NTM-IT

Summary

NTM-IT (NTM intronic transcript, HGNC:41437) is a long non-coding RNA gene on chromosome 11q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41437
Approved symbol	NTM-IT
Name	NTM intronic transcript
Location	11q25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238262
Ensembl biotype	lncRNA
Entrez	100874281
RNAcentral	URS000075A01A — lncRNA, 764 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000421651

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421651 — 2 exons

Exon	Start	End
ENSE00001746279	132284302	132284358
ENSE00001759575	132284766	132285081

Expression profiles

Bgee: expression breadth broad, 58 present calls, max score 70.15.

Top tissues by expression

58 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.15	gold quality
liver	UBERON:0002107	68.50	silver quality
urinary bladder	UBERON:0001255	60.73	silver quality
islet of Langerhans	UBERON:0000006	60.46	gold quality
blood	UBERON:0000178	60.04	gold quality
tonsil	UBERON:0002372	59.10	silver quality
monocyte	CL:0000576	55.82	gold quality
prefrontal cortex	UBERON:0000451	53.82	gold quality
primary visual cortex	UBERON:0002436	53.47	gold quality
lung	UBERON:0002048	53.40	gold quality
omental fat pad	UBERON:0010414	52.15	gold quality
corpus callosum	UBERON:0002336	51.49	silver quality
gastrocnemius	UBERON:0001388	50.07	gold quality
cerebellum	UBERON:0002037	50.07	gold quality
left lobe of thyroid gland	UBERON:0001120	50.04	gold quality
cerebellar cortex	UBERON:0002129	49.86	gold quality
cerebellar hemisphere	UBERON:0002245	49.68	gold quality
superior frontal gyrus	UBERON:0002661	49.52	gold quality
kidney	UBERON:0002113	48.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	48.09	silver quality
brain	UBERON:0000955	47.40	gold quality
small intestine	UBERON:0002108	47.39	silver quality
lower esophagus muscularis layer	UBERON:0035833	46.58	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.29	gold quality
skin of leg	UBERON:0001511	46.23	gold quality
Ammon’s horn	UBERON:0001954	46.21	gold quality
body of stomach	UBERON:0001161	46.19	gold quality
anterior cingulate cortex	UBERON:0009835	46.05	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.92	gold quality
upper lobe of left lung	UBERON:0008952	45.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.