OXGR1
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Also known as P2RY15P2Y15aKGR
Summary
OXGR1 (oxoglutarate receptor 1, HGNC:4531) is a protein-coding gene on chromosome 13q32.1, encoding 2-oxoglutarate receptor 1 (Q96P68). G protein-coupled receptor for dicarboxylates and amino dicarboxylates.
This gene encodes a G protein-coupled receptor (GPCR) that belongs to the oxoglutarate receptor family within the GPCR superfamily. The encoded protein is activated by the citric acid intermediate, oxoglutarate, as well as several cysteinyl leukotrienes, including leukotrienes E4, C4 and D4, which are implicated in many inflammatory disorders. In mice, a knock-out of this gene leads to middle ear inflammation, changes in the mucosal epithelium, and an increase in fluid behind the eardrum, and is associated with hearing loss. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 27199 — RefSeq curated summary.
At a glance
- Gene–disease (curated): nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis (Moderate, GenCC)
- GWAS associations: 2
- Clinical variants (ClinVar): 69 total — 2 pathogenic, 2 likely-pathogenic
- Phenotypes (HPO): 9
- Druggable target: yes
- MANE Select transcript:
NM_001346194
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:4531 |
| Approved symbol | OXGR1 |
| Name | oxoglutarate receptor 1 |
| Location | 13q32.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | P2RY15, P2Y15, aKGR |
| Ensembl gene | ENSG00000165621 |
| Ensembl biotype | protein_coding |
| OMIM | 606922 |
| Entrez | 27199 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 7 protein_coding
ENST00000298440, ENST00000541038, ENST00000541518, ENST00000543457, ENST00000875258, ENST00000875259, ENST00000875260
RefSeq mRNA: 5 — MANE Select: NM_001346194
NM_001346194, NM_001346195, NM_001346196, NM_001346197, NM_080818
CCDS: CCDS9482
Canonical transcript exons
ENST00000541038 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001365271 | 96989758 | 96989809 |
| ENSE00002233109 | 96985713 | 96987833 |
| ENSE00002287897 | 96994298 | 96994476 |
| ENSE00002306171 | 96992422 | 96992572 |
Expression profiles
Bgee: expression breadth ubiquitous, 141 present calls, max score 72.16.
Top tissues by expression
233 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| islet of Langerhans | UBERON:0000006 | 72.16 | gold quality |
| calcaneal tendon | UBERON:0003701 | 68.97 | gold quality |
| metanephros cortex | UBERON:0010533 | 67.87 | gold quality |
| minor salivary gland | UBERON:0001830 | 66.18 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 65.89 | gold quality |
| rectum | UBERON:0001052 | 65.74 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 65.32 | gold quality |
| skin of leg | UBERON:0001511 | 64.65 | gold quality |
| vermiform appendix | UBERON:0001154 | 64.41 | gold quality |
| right uterine tube | UBERON:0001302 | 63.85 | gold quality |
| mouth mucosa | UBERON:0003729 | 62.83 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 62.73 | gold quality |
| skin of abdomen | UBERON:0001416 | 62.61 | gold quality |
| ventricular zone | UBERON:0003053 | 62.43 | gold quality |
| zone of skin | UBERON:0000014 | 61.13 | gold quality |
| transverse colon | UBERON:0001157 | 60.57 | gold quality |
| prefrontal cortex | UBERON:0000451 | 59.90 | gold quality |
| metanephros | UBERON:0000081 | 59.74 | gold quality |
| cortex of kidney | UBERON:0001225 | 59.57 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 59.38 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 59.30 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 59.21 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 59.19 | gold quality |
| caecum | UBERON:0001153 | 59.15 | gold quality |
| tendon | UBERON:0000043 | 58.58 | gold quality |
| esophagus mucosa | UBERON:0002469 | 58.42 | gold quality |
| left uterine tube | UBERON:0001303 | 58.40 | gold quality |
| kidney | UBERON:0002113 | 58.15 | gold quality |
