OXA1L-DT

Summary

OXA1L-DT (OXA1L divergent transcript, HGNC:55448) is a long non-coding RNA gene on chromosome 14q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55448
Approved symbol	OXA1L-DT
Name	OXA1L divergent transcript
Location	14q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258458
Ensembl biotype	lncRNA
Entrez	105370404
RNAcentral	URS0002A21DF4 — lncRNA, 2145 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 15 lncRNA, 2 retained_intron

ENST00000553792, ENST00000554194, ENST00000554730, ENST00000554857, ENST00000650620, ENST00000653926, ENST00000672139, ENST00000807456, ENST00000807457, ENST00000807458, ENST00000807459, ENST00000807460, ENST00000807461, ENST00000807462, ENST00000807463, ENST00000807464, ENST00000807465

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553792 — 5 exons

Exon	Start	End
ENSE00002439975	22717096	22717217
ENSE00002470073	22706279	22706415
ENSE00002492094	22766424	22766560
ENSE00002503056	22762025	22762143
ENSE00002514425	22702993	22703011

Expression profiles

Bgee: expression breadth ubiquitous, 240 present calls, max score 97.66.

Top tissues by expression

271 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	97.66	gold quality
pancreatic ductal cell	CL:0002079	91.80	silver quality
tendon of biceps brachii	UBERON:0008188	89.09	gold quality
sperm	CL:0000019	83.09	silver quality
male germ cell	CL:0000015	82.74	silver quality
mucosa of urinary bladder	UBERON:0001259	81.90	silver quality
gluteal muscle	UBERON:0002000	81.25	silver quality
cervix squamous epithelium	UBERON:0006922	79.92	gold quality
cerebellar vermis	UBERON:0004720	79.42	silver quality
medial globus pallidus	UBERON:0002477	78.98	silver quality
globus pallidus	UBERON:0001875	78.62	silver quality
inferior vagus X ganglion	UBERON:0005363	78.49	gold quality
endothelial cell	CL:0000115	78.25	silver quality
oviduct epithelium	UBERON:0004804	78.20	silver quality
thymus	UBERON:0002370	78.12	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.71	gold quality
olfactory bulb	UBERON:0002264	77.47	silver quality
pylorus	UBERON:0001166	77.44	gold quality
nipple	UBERON:0002030	77.27	silver quality
cardia of stomach	UBERON:0001162	77.17	silver quality
subthalamic nucleus	UBERON:0001906	76.95	gold quality
ventral tegmental area	UBERON:0002691	76.93	gold quality
renal medulla	UBERON:0000362	76.41	gold quality
lateral globus pallidus	UBERON:0002476	76.36	silver quality
epithelium of nasopharynx	UBERON:0001951	76.33	silver quality
type B pancreatic cell	CL:0000169	76.31	gold quality
dorsal plus ventral thalamus	UBERON:0001897	76.29	silver quality
trachea	UBERON:0003126	76.22	silver quality
secondary oocyte	CL:0000655	76.00	gold quality
substantia nigra pars reticulata	UBERON:0001966	75.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.