OBSCN-AS1

Summary

OBSCN-AS1 (OBSCN antisense RNA 1, HGNC:32047) is a long non-coding RNA gene on chromosome 1q42.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32047
Approved symbol	OBSCN-AS1
Name	OBSCN antisense RNA 1
Location	1q42.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ31994
Ensembl gene	ENSG00000162913
Ensembl biotype	lncRNA
Entrez	574407
RNAcentral	URS0000759D22 — lncRNA, 2884 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000295012, ENST00000337335, ENST00000472613, ENST00000656820, ENST00000657820, ENST00000658152, ENST00000660656

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000295012 — 2 exons

Exon	Start	End
ENSE00001442461	228203506	228204155
ENSE00002145074	228213422	228213660

Expression profiles

Bgee: expression breadth ubiquitous, 159 present calls, max score 89.21.

FANTOM5 (CAGE): breadth broad, TPM avg 0.9673 / max 25.2166, expressed in 551 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
17822	0.7682	462
17823	0.1990	86

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
caudate nucleus	UBERON:0001873	89.21	gold quality
putamen	UBERON:0001874	88.96	gold quality
nucleus accumbens	UBERON:0001882	87.10	gold quality
right hemisphere of cerebellum	UBERON:0014890	78.50	gold quality
cerebellar hemisphere	UBERON:0002245	77.83	gold quality
cerebellar cortex	UBERON:0002129	77.60	gold quality
adenohypophysis	UBERON:0002196	77.13	gold quality
pituitary gland	UBERON:0000007	76.83	gold quality
buccal mucosa cell	CL:0002336	76.54	gold quality
cerebellum	UBERON:0002037	75.09	gold quality
left lobe of thyroid gland	UBERON:0001120	72.66	gold quality
thyroid gland	UBERON:0002046	71.41	gold quality
right lobe of thyroid gland	UBERON:0001119	71.28	gold quality
cortical plate	UBERON:0005343	70.82	gold quality
right uterine tube	UBERON:0001302	70.63	gold quality
bone marrow cell	CL:0002092	70.35	silver quality
colonic epithelium	UBERON:0000397	70.18	gold quality
right frontal lobe	UBERON:0002810	69.63	gold quality
right lung	UBERON:0002167	69.51	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	68.31	gold quality
metanephros cortex	UBERON:0010533	68.14	gold quality
ganglionic eminence	UBERON:0004023	68.13	gold quality
anterior cingulate cortex	UBERON:0009835	68.12	gold quality
stromal cell of endometrium	CL:0002255	67.97	gold quality
spleen	UBERON:0002106	67.51	gold quality
forebrain	UBERON:0001890	67.23	gold quality
brain	UBERON:0000955	67.15	gold quality
minor salivary gland	UBERON:0001830	66.76	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.35	gold quality
sural nerve	UBERON:0015488	65.89	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.