| spinal cord | UBERON:0002240 | 57.56 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 56.90 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 2.73 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
73 targeting OXGR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-4682 | 100.00 | 68.89 | 1258 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-MIR-3617-3P | 99.98 | 67.86 | 918 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AM-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AQ-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-12133 | 99.92 | 71.82 | 2006 |
| HSA-MIR-1271-5P | 99.91 | 71.99 | 1972 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
Literature-anchored findings (GeneRIF, showing 6)
- P2Y15 is a cell surface receptor for AMP and adenosine (PMID:15001573)
- Down-Regulation of OXGR1 through DNA Methylation is associated with hepatocellular carcinoma. (PMID:19760608)
- GPR99 was mostly expressed in vascular smooth muscle cells of the nasal mucosa. There was no difference in GPR99 protein levels between allergic and non-allergic nasal mucosa. (PMID:27324180)
- Exercise-induced alpha-ketoglutaric acid stimulates muscle hypertrophy and fat loss through OXGR1-dependent adrenal activation. (PMID:32104923)
- Changes in expression of orphan receptors GPR99 and GPR107 during the development and establishment of hypertension in spontaneously hypertensive rats. (PMID:33121311)
- OXGR1 is a candidate disease gene for human calcium oxalate nephrolithiasis. (PMID:36571463)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | oxgr1b | ENSDARG00000029803 |
| danio_rerio | oxgr1a.1 | ENSDARG00000033684 |
| danio_rerio | oxgr1a.3 | ENSDARG00000040247 |
| danio_rerio | oxgr1a.2 | ENSDARG00000078743 |
| mus_musculus | Oxgr1 | ENSMUSG00000044819 |
| rattus_norvegicus | Oxgr1 | ENSRNOG00000075479 |
Paralogs (15): GPR31 (ENSG00000120436), GPR42 (ENSG00000126251), FFAR2 (ENSG00000126262), FFAR1 (ENSG00000126266), OXER1 (ENSG00000162881), P2RY1 (ENSG00000169860), P2RY6 (ENSG00000171631), GPR82 (ENSG00000171657), P2RY2 (ENSG00000175591), HCAR2 (ENSG00000182782), FFAR3 (ENSG00000185897), P2RY4 (ENSG00000186912), HCAR1 (ENSG00000196917), SUCNR1 (ENSG00000198829), HCAR3 (ENSG00000255398)
Protein
Protein identifiers
2-oxoglutarate receptor 1 — Q96P68 (reviewed: Q96P68)
Alternative names: Alpha-ketoglutarate receptor 1, G-protein coupled receptor 80, G-protein coupled receptor 99, P2Y purinoceptor 15, P2Y-like GPCR, P2Y-like nucleotide receptor
All UniProt accessions (4): B2R986, F5H3P1, F5H6U5, Q96P68
UniProt curated annotations — full annotation on UniProt →
Function. G protein-coupled receptor for dicarboxylates and amino dicarboxylates. Receptor for itaconate, a metabolite produced by myeloid lineages. In the respiratory epithelium, couples the binding of itaconate to the activation of GNA11 and downstream intracellular Ca(2+) release, leading to mucocilliary clearance of airborne pathogens. Receptor for leukotriene E4 (LTE4) produced by mast cells upon allergic inflammation. Binds with high affinity to LTE4 and elicits mucin release from pulmonary epithelium in response to airborne fungi allergens. Regulates mucin-producing goblet cell homeostasis. Receptor for alpha-ketoglutarate produced by proximal tubule renal cells upon metabolic alkalosis. In an intrarenal paracrine signaling pathway, binds alpha-ketoglutarate and drives transepithelial salt reabsorption and bicarbonate secretion by SLC26A4/pendrin-positive intercalated cells.
Subcellular location. Cell membrane.
Tissue specificity. Detected in kidney and, to a lower extent, in placenta. Not detected in brain tissues including the frontal cortex, caudate putamen, thalamus, hypothalamus, hippocampus or pons.
Disease relevance. Nephrolithiasis, calcium oxalate, 2, with nephrocalcinosis (CAON2) [MIM:620374] A form of nephrolithiasis, a condition in which urinary supersaturation leads to calcium oxalate stone formation in the urinary system. CAON2 is an autosomal dominant form often resultings in nephrocalcinosis. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the G-protein coupled receptor 1 family.
