); 130–131 (cleavage; by mme)
Post-translational modifications (1): 129
Disulfide bonds (1): 130–146
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 123 | loss of cleavage by corin. |
| 124–129 | no effect on degradation of atrial natriuretic peptide by ide. |
| 124–126 | reduced degradation of atrial natriuretic peptide by ide; when associated with n-147–151-y del. |
| 147–151 | reduced degradation of atrial natriuretic peptide by ide; when associated with s-124–126-r del. |
Function
Pathways and Gene Ontology
Reactome pathways
9 pathways
| ID | Pathway |
|---|---|
| R-HSA-2032785 | YAP1- and WWTR1 (TAZ)-stimulated gene expression |
| R-HSA-5578768 | Physiological factors |
| R-HSA-977225 | Amyloid fiber formation |
| R-HSA-212436 | Generic Transcription Pathway |
| R-HSA-392499 | Metabolism of proteins |
| R-HSA-397014 | Muscle contraction |
| R-HSA-5576891 | Cardiac conduction |
| R-HSA-73857 | RNA Polymerase II Transcription |
| R-HSA-74160 | Gene expression (Transcription) |
MSigDB gene sets: 398 (showing top):
GOBP_POTASSIUM_ION_TRANSPORT, BIOCARTA_GCR_PATHWAY, GOBP_NEGATIVE_REGULATION_OF_MAP_KINASE_ACTIVITY, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, CAR_TNFRSF25, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOBP_REGULATION_OF_BLOOD_PRESSURE, GOBP_REGULATION_OF_ERBB_SIGNALING_PATHWAY, GOBP_RESPONSE_TO_MUSCLE_STRETCH, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_NEGATIVE_REGULATION_OF_KINASE_ACTIVITY, GOBP_CELLULAR_RESPONSE_TO_EXTERNAL_STIMULUS, GOBP_SODIUM_ION_TRANSMEMBRANE_TRANSPORT, GOBP_NEGATIVE_REGULATION_OF_ERBB_SIGNALING_PATHWAY
GO Biological Process (37): response to hypoxia (GO:0001666), negative regulation of systemic arterial blood pressure (GO:0003085), cardiac conduction system development (GO:0003161), aortic valve morphogenesis (GO:0003180), cGMP biosynthetic process (GO:0006182), protein folding (GO:0006457), receptor guanylyl cyclase signaling pathway (GO:0007168), neuropeptide signaling pathway (GO:0007218), female pregnancy (GO:0007565), regulation of blood pressure (GO:0008217), positive regulation of heart rate (GO:0010460), obsolete positive regulation of cGMP-mediated signaling (GO:0010753), cardiac muscle hypertrophy in response to stress (GO:0014898), obsolete cGMP-mediated signaling (GO:0019934), negative regulation of cell growth (GO:0030308), response to insulin (GO:0032868), response to muscle stretch (GO:0035994), sodium ion export across plasma membrane (GO:0036376), vasodilation (GO:0042311), negative regulation of JUN kinase activity (GO:0043508), regulation of atrial cardiac muscle cell membrane repolarization (GO:0060372), positive regulation of cardiac muscle contraction (GO:0060452), cell growth involved in cardiac muscle cell development (GO:0061049), cellular response to hydrogen peroxide (GO:0070301), cellular response to mechanical stimulus (GO:0071260), cellular response to glucose stimulus (GO:0071333), synaptic signaling via neuropeptide (GO:0099538), regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (GO:1902514), positive regulation of potassium ion export across plasma membrane (GO:1903766), negative regulation of collecting lymphatic vessel constriction (GO:1903815), cellular response to angiotensin (GO:1904385), response to 3-methylcholanthrene (GO:1904681), system process (GO:0003008), signal transduction (GO:0007165), regulation of vascular permeability (GO:0043114), negative regulation of blood pressure (GO:0045776), blood vessel diameter maintenance (GO:0097746)
GO Molecular Function (7): signaling receptor binding (GO:0005102), hormone activity (GO:0005179), neuropeptide hormone activity (GO:0005184), hormone receptor binding (GO:0051427), neuropeptide receptor binding (GO:0071855), protein binding (GO:0005515), guanylate cyclase activator activity (GO:0030250)
