NRK
gene geneOn this page
Also known as DKFZp686A17109
Summary
NRK (Nik related kinase, HGNC:25391) is a protein-coding gene on chromosome Xq22.3, encoding Nik-related protein kinase (Q7Z2Y5). May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages of embryogenesis.
The mouse ortholog of this gene encodes a protein kinase required for JNK activation. The encoded protein may be involved in the induction of actin polymerization in late embryogenesis.
Source: NCBI Gene 203447 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 307 total
- Phenotypes (HPO): 1
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 1 cancer types
- MANE Select transcript:
NM_198465
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:25391 |
| Approved symbol | NRK |
| Name | Nik related kinase |
| Location | Xq22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DKFZp686A17109 |
| Ensembl gene | ENSG00000123572 |
| Ensembl biotype | protein_coding |
| OMIM | 300791 |
| Entrez | 203447 |
Gene structure
Transcript identifiers
Ensembl transcripts: 6 — 5 protein_coding, 1 nonsense_mediated_decay
ENST00000243300, ENST00000428173, ENST00000536164, ENST00000540278, ENST00000882683, ENST00000882684
RefSeq mRNA: 1 — MANE Select: NM_198465
NM_198465
CCDS: CCDS65305
Canonical transcript exons
ENST00000243300 — 29 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001611183 | 105955505 | 105958610 |
| ENSE00001619702 | 105888294 | 105888419 |
| ENSE00001629171 | 105900618 | 105900672 |
| ENSE00001629382 | 105880199 | 105880255 |
| ENSE00001654467 | 105895433 | 105895523 |
| ENSE00001659882 | 105905265 | 105905343 |
| ENSE00001686232 | 105953034 | 105953173 |
| ENSE00001688932 | 105893832 | 105893942 |
| ENSE00001697981 | 105949575 | 105949734 |
| ENSE00001713084 | 105908240 | 105908303 |
| ENSE00001721889 | 105945872 | 105946015 |
| ENSE00001738379 | 105946315 | 105946464 |
| ENSE00001743327 | 105943941 | 105944041 |
| ENSE00001743504 | 105881708 | 105881779 |
| ENSE00001751732 | 105906414 | 105906589 |
| ENSE00001765896 | 105898584 | 105898714 |
| ENSE00001779479 | 105939874 | 105940032 |
| ENSE00001806791 | 105831054 | 105831119 |
| ENSE00002122070 | 105822539 | 105822902 |
| ENSE00003711572 | 105917578 | 105917672 |
| ENSE00003713251 | 105915730 | 105915797 |
| ENSE00003713369 | 105908727 | 105909882 |
| ENSE00003721886 | 105923118 | 105923482 |
| ENSE00003723679 | 105937439 | 105937582 |
| ENSE00003726250 | 105912648 | 105912755 |
| ENSE00003732833 | 105924695 | 105925031 |
| ENSE00003741697 | 105935170 | 105935325 |
| ENSE00003742642 | 105934258 | 105934444 |
| ENSE00003749873 | 105921964 | 105922061 |
Expression profiles
Bgee: expression breadth ubiquitous, 166 present calls, max score 98.84.
FANTOM5 (CAGE): breadth broad, TPM avg 5.1157 / max 770.6052, expressed in 502 samples.
