NTM-AS1

Summary

NTM-AS1 (NTM antisense RNA 1, HGNC:32293) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32293
Approved symbol	NTM-AS1
Name	NTM antisense RNA 1
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ45436
Ensembl gene	ENSG00000224795
Ensembl biotype	lncRNA
Entrez	101929637
RNAcentral	URS00007E48E9 — lncRNA, 678 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000416725, ENST00000663555, ENST00000775197, ENST00000775198, ENST00000775199

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416725 — 2 exons

Exon	Start	End
ENSE00004141759	131663166	131663635
ENSE00004141760	131658310	131662415

Expression profiles

Bgee: expression breadth broad, 63 present calls, max score 84.97.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.1675 / max 108.5483, expressed in 88 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
123183	1.0410	85
123184	0.0745	49
123182	0.0520	37

Top tissues by expression

63 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	84.97	gold quality
putamen	UBERON:0001874	73.21	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.19	silver quality
substantia nigra	UBERON:0002038	71.87	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	71.69	gold quality
caudate nucleus	UBERON:0001873	70.52	gold quality
amygdala	UBERON:0001876	69.72	gold quality
temporal lobe	UBERON:0001871	69.69	gold quality
Ammon’s horn	UBERON:0001954	69.62	gold quality
colonic epithelium	UBERON:0000397	67.98	silver quality
nucleus accumbens	UBERON:0001882	65.69	gold quality
primary visual cortex	UBERON:0002436	65.55	gold quality
prefrontal cortex	UBERON:0000451	65.36	gold quality
brain	UBERON:0000955	64.45	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.20	gold quality
frontal cortex	UBERON:0001870	64.14	gold quality
cerebral cortex	UBERON:0000956	63.94	gold quality
hypothalamus	UBERON:0001898	62.74	gold quality
right frontal lobe	UBERON:0002810	62.31	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	62.18	gold quality
anterior cingulate cortex	UBERON:0009835	60.56	gold quality
multicellular organism	UBERON:0000468	60.36	gold quality
superior frontal gyrus	UBERON:0002661	59.96	gold quality
sural nerve	UBERON:0015488	55.27	silver quality
blood	UBERON:0000178	55.05	gold quality
small intestine	UBERON:0002108	53.83	silver quality
monocyte	CL:0000576	51.30	silver quality
saliva-secreting gland	UBERON:0001044	49.85	gold quality
myometrium	UBERON:0001296	48.12	silver quality
cerebellum	UBERON:0002037	47.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.40

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.