GO Cellular Component (10): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), cytoplasm (GO:0005737), brush border (GO:0005903), protein-containing complex (GO:0032991), mast cell granule (GO:0042629), cell projection (GO:0042995), perikaryon (GO:0043204), perinuclear region of cytoplasm (GO:0048471), glycinergic synapse (GO:0098690)
Reactome top-level categories
Rollup of top-6 pathways:
| Category | Pathways |
|---|---|
| Generic Transcription Pathway | 1 |
| Cardiac conduction | 1 |
| Metabolism of proteins | 1 |
| RNA Polymerase II Transcription | 1 |
| Muscle contraction | 1 |
| Gene expression (Transcription) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| response to stress | 1 |
| response to decreased oxygen levels | 1 |
| regulation of systemic arterial blood pressure | 1 |
| negative regulation of blood pressure | 1 |
| cardiac muscle tissue development | 1 |
| aortic valve development | 1 |
| heart valve morphogenesis | 1 |
| purine ribonucleotide biosynthetic process | 1 |
| cyclic nucleotide biosynthetic process | 1 |
| cGMP metabolic process | 1 |
| cellular process | 1 |
| protein maturation | 1 |
| enzyme-linked receptor protein signaling pathway | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| multi-organism reproductive process | 1 |
| multi-multicellular organism process | 1 |
| blood circulation | 1 |
| regulation of biological quality | 1 |
| regulation of heart rate | 1 |
| positive regulation of heart contraction | 1 |
| muscle hypertrophy in response to stress | 1 |
| cardiac muscle hypertrophy | 1 |
| cardiac muscle adaptation | 1 |
| regulation of cell growth | 1 |
| cell growth | 1 |
| negative regulation of growth | 1 |
| negative regulation of cellular process | 1 |
| response to peptide hormone | 1 |
| response to mechanical stimulus | 1 |
| sodium ion transmembrane transport | 1 |
| export across plasma membrane | 1 |
| blood vessel diameter maintenance | 1 |
| JUN kinase activity | 1 |
| negative regulation of MAP kinase activity | 1 |
| regulation of JUN kinase activity | 1 |
| negative regulation of JNK cascade | 1 |
| protein binding | 1 |
| receptor ligand activity | 1 |
| hormone activity | 1 |
Protein interactions and networks
STRING
2593 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| NPPA | NPR3 | P17342 | 999 |
| NPPA | NPR1 | P16066 | 999 |
| NPPA | NPR2 | P20594 | 995 |
| NPPA | NPPC | P23582 | 984 |
| NPPA | NPPB | P16860 | 969 |
| NPPA | AGT | P01019 | 948 |
| NPPA | REN | P00797 | 941 |
| NPPA | NKX2-5 | P52952 | 934 |
| NPPA | GATA4 | P43694 | 895 |
| NPPA | CORIN | Q9Y5Q5 | 871 |
| NPPA | ADM | P35318 | 858 |
| NPPA | MYH6 | P13533 | 838 |
| NPPA | ACE | P12821 | 836 |
| NPPA | MYH7 | P12883 | 834 |
| NPPA | TBX5 | Q99593 | 828 |
IntAct
21 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MAGEA12 | NPPA | psi-mi:“MI:0915”(physical association) | 0.720 |
| NPPA | MAGEA12 | psi-mi:“MI:0915”(physical association) | 0.720 |
| NPPA | UBQLN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| UBQLN1 | NPPA | psi-mi:“MI:0915”(physical association) | 0.560 |
| HSF2BP | NPPA | psi-mi:“MI:0915”(physical association) | 0.560 |
| NPPA | UBQLN2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NPPA | A2ML1 | psi-mi:“MI:0914”(association) | 0.530 |
| NPPA | VGF | psi-mi:“MI:0914”(association) | 0.530 |
| NPPA | HSF2BP | psi-mi:“MI:0915”(physical association) | 0.000 |
| NPPA | MAGEA12 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NPPA | UBQLN2 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NPPA | UBQLN4 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (87): NPPA (Two-hybrid), UBQLN1 (Two-hybrid), PM20D1 (Affinity Capture-MS), A2ML1 (Affinity Capture-MS), NUDT8 (Affinity Capture-MS), LCN2 (Affinity Capture-MS), OBSCN (Affinity Capture-MS), GDPD3 (Affinity Capture-MS), SMYD2 (Affinity Capture-MS), NDUFAF7 (Affinity Capture-MS), SDR9C7 (Affinity Capture-MS), NDUFAF5 (Affinity Capture-MS), ALOX15B (Affinity Capture-MS), PMPCA (Affinity Capture-MS), METAP1 (Affinity Capture-MS)