RefSeq proteins (5): NP_001333123, NP_001333124, NP_001333125, NP_001333126, NP_543008 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (40 total): mutagenesis site 12, topological domain 8, transmembrane region 7, sequence variant 5, glycosylation site 4, sequence conflict 2, chain 1, disulfide bond 1
Structure
Experimental structures (PDB)
11 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 9VMO | ELECTRON MICROSCOPY | 2.4 |
| 9VMP | ELECTRON MICROSCOPY | 2.5 |
| 9VMN | ELECTRON MICROSCOPY | 2.6 |
| 9UXN | ELECTRON MICROSCOPY | 2.7 |
| 9VO2 | ELECTRON MICROSCOPY | 2.7 |
| 8YYX | ELECTRON MICROSCOPY | 2.84 |
| 9UXQ | ELECTRON MICROSCOPY | 2.89 |
| 9UK2 | ELECTRON MICROSCOPY | 2.9 |
| 9UXP | ELECTRON MICROSCOPY | 2.9 |
| 9UXO | ELECTRON MICROSCOPY | 2.97 |
| 8YYW | ELECTRON MICROSCOPY | 3.16 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96P68-F1 | 86.61 | 0.60 |
Antibody-complex structures (SAbDab): 1 — 8YYW
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (1): 106–183
Glycosylation sites (4): 10, 23, 176, 179
Mutagenesis-validated functional residues (12):
| Position | Phenotype |
|---|---|
| 106 | loss of itaconate-induced intracellular calcium response. |
| 107 | slightly decreases itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 110 | loss of itaconate-induced receptor endocytosis and intracellular calcium response. |
| 114 | markedly impairs itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 118 | markedly impairs itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 121 | markedly impairs itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 258 | loss of itaconate-induced intracellular calcium response. |
| 261 | loss of itaconate-induced receptor endocytosis and intracellular calcium response. |
| 264 | slightly decreases itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 265 | loss of itaconate-induced intracellular calcium response. |
| 285 | markedly impairs itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
| 288 | markedly impairs itaconate- or alpha-ketoglutarate-induced intracellular calcium response. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-418594 | G alpha (i) signalling events |
MSigDB gene sets: 78 (showing top):
MODULE_255, MODULE_317, GOBP_DEFENSE_RESPONSE_TO_OTHER_ORGANISM, GOBP_PHOSPHOLIPASE_C_ACTIVATING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, YNGTTNNNATT_UNKNOWN, chr13q32, MODULE_69, REACTOME_CLASS_A_1_RHODOPSIN_LIKE_RECEPTORS, GOMF_TRANSMEMBRANE_SIGNALING_RECEPTOR_ACTIVITY, GOMF_G_PROTEIN_COUPLED_RECEPTOR_ACTIVITY, GOBP_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, MODULE_37, FOXN3_TARGET_GENES, LMTK3_TARGET_GENES, SIX1_TARGET_GENES
GO Biological Process (6): G protein-coupled receptor signaling pathway (GO:0007186), phospholipase C-activating G protein-coupled receptor signaling pathway (GO:0007200), innate immune response (GO:0045087), immune system process (GO:0002376), signal transduction (GO:0007165), phospholipase C-activating serotonin receptor signaling pathway (GO:0007208)
GO Molecular Function (2): G protein-coupled receptor activity (GO:0004930), signaling receptor activity (GO:0038023)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| GPCR ligand binding | 1 |
| GPCR downstream signalling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 2 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| phospholipase C activator activity | 1 |
| immune response | 1 |
| defense response to symbiont | 1 |
