NRG4
gene geneOn this page
Also known as HRG4
Summary
NRG4 (neuregulin 4, HGNC:29862) is a protein-coding gene on chromosome 15q24.2, encoding Pro-neuregulin-4, membrane-bound isoform (Q8WWG1). Low affinity ligand for the ERBB4 tyrosine kinase receptor.
The neuregulins, including NRG4, activate type-1 growth factor receptors (see EGFR; MIM 131550) to initiating cell-to-cell signaling through tyrosine phosphorylation (Harari et al., 1999 [PubMed 10348342]).
Source: NCBI Gene 145957 — RefSeq curated summary.
At a glance
- GWAS associations: 30
- Clinical variants (ClinVar): 21 total
- MANE Select transcript:
NM_138573
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29862 |
| Approved symbol | NRG4 |
| Name | neuregulin 4 |
| Location | 15q24.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HRG4 |
| Ensembl gene | ENSG00000169752 |
| Ensembl biotype | protein_coding |
| OMIM | 610894 |
| Entrez | 145957 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 10 nonsense_mediated_decay, 4 protein_coding_CDS_not_defined, 3 protein_coding
ENST00000394907, ENST00000461391, ENST00000472094, ENST00000498750, ENST00000562114, ENST00000563204, ENST00000563582, ENST00000563910, ENST00000565661, ENST00000566417, ENST00000567126, ENST00000567467, ENST00000567936, ENST00000568073, ENST00000568203, ENST00000569343, ENST00000855803
RefSeq mRNA: 1 — MANE Select: NM_138573
NM_138573
CCDS: CCDS10288
Canonical transcript exons
ENST00000394907 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001387413 | 76009200 | 76009293 |
| ENSE00001519968 | 76012319 | 76012424 |
| ENSE00001766554 | 75940936 | 75943654 |
| ENSE00002190732 | 76011221 | 76011286 |
| ENSE00003538901 | 75961828 | 75961974 |
| ENSE00003786523 | 75955932 | 75956011 |
Expression profiles
Bgee: expression breadth ubiquitous, 164 present calls, max score 92.66.
FANTOM5 (CAGE): breadth broad, TPM avg 0.9532 / max 58.3196, expressed in 244 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 151006 | 0.4860 | 119 |
| 151008 | 0.2447 | 83 |
| 151007 | 0.1846 | 41 |
| 151005 | 0.0379 | 20 |
Top tissues by expression
247 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| body of pancreas | UBERON:0001150 | 92.66 | gold quality |
| right uterine tube | UBERON:0001302 | 92.20 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 90.17 | gold quality |
| cerebellar cortex | UBERON:0002129 | 89.92 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 89.56 | gold quality |
| cerebellum | UBERON:0002037 | 87.58 | gold quality |
| pancreas | UBERON:0001264 | 85.13 | gold quality |
| adrenal tissue | UBERON:0018303 | 83.62 | gold quality |
| secondary oocyte | CL:0000655 | 83.24 | gold quality |
| left testis | UBERON:0004533 | 82.78 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 82.62 | gold quality |
| right testis | UBERON:0004534 | 82.41 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 81.90 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 81.78 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 79.72 | gold quality |
| muscle of leg | UBERON:0001383 | 79.58 | gold quality |
| testis | UBERON:0000473 | 79.29 | gold quality |
| gastrocnemius | UBERON:0001388 | 78.66 | gold quality |
| calcaneal tendon | UBERON:0003701 | 78.41 | gold quality |
| right adrenal gland | UBERON:0001233 | 76.46 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 75.89 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 75.63 | gold quality |
| right frontal lobe | UBERON:0002810 | 75.10 | gold quality |
| islet of Langerhans | UBERON:0000006 | 75.02 | gold quality |
| hypothalamus | UBERON:0001898 | 74.72 | gold quality |
| body of stomach | UBERON:0001161 | 74.18 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 73.68 | gold quality |