ESM2 similar proteins: B0VXV8, B8K1V9, D1MZV3, D5J9S0, D9IX97, O46540, O77559, P01021, P01142, P01143, P01160, P05125, P06296, P07499, P0C7P5, P0C7P6, P12272, P13085, P16860, P18104, P22858, P23582, P27596, P52211, P55206, P55207, P56283, P56469, P61312, P68515, P79799, P83228, P84715, P97297, Q09GK2, Q27J49, Q2PE51, Q2XXL8, Q61839, Q62949
Diamond homologs: O46540, O46541, P01160, P01161, P05125, P07499, P07500, P07501, P07634, P09196, P13204, P16859, P18144, P18908, P18909, P22642, P24259, P27104, P27596, P83962, P83964, Q805D7, Q805D8, Q805E9, Q9GLD0, Q9GLK4, B0VXV8, B3EWY2, B3EWY3, D1MZV3, P0CV87, P0DMD6, P13205, P16860, P18104, P23582, P40753, P55206, P55207, P56283
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| NPPA | up-regulates | NPR1 | binding |
| ANKRD1 | “down-regulates quantity by repression” | NPPA | “transcriptional regulation” |
| TBX5 | “up-regulates quantity by expression” | NPPA | “transcriptional regulation” |
| CAMTA1 | “up-regulates quantity by expression” | NPPA | “transcriptional regulation” |
| JARID2 | “down-regulates quantity by repression” | NPPA | “transcriptional regulation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
28 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 8 |
| Likely benign | 10 |
| Benign | 6 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 17788 | NM_006172.4(NPPA):c.456_*1del (p.Ter152TrpextTer?) | Pathogenic |
SpliceAI
169 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:11847442:T:C | acceptor_gain | 1.0000 |
| 1:11846015:C:CC | acceptor_gain | 0.9900 |
| 1:11847107:TCTTA:T | donor_loss | 0.9900 |
| 1:11847109:TTA:T | donor_loss | 0.9900 |
| 1:11847110:TA:T | donor_loss | 0.9900 |
| 1:11847111:A:AC | donor_gain | 0.9900 |
| 1:11847111:A:AT | donor_loss | 0.9900 |
| 1:11847111:AC:A | donor_gain | 0.9900 |
| 1:11847112:C:CC | donor_gain | 0.9900 |
| 1:11847112:CC:C | donor_gain | 0.9900 |
| 1:11847440:C:CC | acceptor_gain | 0.9900 |
| 1:11847441:T:C | acceptor_gain | 0.9900 |
| 1:11847442:T:TC | acceptor_gain | 0.9900 |
| 1:11847106:CTCTT:C | donor_loss | 0.9800 |
| 1:11847438:TT:T | acceptor_gain | 0.9800 |
| 1:11847550:T:A | donor_gain | 0.9800 |
| 1:11847556:CCCTA:C | donor_loss | 0.9800 |
| 1:11847557:CCTA:C | donor_loss | 0.9800 |
| 1:11847558:CTAC:C | donor_loss | 0.9800 |
| 1:11847559:TACCT:T | donor_loss | 0.9800 |
| 1:11847560:A:AG | donor_loss | 0.9800 |
| 1:11847561:C:A | donor_loss | 0.9800 |
| 1:11846012:GTA:G | acceptor_gain | 0.9700 |
| 1:11846013:TA:T | acceptor_gain | 0.9700 |
| 1:11847436:AATT:A | acceptor_gain | 0.9700 |
| 1:11847437:ATT:A | acceptor_gain | 0.9700 |
| 1:11847439:TC:T | acceptor_loss | 0.9700 |
| 1:11847440:C:A | acceptor_loss | 0.9700 |
| 1:11846010:CAGTA:C | acceptor_gain | 0.9600 |
| 1:11846014:AC:A | acceptor_loss | 0.9600 |
AlphaMissense
980 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:11847170:G:C | F131L | 0.994 |
| 1:11847170:G:T | F131L | 0.994 |
| 1:11847172:A:G | F131L | 0.994 |
| 1:11847126:C:G | C146S | 0.993 |
| 1:11847127:A:T | C146S | 0.993 |
| 1:11847171:A:C | F131C | 0.993 |
| 1:11847175:A:G | C130R | 0.992 |
| 1:11847126:C:T | C146Y | 0.989 |
| 1:11847127:A:G | C146R | 0.989 |
| 1:11847174:C:T | C130Y | 0.989 |
| 1:11847174:C:G | C130S | 0.988 |
| 1:11847175:A:T | C130S | 0.988 |
| 1:11847137:G:C | S142R | 0.987 |
| 1:11847137:G:T | S142R | 0.987 |
| 1:11847139:T:G | S142R | 0.987 |
| 1:11847173:G:C | C130W | 0.986 |
| 1:11847174:C:A | C130F | 0.986 |
| 1:11847126:C:A | C146F | 0.985 |
| 1:11847168:C:T | G132E | 0.984 |
| 1:11847161:C:A | R134S | 0.983 |
| 1:11847161:C:G | R134S | 0.983 |
| 1:11847150:A:T | I138N | 0.982 |
| 1:11847156:T:A | D136V | 0.982 |
