PABPC5-AS1

Summary

PABPC5-AS1 (PABPC5 antisense RNA 1, HGNC:31845) is a long non-coding RNA gene on chromosome Xq21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31845
Approved symbol	PABPC5-AS1
Name	PABPC5 antisense RNA 1
Location	Xq21.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	OTTHUMG00000021960
Ensembl gene	ENSG00000234161
Ensembl biotype	lncRNA
Entrez	102724167
RNAcentral	URS000075D5CA — lncRNA, 401 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000456187, ENST00000807081, ENST00000807082, ENST00000807083, ENST00000807084, ENST00000807085, ENST00000807086, ENST00000807087, ENST00000807088, ENST00000807089, ENST00000807090, ENST00000807091

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000456187 — 4 exons

Exon	Start	End
ENSE00001601939	91418325	91418393
ENSE00001666419	91434903	91434999
ENSE00001765390	91414878	91415049
ENSE00001794268	91418784	91418871

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 94.48.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	94.48	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.71	gold quality
corpus callosum	UBERON:0002336	81.48	gold quality
cortical plate	UBERON:0005343	75.38	gold quality
colonic epithelium	UBERON:0000397	71.90	gold quality
sural nerve	UBERON:0015488	70.76	gold quality
ganglionic eminence	UBERON:0004023	70.45	gold quality
adrenal tissue	UBERON:0018303	67.43	gold quality
skeletal muscle tissue	UBERON:0001134	65.95	silver quality
gall bladder	UBERON:0002110	64.70	gold quality
urinary bladder	UBERON:0001255	60.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.62	gold quality
prefrontal cortex	UBERON:0000451	60.16	gold quality
placenta	UBERON:0001987	58.65	gold quality
ovary	UBERON:0000992	58.51	gold quality
muscle of leg	UBERON:0001383	58.32	gold quality
primary visual cortex	UBERON:0002436	58.10	gold quality
left ovary	UBERON:0002119	57.89	gold quality
lymph node	UBERON:0000029	57.61	gold quality
tonsil	UBERON:0002372	57.42	silver quality
islet of Langerhans	UBERON:0000006	57.19	gold quality
superior frontal gyrus	UBERON:0002661	56.72	gold quality
monocyte	CL:0000576	56.48	gold quality
vermiform appendix	UBERON:0001154	55.77	gold quality
right adrenal gland cortex	UBERON:0035827	55.58	gold quality
myometrium	UBERON:0001296	55.52	gold quality
adrenal gland	UBERON:0002369	55.43	gold quality
kidney	UBERON:0002113	55.42	gold quality
liver	UBERON:0002107	54.92	gold quality
popliteal artery	UBERON:0002250	54.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.