NUP107-DT

Summary

NUP107-DT (NUP107 divergent transcript, HGNC:55587) is a long non-coding RNA gene on chromosome 12q15.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55587
Approved symbol	NUP107-DT
Name	NUP107 divergent transcript
Location	12q15
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000247363
Ensembl biotype	lncRNA
Entrez	100507250
RNAcentral	URS000075B50B — lncRNA, 2481 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000433116, ENST00000500695, ENST00000502102, ENST00000690517, ENST00000847662, ENST00000847663, ENST00000847664

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000433116 — 2 exons

Exon	Start	End
ENSE00001984756	68686737	68686837
ENSE00002267394	68685569	68686017

Expression profiles

Bgee: expression breadth ubiquitous, 154 present calls, max score 84.82.

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.82	gold quality
sural nerve	UBERON:0015488	83.40	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.79	gold quality
sperm	CL:0000019	78.58	gold quality
left testis	UBERON:0004533	74.29	gold quality
right testis	UBERON:0004534	73.44	gold quality
testis	UBERON:0000473	72.91	gold quality
bone marrow cell	CL:0002092	69.06	silver quality
granulocyte	CL:0000094	67.55	gold quality
islet of Langerhans	UBERON:0000006	64.63	gold quality
buccal mucosa cell	CL:0002336	64.54	silver quality
ventricular zone	UBERON:0003053	63.79	gold quality
right uterine tube	UBERON:0001302	62.55	gold quality
ganglionic eminence	UBERON:0004023	62.18	gold quality
secondary oocyte	CL:0000655	61.81	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.31	gold quality
lymph node	UBERON:0000029	61.21	gold quality
oocyte	CL:0000023	60.94	gold quality
adult organism	UBERON:0007023	60.12	gold quality
cortical plate	UBERON:0005343	60.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.88	gold quality
adrenal tissue	UBERON:0018303	59.62	gold quality
colonic epithelium	UBERON:0000397	59.55	silver quality
leukocyte	CL:0000738	59.29	gold quality
monocyte	CL:0000576	58.55	gold quality
bronchial epithelial cell	CL:0002328	57.32	silver quality
myocardium	UBERON:0002349	57.15	gold quality
right adrenal gland cortex	UBERON:0035827	56.85	gold quality
calcaneal tendon	UBERON:0003701	56.83	gold quality
spleen	UBERON:0002106	56.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.