| 1:11847157:C:G | D136H | 0.981 |
| 1:11847125:A:C | C146W | 0.979 |
| 1:11847162:C:G | R134T | 0.979 |
| 1:11847152:C:A | R137S | 0.978 |
| 1:11847152:C:G | R137S | 0.978 |
| 1:11847162:C:A | R134M | 0.978 |
| 1:11847150:A:C | I138S | 0.977 |
dbSNP variants (sampled 300 via entrez): RS1000287820 (1:11849287 T>A,C), RS1000613938 (1:11848301 C>T), RS1000643538 (1:11848560 A>G), RS1001728343 (1:11848593 C>T), RS1002898170 (1:11848261 G>A,C), RS1003357016 (1:11847930 G>A,T), RS1003632 (1:11849352 C>T), RS1003736245 (1:11846460 A>G), RS1004143376 (1:11847776 C>G,T), RS1004223776 (1:11849413 A>C), RS1004475971 (1:11848806 C>T), RS1004508860 (1:11849053 C>G), RS1005191711 (1:11847108 C>G), RS1005449974 (1:11846139 C>G,T), RS1005677533 (1:11848540 A>G)
Disease associations
OMIM: gene MIM:108780 | disease phenotypes: MIM:612201, MIM:615745
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| atrial fibrillation, familial, 6 | Moderate | Autosomal dominant |
| atrial standstill | Supportive | Autosomal dominant |
| familial atrial fibrillation | Supportive | Autosomal dominant |
| atrial standstill 2 | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| dilated cardiomyopathy | No Known Disease Relationship | AR |
Mondo (4): atrial fibrillation, familial, 6 (MONDO:0012816), atrial standstill 2 (MONDO:0014329), atrial standstill (MONDO:0015281), familial atrial fibrillation (MONDO:0018054)
Orphanet (1): Isolated atrial standstill (Orphanet:1344)
HPO phenotypes
52 total (30 of 52 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001260 | Dysarthria |
| HP:0001279 | Syncope |
| HP:0001297 | Stroke |
| HP:0001371 | Flexion contracture |
| HP:0001627 | Abnormal heart morphology |
| HP:0001635 | Congestive heart failure |
| HP:0001638 | Cardiomyopathy |
| HP:0001658 | Myocardial infarction |
| HP:0001662 | Bradycardia |
| HP:0001692 | Atrial arrhythmia |
| HP:0001712 | Left ventricular hypertrophy |
| HP:0001727 | Thromboembolic stroke |
| HP:0001907 | Thromboembolism |
| HP:0001962 | Palpitations |
| HP:0002018 | Nausea |
| HP:0002094 | Dyspnea |
| HP:0002140 | Ischemic stroke |
| HP:0002301 | Hemiplegia |
| HP:0002315 | Headache |
| HP:0002321 | Vertigo |
| HP:0002381 | Aphasia |
| HP:0002617 | Vascular dilatation |
| HP:0003202 | Skeletal muscle atrophy |
| HP:0003238 | Hyperpepsinogenemia I |
| HP:0003546 | Exercise intolerance |
| HP:0003560 | Muscular dystrophy |
| HP:0003596 | Middle age onset |
| HP:0004756 | Ventricular tachycardia |
GWAS associations
39 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000395_2 | Systolic blood pressure | 2.000000e-13 |
| GCST000445_2 | Atrial fibrillation | 6.000000e-07 |
| GCST004923_1 | Tuberculosis | 1.000000e-11 |
| GCST005207_1 | Midregional pro atrial natriuretic peptide levels | 4.000000e-13 |
| GCST005207_2 | Midregional pro atrial natriuretic peptide levels | 3.000000e-09 |
| GCST006190_19 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 6.000000e-16 |
| GCST006190_20 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 1.000000e-18 |
| GCST006190_21 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 7.000000e-19 |
| GCST006190_26 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-17 |
| GCST006190_27 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 5.000000e-21 |
| GCST006190_28 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-18 |
| GCST006190_41 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 6.000000e-13 |
| GCST006190_67 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 3.000000e-11 |
| GCST006192_1 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 9.000000e-20 |
| GCST006192_14 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 3.000000e-14 |
| GCST006192_16 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-29 |
| GCST006192_17 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 3.000000e-21 |
