PACRG-AS2

Summary

PACRG-AS2 (PACRG antisense RNA 2, HGNC:40871) is a long non-coding RNA gene on chromosome 6q26.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40871
Approved symbol	PACRG-AS2
Name	PACRG antisense RNA 2
Location	6q26
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225437
Ensembl biotype	lncRNA
Entrez	101929239
RNAcentral	URS000044CFEA — lncRNA, 1300 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000418665, ENST00000433489, ENST00000440924, ENST00000653179

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000418665 — 4 exons

Exon	Start	End
ENSE00001592763	163053925	163054161
ENSE00001599652	163046584	163046683
ENSE00001775040	163051260	163052032
ENSE00004235226	163042974	163043169

Expression profiles

Bgee: expression breadth broad, 52 present calls, max score 89.97.

Top tissues by expression

165 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	89.97	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.92	gold quality
left testis	UBERON:0004533	81.43	gold quality
right testis	UBERON:0004534	79.90	gold quality
testis	UBERON:0000473	78.72	gold quality
buccal mucosa cell	CL:0002336	75.74	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.67	gold quality
sural nerve	UBERON:0015488	62.01	silver quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	60.40	gold quality
islet of Langerhans	UBERON:0000006	60.10	gold quality
monocyte	CL:0000576	59.16	gold quality
parotid gland	UBERON:0001831	55.54	gold quality
upper lobe of lung	UBERON:0008948	55.21	silver quality
lower lobe of lung	UBERON:0008949	54.91	silver quality
gastrocnemius	UBERON:0001388	53.77	gold quality
saliva-secreting gland	UBERON:0001044	51.09	gold quality
calcaneal tendon	UBERON:0003701	50.70	silver quality
left ovary	UBERON:0002119	47.70	gold quality
biceps brachii	UBERON:0001507	47.34	gold quality
tibial nerve	UBERON:0001323	46.55	gold quality
adult organism	UBERON:0007023	46.51	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	45.96	silver quality
body of pancreas	UBERON:0001150	45.90	silver quality
anatomical system	UBERON:0000467	45.80	gold quality
heart left ventricle	UBERON:0002084	45.72	gold quality
material anatomical entity	UBERON:0000465	45.49	gold quality
skeletal muscle tissue	UBERON:0001134	45.48	gold quality
skin of hip	UBERON:0001554	45.46	silver quality
multicellular organism	UBERON:0000468	45.38	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.