| stomach | UBERON:0000945 | 73.03 | gold quality |
| left adrenal gland | UBERON:0001234 | 72.76 | gold quality |
| adenohypophysis | UBERON:0002196 | 72.70 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.58 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
129 targeting NRG4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-433-3P | 99.98 | 69.37 | 1203 |
| HSA-MIR-32-5P | 99.98 | 75.21 | 1964 |
| HSA-MIR-92A-3P | 99.98 | 75.21 | 1960 |
| HSA-MIR-92B-3P | 99.98 | 75.25 | 1955 |
| HSA-MIR-25-3P | 99.98 | 74.60 | 1817 |
| HSA-MIR-363-3P | 99.98 | 74.72 | 1821 |
| HSA-MIR-367-3P | 99.98 | 74.83 | 1819 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-4666A-3P | 99.96 | 71.71 | 3434 |
| HSA-MIR-559 | 99.95 | 72.28 | 3609 |
| HSA-MIR-548AB | 99.95 | 71.31 | 3488 |
| HSA-MIR-548A-5P | 99.94 | 71.27 | 3482 |
| HSA-MIR-548AD-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548AE-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548AK | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AM-5P | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AP-5P | 99.94 | 71.14 | 3489 |
| HSA-MIR-548AQ-5P | 99.94 | 71.34 | 3426 |
| HSA-MIR-548AR-5P | 99.94 | 71.28 | 3515 |
| HSA-MIR-548AS-5P | 99.94 | 71.22 | 3482 |
| HSA-MIR-548AU-5P | 99.94 | 71.24 | 3488 |
| HSA-MIR-548AY-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548B-5P | 99.94 | 71.23 | 3502 |
| HSA-MIR-548BB-5P | 99.94 | 71.27 | 3509 |
Literature-anchored findings (GeneRIF, showing 27)
- Neuregulin-4 expression is downregulated during urinary bladder cancer progression (PMID:15583696)
- NRG4 overexpression is associated with advanced-stage prostate cancer (PMID:17545517)
- describes a novel splice variant of the NRG4 gene, NRG4A2, which encodes a C-terminal region containing a predicted type I PDZ-binding peptide (PMID:17684490)
- NRG4 was positive in almost all breast cancers studied. (PMID:17962208)
- The recombinant neuregulin 4 induced the tyrosine phosphorylation of HER4. (PMID:21805036)
- Pharmacological inhibition of PI3K/Akt signaling reversed the anti-apoptotic effects of NRG4, confirming the role of this cascade in NRG4-induced cell survival (PMID:23033483)
- NRG4 and its receptor ErbB4 are present in human breast milk and developing human intestine, respectively. Thus, NRG4-ErbB4 signaling may be a novel pathway for therapeutic intervention or prevention in NEC. (PMID:25216938)
- results establish Nrg4 as a brown fat-enriched endocrine factor with therapeutic potential for the treatment of obesity-associated disorders, including type 2 diabetes and nonalcoholic fatty liver disease (NAFLD). (PMID:25401691)
- Nrg4 might have a protective role in the development of Non-alcoholic fatty liver disease (NAFLD). (PMID:26476959)
- High serum Nrg4 levels are associated with type 2 diabetes mellitus. (PMID:27329015)
- circulating Nrg4 concentrations are inversely associated with subclinical atherosclerosis in obese adults; circulating Nrg4 might play a role in identifying patients at high risk for cardiovascular disease (PMID:27819316)
- The circulating Nrg4 level is elevated in the prediabetic and diabetic patients compared to control and is an independent risk factor associated with diabetes. (PMID:27862843)
- Serum NRG4 values were significantly elevated in the Gestational Diabetes Mellitus (GDM) group compared to the control group and is associated with metabolic parameters of GDM. (PMID:29282998)
- Nrg4 is highly and preferentially expressed in healthy adipocytes, while its expression was substantially reduced in obesity. Nrg4 activated endothelial angiogenic functions and angiogenesis both in vitro and in vivo. (PMID:29902456)
