PANK2-AS1

Summary

PANK2-AS1 (PANK2 antisense RNA 1, HGNC:40732) is a long non-coding RNA gene on chromosome 20p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40732
Approved symbol	PANK2-AS1
Name	PANK2 antisense RNA 1
Location	20p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229539
Ensembl biotype	lncRNA
Entrez	107985395
RNAcentral	URS0002A26F26 — lncRNA, 1935 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000451507, ENST00000702266, ENST00000725518, ENST00000725519

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000451507 — 2 exons

Exon	Start	End
ENSE00004049135	3888739	3889202
ENSE00004049141	3888221	3888549

Expression profiles

Bgee: expression breadth ubiquitous, 173 present calls, max score 89.72.

Top tissues by expression

234 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	89.72	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.81	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.04	gold quality
sural nerve	UBERON:0015488	76.52	gold quality
right testis	UBERON:0004534	73.45	gold quality
left testis	UBERON:0004533	73.00	gold quality
islet of Langerhans	UBERON:0000006	71.61	gold quality
gall bladder	UBERON:0002110	71.47	gold quality
testis	UBERON:0000473	70.98	gold quality
monocyte	CL:0000576	70.51	gold quality
leukocyte	CL:0000738	70.39	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	70.27	gold quality
cerebellar hemisphere	UBERON:0002245	69.36	gold quality
cerebellar cortex	UBERON:0002129	69.23	gold quality
colonic epithelium	UBERON:0000397	69.13	silver quality
right hemisphere of cerebellum	UBERON:0014890	68.94	gold quality
pituitary gland	UBERON:0000007	68.90	gold quality
right lobe of thyroid gland	UBERON:0001119	68.84	gold quality
cerebellum	UBERON:0002037	68.45	gold quality
smooth muscle tissue	UBERON:0001135	68.40	gold quality
adenohypophysis	UBERON:0002196	68.30	gold quality
ganglionic eminence	UBERON:0004023	68.26	gold quality
rectum	UBERON:0001052	68.23	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.91	gold quality
bone marrow cell	CL:0002092	67.82	silver quality
ventricular zone	UBERON:0003053	67.72	gold quality
metanephros cortex	UBERON:0010533	67.62	gold quality
left lobe of thyroid gland	UBERON:0001120	66.73	gold quality
endocervix	UBERON:0000458	66.67	gold quality
left ovary	UBERON:0002119	66.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.