OGFR-AS1

Summary

OGFR-AS1 (OGFR antisense RNA 1, HGNC:40724) is a long non-coding RNA gene on chromosome 20q13.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40724
Approved symbol	OGFR-AS1
Name	OGFR antisense RNA 1
Location	20q13.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229873
Ensembl biotype	lncRNA
Entrez	101409261
RNAcentral	URS000075C106 — lncRNA, 684 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000431361, ENST00000764151, ENST00000764152, ENST00000764153, ENST00000764154

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431361 — 3 exons

Exon	Start	End
ENSE00001612487	62802015	62802109
ENSE00004120882	62805468	62805971
ENSE00004120883	62800601	62801079

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 89.27.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0228 / max 2.7284, expressed in 6 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
188304	0.0228	6

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.27	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.17	gold quality
right lobe of liver	UBERON:0001114	79.46	gold quality
bone marrow cell	CL:0002092	72.82	silver quality
liver	UBERON:0002107	71.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	70.42	gold quality
blood	UBERON:0000178	69.92	gold quality
monocyte	CL:0000576	68.33	gold quality
tibial nerve	UBERON:0001323	67.56	gold quality
mucosa of stomach	UBERON:0001199	67.40	gold quality
granulocyte	CL:0000094	67.07	gold quality
thyroid gland	UBERON:0002046	66.42	gold quality
left lobe of thyroid gland	UBERON:0001120	66.38	gold quality
right lobe of thyroid gland	UBERON:0001119	65.70	gold quality
metanephros cortex	UBERON:0010533	65.67	gold quality
right frontal lobe	UBERON:0002810	65.24	gold quality
sural nerve	UBERON:0015488	64.62	silver quality
right coronary artery	UBERON:0001625	64.07	gold quality
right lung	UBERON:0002167	64.04	gold quality
upper lobe of left lung	UBERON:0008952	63.94	gold quality
right uterine tube	UBERON:0001302	63.45	gold quality
spleen	UBERON:0002106	63.27	gold quality
left ovary	UBERON:0002119	62.96	gold quality
subcutaneous adipose tissue	UBERON:0002190	62.86	gold quality
popliteal artery	UBERON:0002250	62.86	gold quality
Brodmann (1909) area 9	UBERON:0013540	62.82	gold quality
tibial artery	UBERON:0007610	62.81	gold quality
pituitary gland	UBERON:0000007	62.62	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.61	gold quality
right ovary	UBERON:0002118	62.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.