- Nrg4 has a role in maintaining systemic metabolic homeostasis at least partially through enhancing adipose tissue angiogenesis (PMID:30195497)
- These findings together suggested that circulating Nrg4 levels were reduced in diabetic peripheral neuropathy patients and Nrg4 may be a novel adipokine associated with inflammation, oxidative stress, and long-term glycemic control in nT2DM patients. (PMID:30322810)
- Study reported for the first time that circulating Nrg4 concentrations were significantly reduced in patients with coronary artery disease (CAD) and Nrg4 levels were lower in the patients with a higher SYNTAX score. These findings indicated that Nrg4 levels were inversely associated with the presence and severity of CAD. (PMID:30393265)
- Median serum NRG4 was significantly lower in patients with end-stage kidney disease. (PMID:31153139)
- Study findings suggested circulating NRG4 may play a role in in the development of diabetes mellitus in cross-sectional studies and circulating NRG4 might be associated with imbalance in glucose metabolism and obesity.[meta-analysis] (PMID:31815951)
- Nrg-4 levels may be a good predictor of early detection of one or more diabetic microvascular complicationss (PMID:31999832)
- Negative Correlation between Neuregulin-4 and IL-9 Serum Levels in Patients with Coronary Artery Disease. (PMID:33463482)
- Is there a role for neuregulin 4 in human nonalcoholic fatty liver disease? (PMID:33989346)
- Serum neuregulin 4 (NRG-4) level and non-alcoholic fatty liver disease (NAFLD): A case-control study. (PMID:34159710)
- Mutations of NRG4 Contribute to the Pathogenesis of Nonalcoholic Fatty Liver Disease and Related Metabolic Disorders. (PMID:34261740)
- Neuregulin 4 (NRG4) - the hormone with clinical significance in gestational diabetes mellitus. (PMID:35603674)
- NGR4 and ERBB4 as Promising Diagnostic and Therapeutic Targets for Metabolic Disorders. (PMID:37369570)
- Neuregulin 4 (Nrg4) cooperates with melatonin to regulate the PRL expression via ErbB4/Erk signaling pathway as a potential prolactin (PRL) regulator. (PMID:38465779)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Nrg4 | ENSMUSG00000032311 |
| rattus_norvegicus | Nrg4 | ENSRNOG00000015149 |
Paralogs (3): NRG1 (ENSG00000157168), NRG2 (ENSG00000158458), NRG3 (ENSG00000185737)
Protein
Protein identifiers
Pro-neuregulin-4, membrane-bound isoform — Q8WWG1 (reviewed: Q8WWG1)
All UniProt accessions (5): E9PJI7, H3BP63, Q0P6N6, Q7Z663, Q8WWG1
UniProt curated annotations — full annotation on UniProt →
Function. Low affinity ligand for the ERBB4 tyrosine kinase receptor. Concomitantly recruits ERBB1 and ERBB2 coreceptors, resulting in ligand-stimulated tyrosine phosphorylation and activation of the ERBB receptors. Does not bind to the ERBB1, ERBB2 and ERBB3 receptors.
Subunit / interactions. Interacts with ERBB4.
Subcellular location. Cell membrane Secreted.
Post-translational modifications. Proteolytic cleavage close to the plasma membrane on the external face leads to the release of the soluble growth factor form. Extensive glycosylation precedes the proteolytic cleavage.
Domain organisation. The cytoplasmic domain may be involved in the regulation of trafficking and proteolytic processing. Regulation of the proteolytic processing involves initial intracellular domain dimerization. ERBB receptor binding is elicited entirely by the EGF-like domain.
Similarity. Belongs to the neuregulin family.
RefSeq proteins (1): NP_612640* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000742 | EGF | Domain |
Pfam: PF00008
UniProt features (10 total): disulfide bond 3, chain 2, topological domain 2, transmembrane region 1, domain 1, glycosylation site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8WWG1-F1 | 77.77 | 0.22 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (3): 9–23, 17–34, 36–45