FANTOM5 promoters (8 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 197146 | 3.1734 | 408 |
| 197145 | 0.7925 | 240 |
| 197147 | 0.5210 | 146 |
| 197148 | 0.2474 | 116 |
| 197143 | 0.2333 | 78 |
| 197144 | 0.0746 | 27 |
| 197149 | 0.0377 | 4 |
| 197150 | 0.0359 | 4 |
Top tissues by expression
241 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| tibia | UBERON:0000979 | 98.84 | gold quality |
| adrenal tissue | UBERON:0018303 | 98.65 | gold quality |
| placenta | UBERON:0001987 | 94.57 | gold quality |
| cartilage tissue | UBERON:0002418 | 91.14 | gold quality |
| kidney epithelium | UBERON:0004819 | 87.99 | gold quality |
| ovary | UBERON:0000992 | 87.67 | gold quality |
| left ovary | UBERON:0002119 | 87.17 | gold quality |
| cauda epididymis | UBERON:0004360 | 86.91 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 86.72 | gold quality |
| parietal pleura | UBERON:0002400 | 86.59 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 85.88 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 85.64 | gold quality |
| right ovary | UBERON:0002118 | 84.58 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 84.29 | gold quality |
| adrenal cortex | UBERON:0001235 | 84.16 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 83.73 | gold quality |
| adrenal gland | UBERON:0002369 | 83.55 | gold quality |
| left adrenal gland | UBERON:0001234 | 83.02 | gold quality |
| right adrenal gland | UBERON:0001233 | 82.77 | gold quality |
| buccal mucosa cell | CL:0002336 | 81.57 | gold quality |
| corpus epididymis | UBERON:0004359 | 81.50 | gold quality |
| cerebellar vermis | UBERON:0004720 | 81.20 | gold quality |
| caput epididymis | UBERON:0004358 | 81.19 | gold quality |
| renal medulla | UBERON:0000362 | 81.08 | gold quality |
| gall bladder | UBERON:0002110 | 80.67 | gold quality |
| calcaneal tendon | UBERON:0003701 | 78.52 | gold quality |
| metanephros | UBERON:0000081 | 77.70 | gold quality |
| kidney | UBERON:0002113 | 75.57 | gold quality |
| tendon | UBERON:0000043 | 75.12 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 73.57 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-119 | yes | 45.47 |
| E-MTAB-10042 | yes | 8.40 |
| E-CURD-112 | yes | 6.57 |
| E-ANND-3 | yes | 6.32 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
221 targeting NRK, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-3134 | 100.00 | 66.43 | 777 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-520G-5P | 99.99 | 66.76 | 658 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-32-5P | 99.98 | 75.21 | 1964 |
Literature-anchored findings (GeneRIF, showing 4)
- The results suggest that Nrk suppresses the excessive proliferation of mammary epithelial cells during pregnancy, and the impairment of this regulatory system leads to frequent occurrence of breast tumor in Nrk mutant mice. (PMID:27634343)
- Nik-related kinase is targeted for proteasomal degradation by the chaperone-dependent ubiquitin ligase CHIP. (PMID:32162334)
- Identification of a novel therapeutic candidate, NRK, in primary cancer-associated fibroblasts of lung adenocarcinoma microenvironment. (PMID:33387038)
- Identification and functional activity of Nik related kinase (NRK) in benign hyperplastic prostate. (PMID:38459501)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Nrk | ENSMUSG00000052854 |
| rattus_norvegicus | Nrk | ENSRNOG00000008880 |
Paralogs (35): MAP3K14 (ENSG00000006062), MAP4K3 (ENSG00000011566), MAP4K5 (ENSG00000012983), MAP2K3 (ENSG00000034152), SLK (ENSG00000065613), MAP4K4 (ENSG00000071054), STK10 (ENSG00000072786), PAK3 (ENSG00000077264), STRADB (ENSG00000082146), MAP3K1 (ENSG00000095015), STK4 (ENSG00000101109), PAK5 (ENSG00000101349), STK24 (ENSG00000102572), STK3 (ENSG00000104375), MAP4K1 (ENSG00000104814), MAP3K8 (ENSG00000107968), MAP2K6 (ENSG00000108984), NEK4 (ENSG00000114904), STK25 (ENSG00000115694), PAK4 (ENSG00000130669), STK26 (ENSG00000134602), TAOK3 (ENSG00000135090), PAK6 (ENSG00000137843), MINK1 (ENSG00000141503), PAK1 (ENSG00000149269), TAOK2 (ENSG00000149930), TNIK (ENSG00000154310), TAOK1 (ENSG00000160551), MAP4K2 (ENSG00000168067), OXSR1 (ENSG00000172939), MAP3K19 (ENSG00000176601), PAK2 (ENSG00000180370), SBK2 (ENSG00000187550), STK39 (ENSG00000198648), STRADA (ENSG00000266173)
Protein
Protein identifiers
Nik-related protein kinase — Q7Z2Y5 (reviewed: Q7Z2Y5)
All UniProt accessions (3): B7Z1I7, Q7Z2Y5, F5H049
UniProt curated annotations — full annotation on UniProt →
Function. May phosphorylate cofilin-1 and induce actin polymerization through this process, during the late stages of embryogenesis. Involved in the TNF-induced signaling pathway.