| biological_process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| Gq/11-coupled serotonin receptor activity | 1 |
| phospholipase C-activating G protein-coupled receptor signaling pathway | 1 |
| G protein-coupled serotonin receptor signaling pathway | 1 |
| transmembrane signaling receptor activity | 1 |
| molecular transducer activity | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
518 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| OXGR1 | ALDH18A1 | P54886 | 735 |
| OXGR1 | LTC4S | Q16873 | 588 |
| OXGR1 | CYSLTR1 | Q9Y271 | 500 |
| OXGR1 | CYSLTR2 | Q9NS75 | 488 |
| OXGR1 | GPR17 | Q13304 | 487 |
| OXGR1 | P2RY12 | Q9H244 | 477 |
| OXGR1 | SLC26A4 | O43511 | 419 |
| OXGR1 | LTB4R2 | Q9NPC1 | 406 |
| OXGR1 | HCAR1 | Q9BXC0 | 381 |
| OXGR1 | LTA4H | P09960 | 355 |
| OXGR1 | MCOLN2 | Q8IZK6 | 350 |
| OXGR1 | GABRA3 | P34903 | 326 |
| OXGR1 | EMB | Q6PCB8 | 325 |
| OXGR1 | ADGRF1 | Q5T601 | 315 |
| OXGR1 | SCNN1D | P51172 | 314 |
IntAct
8 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| OXGR1 | RAMP1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| OXGR1 | RAMP2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | OXGR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| OXGR1 | RAMP3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP2 | OXGR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (2): OXGR1 (Positive Genetic), OXGR1 (Affinity Capture-MS)
ESM2 similar proteins: A7YY44, B0UXR0, B5X337, D4A4Q2, D4A7K7, O00254, O00398, O08675, P25116, P26824, P30558, P34996, P47749, P47900, P48042, P49019, P49650, P49651, P49652, P55085, P55086, P56488, P59902, P60019, Q00991, Q2HJA4, Q2NNR5, Q3SAG9, Q3U507, Q3U6B2, Q58D85, Q5ZI82, Q6IYF8, Q6XCF2, Q6Y1R5, Q8BLG2, Q920A1, Q920E1, Q924T8, Q924T9
Diamond homologs: A1A5S3, E9QJ73, O08707, P29755, P32248, P33396, P49220, P79785, P97266, Q14330, Q149R9, Q16581, Q28553, Q3T0E9, Q3ZC80, Q4R613, Q58D85, Q5REI5, Q6IYF8, Q6TAC8, Q6Y1R5, Q8K1Z6, Q8NGA4, Q8VIH9, Q920E1, Q924T8, Q95N02, Q96P68, Q99PE3, Q9H1C0, A0A4W3GG95, A5PLE7, A7YY44, D4A7K7, E7F7V7, F1MV99, O00254, O08565, O08858, O18982
SIGNOR signaling
9 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| OXGR1 | “up-regulates activity” | GNAS | binding |
| OXGR1 | “up-regulates activity” | GNAL | binding |
| OXGR1 | “up-regulates activity” | GNAI1 | binding |
| OXGR1 | “up-regulates activity” | GNAI3 | binding |
| OXGR1 | “up-regulates activity” | GNAO1 | binding |
| OXGR1 | “up-regulates activity” | GNAZ | binding |
| OXGR1 | “up-regulates activity” | GNAQ | binding |
| OXGR1 | “up-regulates activity” | GNA14 | binding |
| “2-oxoglutaric acid” | “up-regulates activity” | OXGR1 | “chemical activation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
69 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 2 |
| Uncertain significance | 60 |
| Likely benign | 3 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2502147 | NM_001346194.2(OXGR1):c.166del (p.Ser56fs) | Pathogenic |
| 2502149 | NM_001346194.2(OXGR1):c.649T>C (p.Cys217Arg) | Pathogenic |
| 2502146 | NM_001346194.2(OXGR1):c.371T>G (p.Leu124Arg) | Likely pathogenic |
| 3359195 | NM_001346194.2(OXGR1):c.136G>A (p.Val46Met) | Likely pathogenic |
SpliceAI
737 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 13:96987773:CATCT:C | acceptor_gain | 1.0000 |
| 13:96987777:T:C | acceptor_gain | 1.0000 |
| 13:96987777:T:TC | acceptor_gain | 1.0000 |
| 13:96992420:A:AC | donor_gain | 1.0000 |
| 13:96992421:C:CC | donor_gain | 1.0000 |
| 13:96992421:CA:C | donor_gain | 1.0000 |
| 13:96992428:AG:A | donor_gain | 1.0000 |