| GCST006192_2 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 1.000000e-32 |
| GCST006192_28 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 5.000000e-13 |
| GCST006192_3 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 2.000000e-20 |
| GCST006192_88 | Systolic blood pressure x smoking status (ever vs never) interaction (2df test) | 6.000000e-18 |
| GCST006193_11 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 5.000000e-16 |
| GCST006193_12 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 1.000000e-22 |
| GCST006193_24 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 1.000000e-12 |
| GCST006193_50 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 6.000000e-16 |
| GCST006193_51 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 3.000000e-20 |
| GCST006193_52 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 7.000000e-19 |
| GCST006193_65 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 2.000000e-11 |
| GCST006193_9 | Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 4.000000e-19 |
| GCST006195_22 | Systolic blood pressure x smoking status (current vs non-current) interaction (2df test) | 4.000000e-31 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0006335 | systolic blood pressure |
| EFO:0008468 | midregional pro atrial natriuretic peptide measurement |
| EFO:0006336 | diastolic blood pressure |
| EFO:0006527 | smoking status measurement |
| EFO:0005763 | pulse pressure measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C567400 | Atrial Fibrillation, Familial, 6 (supp.) | |
| C563984 | Atrial Standstill (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1293193 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 3,529 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL42583 | SAMPATRILAT | 2 | 3,529 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs5065 | Efficacy | 3 | amlodipine;chlorthalidone | Cardiovascular Disease;Coronary Disease;Stroke |
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs5063 | NPPA, NPPA-AS1 | 3 | 1.75 | 1 | bumetanide;furosemide;torasemide |
| rs5065 | CLCN6, NPPA, NPPA-AS1 | 3 | 2.00 | 1 | amlodipine;chlorthalidone |
ChEMBL bioactivities
11 potent at pChembl≥5 of 11 total, top 11 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.82 | IC50 | 1.5 | nM | CHEMBL1778526 |
| 8.47 | IC50 | 3.4 | nM | SAMPATRILAT |
| 7.60 | IC50 | 25 | nM | CHEMBL1778529 |
| 7.24 | IC50 | 58 | nM | CHEMBL1778536 |
| 7.12 | IC50 | 75 | nM | CHEMBL1778528 |
| 7.09 | IC50 | 82 | nM | CHEMBL1778530 |
| 6.89 | IC50 | 130 | nM | CHEMBL1778527 |
| 6.89 | IC50 | 130 | nM | CHEMBL1778531 |
| 6.71 | IC50 | 195 | nM | CHEMBL1778534 |
| 6.68 | IC50 | 210 | nM | CHEMBL1778533 |
| 6.57 | IC50 | 270 | nM | CHEMBL1778532 |
PubChem BioAssay actives
11 with measured affinity, of 15 total; 11 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S)-2-[[(2S)-1-[[(1S)-1-carboxy-2-(4-phenylphenyl)ethyl]amino]-5-methyl-1-oxohexan-2-yl]amino]-4-phenylbutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0015 | uM |
| (2S)-2-[[[(2S)-6-amino-2-(methanesulfonamido)hexanoyl]amino]methyl]-3-[1-[[(1S)-1-carboxy-2-(4-hydroxyphenyl)ethyl]carbamoyl]cyclopentyl]propanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0034 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(4-phenyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]pentanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0250 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(3-phenyl-1,2,4-oxadiazol-5-yl)ethyl]carbamoyl]cyclopentyl]amino]-4-methoxybutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0580 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-[4-(2-methylpropyl)-1,3-oxazol-2-yl]ethyl]carbamoyl]cyclopentyl]amino]pentanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0750 