Similarity. Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q7Z2Y5-1 | 1 | yes |
| Q7Z2Y5-2 | 2 | |
| Q7Z2Y5-3 | 3 |
RefSeq proteins (1): NP_940867* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001180 | CNH_dom | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR051700 | STE20_Ser-Thr_kinase | Family |
Pfam: PF00069, PF00780
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (51 total): sequence variant 15, compositionally biased region 12, modified residue 5, sequence conflict 5, splice variant 4, region of interest 3, domain 2, binding site 2, chain 1, active site 1, coiled-coil region 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q7Z2Y5-F1 | 47.87 | 0.10 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 177 (proton acceptor)
Ligand- & substrate-binding residues (2): 31–39; 54
Post-translational modifications (5): 852, 855, 1027, 1031, 1034
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 176 (showing top):
RNGTGGGC_UNKNOWN, ACTACCT_MIR196A_MIR196B, E2F4DP1_01, GCANCTGNY_MYOD_Q6, ATACCTC_MIR202, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, AACYNNNNTTCCS_UNKNOWN, HNF1_Q6, GGGTGGRR_PAX4_03, AATGGAG_MIR136, CAGCTG_AP4_Q5, E2F1DP1_01, MCBRYAN_PUBERTAL_BREAST_4_5WK_DN, E2F1DP2_01, PID_TNF_PATHWAY
GO Biological Process (2): positive regulation of JNK cascade (GO:0046330), protein phosphorylation (GO:0006468)
GO Molecular Function (7): protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), ATP binding (GO:0005524), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (1): membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| protein kinase activity | 2 |
| JNK cascade | 1 |
| positive regulation of MAPK cascade | 1 |
| regulation of JNK cascade | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
230 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| NRK | KRTAP7-1 | Q8IUC3 | 530 |
| NRK | KLHDC10 | Q6PID8 | 495 |
| NRK | RRAGC | Q9HB90 | 393 |
| NRK | FGL2 | Q14314 | 349 |
| NRK | C9orf152 | Q5JTZ5 | 328 |
| NRK | MBP | P02686 | 312 |
| NRK | RMDN2 | Q96LZ7 | 305 |
| NRK | AKAP14 | Q86UN6 | 305 |
| NRK | MYBPC1 | Q00872 | 278 |
| NRK | AKNAD1 | Q5T1N1 | 262 |
| NRK | RGS5 | O15539 | 254 |
| NRK | SH3RF2 | Q8TEC5 | 253 |
| NRK | RUFY3 | Q7L099 | 250 |
| NRK | PLAC1 | Q9HBJ0 | 237 |
| NRK | PAK1IP1 | Q9NWT1 | 228 |
IntAct
3 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| RYBP | PIPSL | psi-mi:“MI:0914”(association) | 0.350 |
| DYRK1A | TEX13D | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (10): NRK (Proximity Label-MS), NRK (Affinity Capture-MS), NRK (Positive Genetic), UHRF1BP1 (Affinity Capture-MS), NRK (Affinity Capture-MS), PLCB3 (Cross-Linking-MS (XL-MS)), NRK (Cross-Linking-MS (XL-MS)), NRK (Proximity Label-MS), NRK (Proximity Label-MS), NRK (Proximity Label-MS)
ESM2 similar proteins: A0JPK3, A1YFX5, A2RQG7, A7KBS4, F4JUI3, G3X9G7, O49498, P03131, P04605, P04614, P05909, P0C1K0, P11332, P12453, P18098, P24109, P35965, P98182, Q09424, Q0VCB0, Q19203, Q2YDJ5, Q3UZB0, Q567C6, Q5BI31, Q5EXX3, Q5M948, Q62396, Q6AXY9, Q6PB60, Q6PI77, Q71HP2, Q74124, Q7JUR5, Q7Z142, Q7Z2Y5, Q80YD3, Q86UQ0, Q8C0P7, Q8C6P8
Diamond homologs: A4K2M3, A4K2P5, A4K2Q5, A4K2S1, A4K2T0, A4K2W5, A4K2Y1, A8XJW8, B0LT89, B7ZR30, E1BK52, E9PTG8, F1LP90, F1NBT0, H2L099, O00506, O08815, O14047, O14305, O24527, O54748, O54988, O55092, O55098, O61122, O61125, O88664, O94804, O95819, P46549, P50527, P70218, P83510, P97820, Q0IHQ8, Q0KHQ5, Q12851, Q13043, Q13188, Q1EG27
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| STUB1 | “down-regulates quantity by destabilization” | NRK | polyubiquitination |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 1 cancer types — LUSC.
