NTM-AS3

Summary

NTM-AS3 (NTM antisense RNA 3, HGNC:40822) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40822
Approved symbol	NTM-AS3
Name	NTM antisense RNA 3
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238117
Ensembl biotype	lncRNA
Entrez	139355216
RNAcentral	URS0002A2C592 — lncRNA, 589 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000419440, ENST00000797380

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419440 — 2 exons

Exon	Start	End
ENSE00001733897	131877680	131878104
ENSE00001777912	131897025	131897108

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 66.28.

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	66.28	gold quality
minor salivary gland	UBERON:0001830	64.37	gold quality
adult mammalian kidney	UBERON:0000082	62.61	gold quality
prostate gland	UBERON:0002367	58.11	gold quality
primary visual cortex	UBERON:0002436	55.30	gold quality
islet of Langerhans	UBERON:0000006	54.00	gold quality
prefrontal cortex	UBERON:0000451	52.27	gold quality
gall bladder	UBERON:0002110	51.86	gold quality
superior frontal gyrus	UBERON:0002661	51.24	gold quality
thoracic mammary gland	UBERON:0005200	50.56	gold quality
cortex of kidney	UBERON:0001225	50.49	silver quality
smooth muscle tissue	UBERON:0001135	50.23	gold quality
cerebellum	UBERON:0002037	50.12	gold quality
cerebellar cortex	UBERON:0002129	50.07	gold quality
cerebellar hemisphere	UBERON:0002245	50.04	gold quality
substantia nigra	UBERON:0002038	49.47	gold quality
right hemisphere of cerebellum	UBERON:0014890	48.52	gold quality
multicellular organism	UBERON:0000468	47.56	gold quality
right atrium auricular region	UBERON:0006631	47.04	gold quality
stomach	UBERON:0000945	46.94	gold quality
blood	UBERON:0000178	46.58	silver quality
brain	UBERON:0000955	46.49	gold quality
Brodmann (1909) area 9	UBERON:0013540	46.35	gold quality
gastrocnemius	UBERON:0001388	45.99	silver quality
body of stomach	UBERON:0001161	45.78	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	45.61	gold quality
hypothalamus	UBERON:0001898	45.50	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.32	gold quality
nucleus accumbens	UBERON:0001882	45.27	gold quality
endometrium	UBERON:0001295	45.06	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.