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(5-phenyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]pentanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.0820 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(4-ethyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]pentanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.1300 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(4-phenyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]-4-methoxybutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.1300 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-[5-(4-chlorophenyl)-1,3-oxazol-2-yl]ethyl]carbamoyl]cyclopentyl]amino]-4-methoxybutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.1950 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(4-methyl-5-phenyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]-4-methoxybutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.2100 | uM |
| (2S)-2-[[1-[[(1S)-1-carboxy-2-(5-phenyl-1,3-oxazol-2-yl)ethyl]carbamoyl]cyclopentyl]amino]-4-methoxybutanoic acid | 598053: Inhibition of atrial natriuretic peptide | ic50 | 0.2700 | uM |
CTD chemical–gene interactions
57 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Doxorubicin | increases expression | 4 |
| Hydrocortisone | increases expression, decreases secretion | 3 |
| Resveratrol | affects cotreatment, decreases expression | 2 |
| Aldosterone | decreases secretion | 2 |
| Spironolactone | decreases expression | 2 |
| Verapamil | affects cotreatment, affects secretion, increases expression | 2 |
| MYK-461 | increases expression, decreases reaction | 1 |
| bisphenol F | increases expression | 1 |
| aminomethylphosphonic acid (AMPA) | decreases expression | 1 |
| bisphenol A | increases expression | 1 |
| manganese chloride | decreases expression | 1 |
| 15-hydroxy-5,8,11,13-eicosatetraenoic acid | increases expression | 1 |
| dan-shen root extract | increases expression, decreases reaction | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| CHOP protocol | increases expression | 1 |
| BAEC protocol | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 1,25-dihydroxyvitamin D | decreases expression | 1 |
| omapatrilat | increases expression | 1 |
| tricarbonyldichlororuthenium (II) dimer | decreases reaction, increases expression | 1 |
| jinfukang | increases expression | 1 |
| Carvedilol | decreases expression | 1 |
| Fulvestrant | decreases reaction, increases expression | 1 |
| Irbesartan | increases expression | 1 |
| Alprostadil | decreases expression | 1 |
| Angiotensin-Converting Enzyme Inhibitors | decreases expression | 1 |
| Atenolol | decreases expression | 1 |
| Atrazine | decreases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Cocaine | increases expression | 1 |
ChEMBL screening assays
5 unique, capped per target: 5 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1291041 | Binding | Displacement of [125I]-ANF from atrial natriuretic factor receptor at 1 to 3 uM | Conformationally constrained NR2B selective NMDA receptor antagonists derived from ifenprodil: Synthesis and biological evaluation of tetrahydro-3-benzazepine-1,7-diols. — Bioorg Med Chem |
Clinical trials (associated diseases)
2 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04075994 | Not specified | COMPLETED | Atrial Fibrillation Health Literacy and Information Technology Trial |
| NCT04076020 | Not specified | COMPLETED | Atrial Fibrillation Health Literacy and Information Technology Trial in Rural Pennsylvania Counties |
Related Atlas pages
- Associated diseases: atrial fibrillation, familial, 6, atrial standstill 2, atrial standstill, familial atrial fibrillation, dilated cardiomyopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): atrial fibrillation, familial, 6, atrial standstill, atrial standstill 2, familial atrial fibrillation, tuberculosis