Clinical variants and AI predictions
ClinVar
307 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 162 |
| Likely benign | 16 |
| Benign | 6 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
4249 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:105831048:TTGCA:T | acceptor_loss | 1.0000 |
| X:105831049:TGCA:T | acceptor_loss | 1.0000 |
| X:105831050:GCAG:G | acceptor_loss | 1.0000 |
| X:105831051:CAG:C | acceptor_loss | 1.0000 |
| X:105831052:A:AG | acceptor_gain | 1.0000 |
| X:105831052:A:AT | acceptor_loss | 1.0000 |
| X:105831052:AG:A | acceptor_gain | 1.0000 |
| X:105831053:G:GA | acceptor_gain | 1.0000 |
| X:105831053:GG:G | acceptor_gain | 1.0000 |
| X:105831053:GGATC:G | acceptor_gain | 1.0000 |
| X:105831116:TTTGG:T | donor_loss | 1.0000 |
| X:105831117:TTGG:T | donor_loss | 1.0000 |
| X:105831118:TGGT:T | donor_loss | 1.0000 |
| X:105831119:GGTA:G | donor_loss | 1.0000 |
| X:105831120:G:GG | donor_gain | 1.0000 |
| X:105893818:T:A | acceptor_gain | 1.0000 |
| X:105893827:TGCAG:T | acceptor_loss | 1.0000 |
| X:105893828:GCAGA:G | acceptor_loss | 1.0000 |
| X:105893829:CA:C | acceptor_loss | 1.0000 |
| X:105893830:A:AG | acceptor_gain | 1.0000 |
| X:105893830:A:AT | acceptor_loss | 1.0000 |
| X:105893830:AGAT:A | acceptor_gain | 1.0000 |
| X:105893831:G:GG | acceptor_gain | 1.0000 |
| X:105893831:GATG:G | acceptor_gain | 1.0000 |
| X:105893939:TCAGG:T | donor_loss | 1.0000 |
| X:105893940:CAGGT:C | donor_loss | 1.0000 |
| X:105893941:AGGT:A | donor_loss | 1.0000 |
| X:105893942:GGTG:G | donor_loss | 1.0000 |
| X:105893943:G:GG | donor_gain | 1.0000 |
| X:105893944:T:G | donor_loss | 1.0000 |
AlphaMissense
10363 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:105895473:A:C | D177A | 0.998 |
| X:105895473:A:T | D177V | 0.998 |
| X:105898587:A:T | D195V | 0.998 |
| X:105898637:T:C | F212L | 0.998 |
| X:105898639:C:A | F212L | 0.998 |
| X:105898639:C:G | F212L | 0.998 |
| X:105900627:T:A | W241R | 0.998 |
| X:105900627:T:C | W241R | 0.998 |
| X:105888417:T:A | W126R | 0.997 |
| X:105888417:T:C | W126R | 0.997 |
| X:105898589:T:C | F196L | 0.997 |
| X:105898591:T:A | F196L | 0.997 |
| X:105898591:T:G | F196L | 0.997 |
| X:105898643:G:T | G214W | 0.997 |
| X:105898655:T:A | W218R | 0.997 |
| X:105898655:T:C | W218R | 0.997 |
| X:105937472:T:C | L1230P | 0.997 |
| X:105937568:T:C | L1262P | 0.997 |
| X:105888322:T:C | L94P | 0.996 |
| X:105895479:A:T | K179I | 0.996 |
| X:105898644:G:A | G214E | 0.996 |
| X:105888331:T:C | L97P | 0.995 |
| X:105895474:C:A | D177E | 0.995 |
| X:105895474:C:G | D177E | 0.995 |
| X:105898584:T:A | V194D | 0.995 |
| X:105898586:G:C | D195H | 0.995 |
| X:105898587:A:C | D195A | 0.995 |
| X:105898588:T:A | D195E | 0.995 |
| X:105898588:T:G | D195E | 0.995 |
| X:105898638:T:C | F212S | 0.995 |
dbSNP variants (sampled 300 via entrez): RS1000065932 (X:105916525 A>G), RS1000142081 (X:105938762 T>G), RS1000175455 (X:105937341 T>A), RS1000203694 (X:105832281 G>C), RS1000204400 (X:105869642 C>A,T), RS1000211098 (X:105896762 G>A), RS1000275227 (X:105907326 A>G), RS1000301794 (X:105877747 C>A), RS1000336904 (X:105927382 T>C), RS1000337517 (X:105887753 A>G), RS1000364295 (X:105954842 G>T), RS1000372485 (X:105887280 A>T), RS1000372572 (X:105953658 C>T), RS1000384376 (X:105899907 G>A), RS1000407564 (X:105867734 T>C)
Disease associations
OMIM: gene MIM:300791 | disease phenotypes: MIM:209850
GenCC curated gene-disease