Glycosylation sites (1): 39
Function
Pathways and Gene Ontology
Reactome pathways
17 pathways
| ID | Pathway |
|---|---|
| R-HSA-1227986 | Signaling by ERBB2 |
| R-HSA-1236394 | Signaling by ERBB4 |
| R-HSA-1250196 | SHC1 events in ERBB2 signaling |
| R-HSA-1250342 | PI3K events in ERBB4 signaling |
| R-HSA-1250347 | SHC1 events in ERBB4 signaling |
| R-HSA-1251985 | Nuclear signaling by ERBB4 |
| R-HSA-1257604 | PIP3 activates AKT signaling |
| R-HSA-1963640 | GRB2 events in ERBB2 signaling |
| R-HSA-1963642 | PI3K events in ERBB2 signaling |
| R-HSA-2219530 | Constitutive Signaling by Aberrant PI3K in Cancer |
| R-HSA-5673001 | RAF/MAP kinase cascade |
| R-HSA-6785631 | ERBB2 Regulates Cell Motility |
| R-HSA-6811558 | PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling |
| R-HSA-8847993 | ERBB2 Activates PTK6 Signaling |
| R-HSA-8863795 | Downregulation of ERBB2 signaling |
| R-HSA-9664565 | Signaling by ERBB2 KD Mutants |
| R-HSA-9665686 | Signaling by ERBB2 TMD/JMD mutants |
MSigDB gene sets: 140 (showing top):
LINDGREN_BLADDER_CANCER_CLUSTER_3_DN, GOMF_GROWTH_FACTOR_ACTIVITY, KEGG_ERBB_SIGNALING_PATHWAY, GOBP_ERBB_SIGNALING_PATHWAY, PID_ERBB4_PATHWAY, POU3F2_02, GOMF_SIGNALING_RECEPTOR_BINDING, GOBP_CELL_SURFACE_RECEPTOR_PROTEIN_TYROSINE_KINASE_SIGNALING_PATHWAY, GEORGES_TARGETS_OF_MIR192_AND_MIR215, TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_6HR_UP, GOMF_SIGNALING_RECEPTOR_REGULATOR_ACTIVITY, MIKKELSEN_MEF_ICP_WITH_H3K27ME3, PID_ERBB_NETWORK_PATHWAY, OHGUCHI_LIVER_HNF4A_TARGETS_UP, CHYLA_CBFA2T3_TARGETS_UP
GO Biological Process (2): ERBB4-ERBB4 signaling pathway (GO:0038138), signal transduction (GO:0007165)
GO Molecular Function (3): growth factor activity (GO:0008083), receptor ligand activity (GO:0048018), protein binding (GO:0005515)
GO Cellular Component (4): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Signaling by ERBB2 | 6 |
| Signaling by ERBB4 | 3 |
| Signaling by Receptor Tyrosine Kinases | 2 |
| Signaling by ERBB2 in Cancer | 2 |
| Intracellular signaling by second messengers | 1 |
| PI3K/AKT Signaling in Cancer | 1 |
| MAPK1/MAPK3 signaling | 1 |
| Negative regulation of the PI3K/AKT network | 1 |
| Signaling by PTK6 | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| ERBB4 signaling pathway | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| receptor ligand activity | 1 |
| signaling receptor binding | 1 |
| signal transduction | 1 |
| signaling receptor activator activity | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
Protein interactions and networks
STRING
626 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| NRG4 | ERBB4 | Q15303 | 998 |
| NRG4 | NRG2 | O14511 | 973 |
| NRG4 | ERBB3 | P21860 | 968 |
| NRG4 | NRG3 | P56975 | 945 |
| NRG4 | NRG1 | P98202 | 892 |
| NRG4 | EGFR | P00533 | 886 |
| NRG4 | ERBB2 | P04626 | 776 |
| NRG4 | AREG | P15514 | 725 |
| NRG4 | EGF | P01133 | 684 |
| NRG4 | PVALB | P20472 | 652 |
| NRG4 | BTC | P35070 | 644 |
| NRG4 | EPGN | Q6UW88 | 613 |
| NRG4 | EREG | O14944 | 586 |
| NRG4 | FGF21 | Q9NSA1 | 582 |
| NRG4 | UCP1 | P25874 | 553 |
IntAct
18 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| FATE1 | NRG4 | psi-mi:“MI:0915”(physical association) | 0.780 |
| NRG4 | FATE1 | psi-mi:“MI:0915”(physical association) | 0.780 |
| NRG4 | ERGIC3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| LHFPL5 | NRG4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CISD2 | NRG4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| NRG4 | CREB3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| NRG4 | FATE1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NRG4 | ERGIC3 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NRG4 | LHFPL5 | psi-mi:“MI:0915”(physical association) | 0.000 |
