PAN3-AS1

Summary

PAN3-AS1 (PAN3 antisense RNA 1, HGNC:39932) is a long non-coding RNA gene on chromosome 13q12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39932
Approved symbol	PAN3-AS1
Name	PAN3 antisense RNA 1
Location	13q12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261485
Ensembl biotype	lncRNA
Entrez	100288730
RNAcentral	URS000075C6DE — lncRNA, 2211 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000563843

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563843 — 1 exons

Exon	Start	End
ENSE00004208522	28136561	28138497

Expression profiles

Bgee: expression breadth ubiquitous, 178 present calls, max score 78.87.

FANTOM5 (CAGE): breadth broad, TPM avg 1.6889 / max 75.1101, expressed in 771 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
136528	0.6310	343
136531	0.3876	173
136530	0.3574	151
136529	0.3130	126

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.87	gold quality
oviduct epithelium	UBERON:0004804	76.31	gold quality
right uterine tube	UBERON:0001302	73.83	gold quality
right testis	UBERON:0004534	72.79	gold quality
right hemisphere of cerebellum	UBERON:0014890	72.78	gold quality
left testis	UBERON:0004533	72.49	gold quality
monocyte	CL:0000576	72.42	gold quality
cerebellar hemisphere	UBERON:0002245	72.30	gold quality
body of uterus	UBERON:0009853	72.30	gold quality
cerebellar cortex	UBERON:0002129	72.13	gold quality
leukocyte	CL:0000738	71.84	gold quality
stromal cell of endometrium	CL:0002255	71.81	gold quality
left ovary	UBERON:0002119	71.58	gold quality
testis	UBERON:0000473	71.51	gold quality
pancreatic ductal cell	CL:0002079	71.21	silver quality
spleen	UBERON:0002106	71.11	gold quality
right ovary	UBERON:0002118	71.09	gold quality
calcaneal tendon	UBERON:0003701	71.06	gold quality
cerebellum	UBERON:0002037	70.98	gold quality
adenohypophysis	UBERON:0002196	70.94	gold quality
tibial nerve	UBERON:0001323	70.58	gold quality
cortical plate	UBERON:0005343	70.42	gold quality
right coronary artery	UBERON:0001625	70.16	gold quality
lower esophagus muscularis layer	UBERON:0035833	70.11	gold quality
right lobe of thyroid gland	UBERON:0001119	70.10	gold quality
lower esophagus	UBERON:0013473	70.07	gold quality
pituitary gland	UBERON:0000007	70.04	gold quality
ovary	UBERON:0000992	70.03	gold quality
popliteal artery	UBERON:0002250	69.95	gold quality
tibial artery	UBERON:0007610	69.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.