Mondo (1): autism (MONDO:0005260)
Orphanet (0):
HPO phenotypes
1 total (1 of 1 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000717 | Autism |
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST009391_1039 | Metabolite levels | 1.000000e-20 |
| GCST009391_1041 | Metabolite levels | 5.000000e-12 |
| GCST009391_1047 | Metabolite levels | 1.000000e-06 |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D001321 | Autistic Disorder | F03.625.164.113.500 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — MSN subfamily
CTD chemical–gene interactions
28 total (human), top 28 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, increases methylation | 6 |
| bisphenol A | affects cotreatment, decreases methylation, decreases expression | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| (+)-JQ1 compound | decreases expression | 2 |
| Benzo(a)pyrene | affects methylation, increases mutagenesis | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| geldanamycin | increases expression | 1 |
| trichostatin A | increases expression | 1 |
| sodium arsenite | increases abundance, increases expression, affects cotreatment | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| potassium chromate(VI) | increases expression | 1 |
| mercuric bromide | affects cotreatment, increases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Sunitinib | increases expression | 1 |
| Fulvestrant | affects cotreatment, decreases methylation | 1 |
| Panobinostat | affects cotreatment, increases expression | 1 |
| Arsenic | increases expression, affects cotreatment, increases abundance | 1 |
| Manganese | affects cotreatment, increases abundance, increases expression | 1 |
| Nickel | decreases expression | 1 |
| Oxygen | increases expression | 1 |
| Potassium Dichromate | increases expression | 1 |
| Tretinoin | increases expression | 1 |
| Antirheumatic Agents | increases expression | 1 |
| Cadmium Chloride | increases expression | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00211796 | PHASE4 | COMPLETED | Divalproex Sodium ER in Adult Autism |
| NCT00391261 | PHASE4 | COMPLETED | An Open-label Trial of Metformin for Weight Control of Pediatric Patients on Antipsychotic Medications. |
| NCT00409747 | PHASE4 | COMPLETED | Minocycline to Treat Childhood Regressive Autism |
| NCT00576732 | PHASE4 | COMPLETED | A Study of the Effectiveness and Safety of Two Doses of Risperidone in the Treatment of Children and Adolescents With Autistic Disorder |
| NCT00844753 | PHASE4 | COMPLETED | Atomoxetine, Placebo and Parent Management Training in Autism |
| NCT01028820 | PHASE4 | COMPLETED | FMRI Brain Activation of Aripiprazole Treatment in Autism Spectrum Disorders |
| NCT01098383 | PHASE4 | UNKNOWN | Treatment With Acetyl-Choline Esterase Inhibitors in Children With Autism Spectrum Disorders |
| NCT01333865 | PHASE4 | COMPLETED | A Study of Memantine Hydrochloride (Namenda®) for Cognitive and Behavioral Impairment in Adults With Autism Spectrum Disorders |
| NCT01337700 | PHASE4 | COMPLETED | Milnacipran in Autism and the Functional Locus Coeruleus and Noradrenergic Model of Autism |
| NCT01695200 | PHASE4 | COMPLETED | Omega-3 Fatty Acids in Autism Spectrum Disorders |
| NCT02069977 | PHASE4 | UNKNOWN | Study to Evaluate the Efficacy and Safety of Aripiprazole |
| NCT02096952 | PHASE4 | COMPLETED | Methylphenidate ER Liquid Formulation in Adults With ASD and ADHD |