| NRG4 | CISD2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (8): NRG4 (Two-hybrid), NRG4 (Two-hybrid), FATE1 (Two-hybrid), NRG4 (Two-hybrid), NRG4 (Two-hybrid), NRG4 (Two-hybrid), LHFPL5 (Two-hybrid), NRG4 (Affinity Capture-RNA)
ESM2 similar proteins: D5K8A9, E7FEC4, O14944, O70534, O75129, O76095, O77049, O88823, O88824, O95727, P04441, P22934, P25118, P30931, P35070, P43303, P80370, Q02092, Q05928, Q09163, Q13145, Q149L7, Q3SXY7, Q5BVD1, Q60943, Q61521, Q6P9G4, Q7T2L7, Q80Z10, Q80ZD7, Q80ZD8, Q8BGE4, Q8C351, Q8C5C9, Q8HYZ0, Q8IYV9, Q8JZL1, Q8NFM7, Q8WWG1, Q90375
Diamond homologs: B1B5J0, P01132, P0DMY9, P0DMZ0, P15638, P86468, P86469, P98121, Q6QNF4, Q76CA1, Q8WWG1, Q94918, Q9R098, Q9WTX4, A2AJ76, A2ASS6, D3YXG0, G4SLH0, O01761, O08775, O14511, O35136, O35181, O35569, O60469, O89026, O93383, P07522, P12960, P13591, P14781, P22063, P28685, P35918, P43322, P56974, P56975, P57087, Q00968, Q02246
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| NRG4 | up-regulates | ERBB4 | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
21 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 18 |
| Likely benign | 0 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1608 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 15:75961824:TTA:T | donor_loss | 1.0000 |
| 15:75961825:TAC:T | donor_loss | 1.0000 |
| 15:75961826:A:AC | donor_gain | 1.0000 |
| 15:75961826:AC:A | donor_gain | 1.0000 |
| 15:75961826:ACCTG:A | donor_gain | 1.0000 |
| 15:75961827:C:CT | donor_gain | 1.0000 |
| 15:75961827:CC:C | donor_gain | 1.0000 |
| 15:75961827:CCT:C | donor_gain | 1.0000 |
| 15:75961827:CCTG:C | donor_gain | 1.0000 |
| 15:75961827:CCTGC:C | donor_gain | 1.0000 |
| 15:75961970:CGCAC:C | acceptor_gain | 1.0000 |
| 15:75961972:CAC:C | acceptor_gain | 1.0000 |
| 15:75969186:T:C | acceptor_gain | 1.0000 |
| 15:76009307:A:C | acceptor_gain | 1.0000 |
| 15:75955930:A:AC | donor_gain | 0.9900 |
| 15:75955931:C:CC | donor_gain | 0.9900 |
| 15:75955931:CT:C | donor_gain | 0.9900 |
| 15:75961973:ACCT:A | acceptor_gain | 0.9900 |
| 15:75969182:CAACT:C | acceptor_gain | 0.9900 |
| 15:76005810:C:CC | acceptor_gain | 0.9900 |
| 15:76009294:C:CC | acceptor_gain | 0.9900 |
| 15:76009303:A:C | acceptor_gain | 0.9900 |
| 15:76009306:CATA:C | acceptor_gain | 0.9900 |
| 15:76009309:A:C | acceptor_gain | 0.9900 |
| 15:76011216:ATTAC:A | donor_loss | 0.9900 |
| 15:76011217:TTACC:T | donor_loss | 0.9900 |
| 15:76011218:TAC:T | donor_loss | 0.9900 |
| 15:76011220:CC:C | donor_loss | 0.9900 |
| 15:76011284:TACCT:T | acceptor_loss | 0.9900 |
| 15:76011286:CCTAA:C | acceptor_loss | 0.9900 |
AlphaMissense
765 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 15:75961945:C:G | C45S | 0.996 |
| 15:75961946:A:T | C45S | 0.996 |
| 15:76009236:C:G | C23S | 0.991 |
| 15:76009237:A:T | C23S | 0.991 |
| 15:76009254:C:G | C17S | 0.991 |
| 15:76009255:A:T | C17S | 0.991 |
| 15:75961945:C:T | C45Y | 0.989 |
| 15:75961946:A:G | C45R | 0.989 |
| 15:76009203:C:G | C34S | 0.989 |
| 15:76009204:A:T | C34S | 0.989 |
| 15:76009256:A:C | F16L | 0.989 |
| 15:76009256:A:T | F16L | 0.989 |
| 15:76009258:A:G | F16L | 0.989 |
| 15:75961945:C:A | C45F | 0.988 |
| 15:75961972:C:G | C36S | 0.988 |
| 15:75961973:A:T | C36S | 0.988 |
| 15:75961954:C:A | G42V | 0.987 |
| 15:76009237:A:G | C23R | 0.986 |
| 15:76009255:A:G | C17R | 0.986 |
| 15:76009257:A:C | F16C | 0.985 |
| 15:76009203:C:T | C34Y | 0.984 |
| 15:76009235:A:C | C23W | 0.984 |
| 15:76009236:C:T | C23Y | 0.983 |
| 15:75961944:A:C | C45W | 0.982 |
| 15:75961948:C:G | R44P | 0.982 |