| 13:96987781:A:T | acceptor_gain | 0.9900 |
| 13:96987830:CTCG:C | acceptor_gain | 0.9900 |
| 13:96988848:G:C | donor_gain | 0.9900 |
| 13:96989805:TTACC:T | acceptor_gain | 0.9900 |
| 13:96989808:CC:C | acceptor_gain | 0.9900 |
| 13:96989809:CC:C | acceptor_gain | 0.9900 |
| 13:96992421:CAA:C | donor_gain | 0.9900 |
| 13:96992421:CAAT:C | donor_gain | 0.9900 |
| 13:96992421:CAATT:C | donor_gain | 0.9900 |
| 13:96992457:G:C | donor_gain | 0.9900 |
| 13:96992571:TT:T | acceptor_gain | 0.9900 |
| 13:96994294:TCACC:T | donor_loss | 0.9900 |
| 13:96994295:CACCT:C | donor_loss | 0.9900 |
| 13:96994296:ACC:A | donor_loss | 0.9900 |
| 13:96994297:C:CA | donor_loss | 0.9900 |
| 13:96987776:C:CC | acceptor_gain | 0.9800 |
| 13:96987780:C:CT | acceptor_gain | 0.9800 |
| 13:96987834:C:CC | acceptor_gain | 0.9800 |
| 13:96989806:TACCC:T | acceptor_loss | 0.9800 |
| 13:96989807:ACCC:A | acceptor_loss | 0.9800 |
| 13:96989808:CCCT:C | acceptor_loss | 0.9800 |
| 13:96989811:T:A | acceptor_loss | 0.9800 |
| 13:96992573:C:CC | acceptor_gain | 0.9800 |
AlphaMissense
400 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 13:96987639:C:G | G41R | 0.940 |
| 13:96987621:C:G | G47R | 0.932 |
| 13:96987621:C:T | G47R | 0.932 |
| 13:96987611:C:T | G50D | 0.930 |
| 13:96987596:A:T | I55K | 0.927 |
| 13:96987607:A:C | N51K | 0.922 |
| 13:96987607:A:T | N51K | 0.922 |
| 13:96987620:C:T | G47E | 0.913 |
| 13:96987638:C:T | G41D | 0.896 |
| 13:96987596:A:C | I55R | 0.880 |
| 13:96987612:C:G | G50R | 0.878 |
| 13:96987688:G:C | C24W | 0.837 |
| 13:96987653:A:G | L36P | 0.835 |
| 13:96987628:G:C | F44L | 0.832 |
| 13:96987628:G:T | F44L | 0.832 |
| 13:96987630:A:G | F44L | 0.832 |
| 13:96987609:T:C | N51D | 0.817 |
| 13:96987599:A:T | V54E | 0.806 |
| 13:96987605:G:T | A52E | 0.799 |
| 13:96987657:A:C | Y35D | 0.799 |
| 13:96987623:A:T | V46E | 0.797 |
| 13:96987650:G:T | P37H | 0.797 |
| 13:96987653:A:T | L36H | 0.794 |
| 13:96987626:A:C | L45R | 0.785 |
| 13:96987664:C:A | K32N | 0.783 |
| 13:96987664:C:G | K32N | 0.783 |
| 13:96987606:C:G | A52P | 0.779 |
| 13:96987650:G:C | P37R | 0.765 |
| 13:96987689:C:G | C24S | 0.759 |
| 13:96987690:A:T | C24S | 0.759 |
dbSNP variants (sampled 300 via entrez): RS1000161936 (13:96996012 T>C), RS1000193211 (13:96993270 G>A), RS1000215024 (13:96996291 A>G), RS1000224163 (13:96993158 G>A), RS1000564950 (13:96994143 C>T), RS1001100177 (13:96988872 T>C), RS1001104599 (13:96990458 A>G,T), RS1001427261 (13:96989131 G>A), RS1001542832 (13:96991110 T>A), RS1002173185 (13:96996650 T>A), RS1002355872 (13:96993734 C>T), RS1002427896 (13:96993529 A>G), RS1002708006 (13:96988373 T>A), RS1002758206 (13:96988069 G>GA), RS1002930030 (13:96986151 C>T)
Disease associations
OMIM: gene MIM:606922 | disease phenotypes: MIM:620374
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis | Moderate | Autosomal dominant |
Mondo (1): nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis (MONDO:0958191)
Orphanet (0):
HPO phenotypes
9 total (9 of 9 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000121 | Nephrocalcinosis |
| HP:0000787 | Nephrolithiasis |
| HP:0003159 | Hyperoxaluria |
| HP:0003584 | Late onset |
| HP:0003596 | Middle age onset |
| HP:0003621 | Juvenile onset |
| HP:0011462 | Young adult onset |
| HP:0012405 | Hypocitraturia |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004524_4 | Energy expenditure (24h) | 4.000000e-06 |