| NCT02199925 | PHASE4 | UNKNOWN | An Open-Label Study to Evaluate the Efficacy of High-Dose Gammaplex in Children on the Autism Spectrum |
| NCT02235467 | PHASE4 | COMPLETED | Multisite Study: Parental Training Using Video Modelling to Develop Social Skills in Children With Autism |
| NCT02255565 | PHASE4 | COMPLETED | Dose Response Effects of Quillivant XR in Children With ADHD and Autism: A Pilot Study |
| NCT02940574 | PHASE4 | COMPLETED | Neural and Behavioral Effects of Oxytocin in Autism Spectrum Disorders |
| NCT03333629 | PHASE4 | COMPLETED | Promoting Positive Outcomes for Individuals With ASD: Linking Early Detection, Treatment, and Long-term Outcomes |
| NCT03337646 | PHASE4 | COMPLETED | Evaluation of the Effect and Safety of Lisdexamfetamine in Children Aged 6-12 With ADHD and Autism |
| NCT03538431 | PHASE4 | COMPLETED | Improving Driving in Young People With Autism Spectrum Disorders |
| NCT03757585 | PHASE4 | COMPLETED | Natural Treatments for the Management of Emotional Dysregulation in Youth With Non-verbal Learning Disability (NVLD) and/or Autism Spectrum Disorders (ASD) |
| NCT04903353 | PHASE4 | COMPLETED | Pragmatic Trial Comparing Weight Gain in Children With Autism Taking Risperidone Versus Aripiprazole |
| NCT05063656 | PHASE4 | COMPLETED | Biomarker-Driven Pharmacological Treatment of Adolescents With Autism Spectrum Disorder With Gabapentin |
| NCT05146245 | PHASE4 | UNKNOWN | Safety and Pharmacokinetics of Antipsychotics in Children 2: Studying TDM in an RCT |
| NCT05916339 | PHASE4 | RECRUITING | AWARE: Management of ADHD in Autism Spectrum Disorder |
| NCT05954052 | PHASE4 | TERMINATED | A Study of Glutathione in Children With Autism Spectrum Disorder |
| NCT06853665 | PHASE4 | RECRUITING | The TEAM Study - Treatment Efficacy for Autism/Attention Using Mixed Amphetamine |
| NCT07054697 | PHASE4 | COMPLETED | Pilot-RCT With Individualized Homeopathic Treatment in the Children With Autism Spectrum Disorder |
| NCT07161804 | PHASE4 | COMPLETED | Pilot RCT Using Homeopathic Medicines in ASD |
| NCT07439042 | PHASE4 | NOT_YET_RECRUITING | Buspirone for Anxiety in Autistic Youth |
| NCT00036231 | PHASE3 | TERMINATED | Synthetic Human Secretin in Children With Autism and Gastrointestinal Dysfunction |
| NCT00036244 | PHASE3 | COMPLETED | Synthetic Human Secretin in Children With Autism |
| NCT00065884 | PHASE3 | UNKNOWN | Valproate Response in Aggressive Autistic Adolescents |
| NCT00065962 | PHASE3 | COMPLETED | Secretin for the Treatment of Autism |
| NCT00252603 | PHASE3 | COMPLETED | Galantamine Versus Placebo in Childhood Autism |
| NCT00346736 | PHASE3 | COMPLETED | Use of Acupuncture In Children With Autistic Spectrum Disorder |
| NCT00352248 | PHASE3 | COMPLETED | Randomized Controlled Trial of Acupuncture Versus Sham Acupuncture in Autistic Spectrum Disorder |
| NCT00352352 | PHASE3 | COMPLETED | Use of Acupuncture In Children With Autistic Spectrum Disorder |
| NCT00355329 | PHASE3 | COMPLETED | Randomized Control Trial of Using Tongue Acupuncture in Autistic Spectrum Disorder Using PET Scan for Clinical Correlation |
| NCT00498173 | PHASE3 | COMPLETED | Effectiveness of Atomoxetine in Treating ADHD Symptoms in Children and Adolescents With Autism |
| NCT00541346 | PHASE3 | COMPLETED | A Pilot Study of Daytrana TM in Children With Autism Co-Morbid for Attention Deficit Hyperactivity Disorder (ADHD) Symptoms |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.