| 15:75961973:A:G | C36R | 0.982 |
| 15:76009204:A:G | C34R | 0.982 |
| 15:75961954:C:T | G42E | 0.981 |
| 15:76009202:A:C | C34W | 0.980 |
| 15:76009254:C:T | C17Y | 0.980 |
dbSNP variants (sampled 300 via entrez): RS1000007596 (15:75993197 G>A,T), RS1000053820 (15:76054500 C>T), RS1000077660 (15:76046822 C>T), RS1000102404 (15:75978042 C>G), RS1000105070 (15:75992848 T>G), RS1000105515 (15:75944039 C>G), RS1000114277 (15:76057099 T>G), RS1000166422 (15:75945391 C>G), RS1000204239 (15:75963461 C>G), RS1000211844 (15:76029303 A>G), RS1000234343 (15:75984787 A>G,T), RS1000248084 (15:75973480 C>T), RS1000277525 (15:75937137 CAT>C), RS1000303087 (15:76007481 G>C), RS1000340618 (15:76036834 G>T)
Disease associations
OMIM: gene MIM:610894 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
30 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001765_18 | Red blood cell traits | 3.000000e-10 |
| GCST001791_42 | Urate levels | 3.000000e-13 |
| GCST002828_24 | Urate levels in obese individuals | 8.000000e-06 |
| GCST004203_4 | Diastolic blood pressure | 3.000000e-09 |
| GCST004601_129 | Red blood cell count | 5.000000e-20 |
| GCST004601_130 | Red blood cell count | 2.000000e-14 |
| GCST004604_10 | Hematocrit | 1.000000e-14 |
| GCST004604_71 | Hematocrit | 2.000000e-26 |
| GCST004615_102 | Hemoglobin concentration | 3.000000e-24 |
| GCST006624_58 | Systolic blood pressure | 9.000000e-13 |
| GCST007267_13 | Systolic blood pressure | 2.000000e-12 |
| GCST007733_57 | Serum uric acid levels | 8.000000e-10 |
| GCST007733_8 | Serum uric acid levels | 4.000000e-06 |
| GCST007876_30 | Estimated glomerular filtration rate | 3.000000e-25 |
| GCST008058_158 | Estimated glomerular filtration rate | 2.000000e-61 |
| GCST008059_120 | Estimated glomerular filtration rate | 1.000000e-50 |
| GCST008060_28 | Estimated glomerular filtration rate | 9.000000e-06 |
| GCST008062_13 | Blood urea nitrogen levels | 5.000000e-30 |
| GCST008745_13 | Estimated glomerular filtration rate in non-diabetics | 1.000000e-18 |
| GCST008747_46 | Estimated glomerular filtration rate | 2.000000e-33 |
| GCST008971_107 | Urate levels | 4.000000e-32 |
| GCST008971_40 | Urate levels | 5.000000e-14 |
| GCST008972_116 | Urate levels | 2.000000e-06 |
| GCST008972_176 | Urate levels | 3.000000e-39 |
| GCST009391_628 | Metabolite levels | 6.000000e-06 |
| GCST90002383_231 | Hematocrit | 9.000000e-23 |
| GCST90002383_232 | Hematocrit | 1.000000e-48 |
| GCST90002384_344 | Hemoglobin | 2.000000e-20 |
| GCST90002384_345 | Hemoglobin | 2.000000e-44 |
| GCST90002403_495 | Red blood cell count | 6.000000e-41 |
EFO canonical traits (8, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004509 | hemoglobin measurement |
| EFO:0004531 | urate measurement |
| EFO:0006336 | diastolic blood pressure |
| EFO:0004305 | erythrocyte count |
| EFO:0004348 | hematocrit |
| EFO:0006335 | systolic blood pressure |
| EFO:0004761 | uric acid measurement |
| EFO:0010502 | indoxyl sulfate measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
12 total (human), top 12 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| sodium arsenite | decreases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| abrine | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | decreases expression | 1 |
| Silicon Dioxide | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Urethane | decreases expression | 1 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | increases expression | 1 |
| Cadmium Chloride | decreases expression | 1 |
| Okadaic Acid | decreases expression | 1 |
Cellosaurus cell lines
1 cell lines: 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1Z8 | Abcam HeLa NRG4 KO | Cancer cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.