NPY2R-AS1

Summary

NPY2R-AS1 (NPY2R antisense RNA 1, HGNC:55549) is a long non-coding RNA gene on chromosome 4q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55549
Approved symbol	NPY2R-AS1
Name	NPY2R antisense RNA 1
Location	4q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250538
Ensembl biotype	lncRNA
Entrez	107986321
RNAcentral	URS0002A70F1D — lncRNA, 1691 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000508687, ENST00000511017, ENST00000727157, ENST00000727158, ENST00000727159, ENST00000727160, ENST00000727161, ENST00000727162, ENST00000727163, ENST00000727164, ENST00000727165, ENST00000727166

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508687 — 3 exons

Exon	Start	End
ENSE00002019397	155208025	155208176
ENSE00004052427	155207166	155207815
ENSE00004052430	155208962	155209152

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 74.44.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	74.44	gold quality
right ovary	UBERON:0002118	60.00	gold quality
nucleus accumbens	UBERON:0001882	58.84	gold quality
amygdala	UBERON:0001876	58.72	gold quality
ganglionic eminence	UBERON:0004023	58.45	gold quality
primary visual cortex	UBERON:0002436	58.16	gold quality
prefrontal cortex	UBERON:0000451	58.07	gold quality
descending thoracic aorta	UBERON:0002345	57.52	gold quality
hypothalamus	UBERON:0001898	57.16	gold quality
thoracic mammary gland	UBERON:0005200	55.82	gold quality
Ammon’s horn	UBERON:0001954	55.70	gold quality
thoracic aorta	UBERON:0001515	54.91	gold quality
ascending aorta	UBERON:0001496	54.55	gold quality
monocyte	CL:0000576	54.11	gold quality
frontal cortex	UBERON:0001870	53.18	gold quality
superior frontal gyrus	UBERON:0002661	53.03	gold quality
brain	UBERON:0000955	52.39	gold quality
cerebral cortex	UBERON:0000956	51.86	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	51.54	gold quality
substantia nigra	UBERON:0002038	51.27	gold quality
right coronary artery	UBERON:0001625	50.67	gold quality
smooth muscle tissue	UBERON:0001135	50.52	gold quality
left coronary artery	UBERON:0001626	50.44	gold quality
saliva-secreting gland	UBERON:0001044	50.24	gold quality
minor salivary gland	UBERON:0001830	50.23	gold quality
putamen	UBERON:0001874	49.76	gold quality
tibial artery	UBERON:0007610	49.62	gold quality
popliteal artery	UBERON:0002250	49.56	gold quality
gall bladder	UBERON:0002110	49.48	gold quality
vagina	UBERON:0000996	49.47	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.