NRIP3-DT

Summary

NRIP3-DT (NRIP3 divergent transcript, HGNC:55524) is a long non-coding RNA gene on chromosome 11p15.4.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55524
Approved symbol	NRIP3-DT
Name	NRIP3 divergent transcript
Location	11p15.4
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253973
Ensembl biotype	lncRNA
Entrez	105376541
RNAcentral	URS00026A24C9 — lncRNA, 3848 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000521394, ENST00000531592, ENST00000661716, ENST00000670061, ENST00000782976

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000521394 — 4 exons

Exon	Start	End
ENSE00002125643	9059608	9059739
ENSE00002126846	9064532	9067500
ENSE00004156545	9056498	9057455
ENSE00004156546	9004143	9004543

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 80.05.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellar cortex	UBERON:0002129	80.05	gold quality
cerebellum	UBERON:0002037	80.02	gold quality
cerebellar hemisphere	UBERON:0002245	80.01	gold quality
right hemisphere of cerebellum	UBERON:0014890	78.93	gold quality
superior frontal gyrus	UBERON:0002661	65.40	gold quality
prefrontal cortex	UBERON:0000451	64.50	gold quality
sural nerve	UBERON:0015488	64.28	silver quality
nucleus accumbens	UBERON:0001882	63.90	gold quality
frontal cortex	UBERON:0001870	62.54	gold quality
putamen	UBERON:0001874	62.50	gold quality
primary visual cortex	UBERON:0002436	62.40	gold quality
monocyte	CL:0000576	61.92	gold quality
brain	UBERON:0000955	61.66	gold quality
cerebral cortex	UBERON:0000956	60.96	gold quality
caudate nucleus	UBERON:0001873	60.72	gold quality
calcaneal tendon	UBERON:0003701	60.65	gold quality
anterior cingulate cortex	UBERON:0009835	60.03	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	59.98	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.81	gold quality
right frontal lobe	UBERON:0002810	59.50	gold quality
Ammon’s horn	UBERON:0001954	59.44	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.44	gold quality
temporal lobe	UBERON:0001871	57.23	gold quality
amygdala	UBERON:0001876	57.03	gold quality
ganglionic eminence	UBERON:0004023	56.84	silver quality
hypothalamus	UBERON:0001898	56.00	gold quality
urinary bladder	UBERON:0001255	54.15	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.86	gold quality
vermiform appendix	UBERON:0001154	50.90	gold quality
substantia nigra	UBERON:0002038	50.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.