| GCST008661_1 | Lung function in heavy smokers (high FEV1 vs average FEV1) | 1.000000e-07 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004314 | forced expiratory volume |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2150840 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Oxoglutarate receptor
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| [3H]LTE4 | Agonist | 8.6 | pKd |
| α-ketoglutaric acid | Full agonist | 4.49 | pEC50 |
ChEMBL bioactivities
3 potent at pChembl≥5 of 3 total, top 3 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 5.70 | IC50 | 2000 | nM | CHEMBL2153446 |
| 5.30 | IC50 | 5000 | nM | CHEMBL2153586 |
| 5.16 | IC50 | 7000 | nM | CHEMBL2153440 |
PubChem BioAssay actives
3 with measured affinity, of 10 total; 3 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-[(1S)-1-[4-(3-chlorophenyl)phenyl]ethyl]-4-(1,8-naphthyridin-2-yl)butanamide | 692081: Antagonist activity at human GPR99 receptor expressed in CHO-K1 cells co-expressing Galpha and Gqi5 G-protein assessed as inhibition of succinate-induced increase in intracellular calcium level at by FLIPR assay | ic50 | 2.0000 | uM |
| 2-[4-(3-chlorophenyl)phenyl]-5-[3-(1,8-naphthyridin-2-yl)propyl]-1,3,4-oxadiazole | 692081: Antagonist activity at human GPR99 receptor expressed in CHO-K1 cells co-expressing Galpha and Gqi5 G-protein assessed as inhibition of succinate-induced increase in intracellular calcium level at by FLIPR assay | ic50 | 5.0000 | uM |
| N-[[4-(3-chlorophenyl)phenyl]methyl]-4-(1,8-naphthyridin-2-yl)butanamide | 692081: Antagonist activity at human GPR99 receptor expressed in CHO-K1 cells co-expressing Galpha and Gqi5 G-protein assessed as inhibition of succinate-induced increase in intracellular calcium level at by FLIPR assay | ic50 | 7.0000 | uM |
CTD chemical–gene interactions
17 total (human), top 17 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases expression, increases methylation | 2 |
| Aflatoxin B1 | decreases methylation, increases expression | 2 |
| sodium arsenite | decreases expression | 1 |
| 2-bromopalmitate | decreases reaction, increases abundance, increases palmitoylation | 1 |
| ferrous chloride | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Cadmium | decreases reaction, increases abundance, increases palmitoylation | 1 |
| Ketoglutaric Acids | increases activity | 1 |
| Methotrexate | increases expression | 1 |
| Nickel | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Valproic Acid | decreases methylation | 1 |
| 8-Bromo Cyclic Adenosine Monophosphate | increases expression | 1 |
| Cadmium Chloride | decreases reaction, increases abundance, increases palmitoylation | 1 |
| Okadaic Acid | increases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 2 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2155424 | Functional | Antagonist activity at human GPR99 receptor expressed in CHO-K1 cells co-expressing Galpha and Gqi5 G-protein assessed as inhibition of succinate-induced increase in intracellular calcium level at by FLIPR assay | Discovery of a potent and selective small molecule hGPR91 antagonist. — Bioorg Med Chem Lett |
| CHEMBL4883562 | Binding | PRESTO-Tango GPCRome screening (OXGR1) | Data for DCP probe UCSF924 |
Cellosaurus cell lines
3 cell lines: 2 spontaneously immortalized cell line, 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_H490 | CHO-K1/OXGR1/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KU70 | U2OS OXGR1 Gq | Cancer cell line | Female |
| CVCL_KY72 | PathHunter CHO-K1 OXGR1 beta-arrestin | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): nephrolithiasis, calcium oxalate, 2, with or without nephrocalcinosis