PARP10

gene
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Also known as FLJ14464ARTD10

Summary

PARP10 (poly(ADP-ribose) polymerase family member 10, HGNC:25895) is a protein-coding gene on chromosome 8q24.3, encoding Protein mono-ADP-ribosyltransferase PARP10 (Q53GL7). ADP-ribosyltransferase that mediates mono-ADP-ribosylation of glutamate and aspartate residues on target proteins.

Poly(ADP-ribose) polymerases (PARPs), such as PARP10, regulate gene transcription by altering chromatin organization by adding ADP-ribose to histones. PARPs can also function as transcriptional cofactors (Yu et al., 2005 [PubMed 15674325]).

Source: NCBI Gene 84875 — RefSeq curated summary.

At a glance

  • GWAS associations: 8
  • Clinical variants (ClinVar): 219 total — 1 likely-pathogenic
  • Druggable target: yes — 6 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_032789

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:25895
Approved symbolPARP10
Namepoly(ADP-ribose) polymerase family member 10
Location8q24.3
Locus typegene with protein product
StatusApproved
AliasesFLJ14464, ARTD10
Ensembl geneENSG00000178685
Ensembl biotypeprotein_coding
OMIM609564
Entrez84875

Gene structure

Transcript identifiers

Ensembl transcripts: 34 — 26 protein_coding, 4 retained_intron, 3 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay

ENST00000313028, ENST00000313059, ENST00000524918, ENST00000525486, ENST00000525773, ENST00000525879, ENST00000526007, ENST00000526985, ENST00000527262, ENST00000528136, ENST00000528580, ENST00000528625, ENST00000528914, ENST00000528963, ENST00000529311, ENST00000529842, ENST00000530478, ENST00000531537, ENST00000531707, ENST00000532311, ENST00000532660, ENST00000533665, ENST00000534737, ENST00000857398, ENST00000857399, ENST00000857400, ENST00000857401, ENST00000914214, ENST00000966741, ENST00000966742, ENST00000966743, ENST00000966744, ENST00000966745, ENST00000966746

RefSeq mRNA: 2 — MANE Select: NM_032789 NM_001317895, NM_032789

CCDS: CCDS34960, CCDS83331

Canonical transcript exons

ENST00000313028 — 11 exons

ExonStartEnd
ENSE00001250817143983167143983811
ENSE00001250825143984008143984104
ENSE00001306487143986055143986233
ENSE00001309960143984544143985328
ENSE00002140641143977158143977830
ENSE00003460094143986358143986460
ENSE00003467358143984210143984431
ENSE00003526489143982932143983065
ENSE00003528592143985412143985648
ENSE00003529204143977907143978081
ENSE00003565027143985721143985975

Expression profiles

Bgee: expression breadth ubiquitous, 243 present calls, max score 97.53.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 15.3317 / max 229.1574, expressed in 1630 samples.

FANTOM5 promoters (7 alternative TSS)

Promoter IDTPM avgSamples expressed
955969.80341492
955954.56951310
955980.4404225
956000.2472147
955970.151052
956010.078940
955990.041215

Top tissues by expression

252 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
granulocyteCL:000009497.53gold quality
pancreatic ductal cellCL:000207997.46gold quality
right uterine tubeUBERON:000130297.18gold quality
spleenUBERON:000210695.61gold quality
vermiform appendixUBERON:000115495.45gold quality
lymph nodeUBERON:000002995.22gold quality
right testisUBERON:000453495.01gold quality
tendon of biceps brachiiUBERON:000818894.75gold quality
left testisUBERON:000453394.73gold quality
right lobe of liverUBERON:000111494.53gold quality
right adrenal glandUBERON:000123394.32gold quality
metanephros cortexUBERON:001053394.31gold quality
right adrenal gland cortexUBERON:003582794.24gold quality
monocyteCL:000057693.79gold quality
leukocyteCL:000073893.58gold quality
left adrenal gland cortexUBERON:003582593.50gold quality
left adrenal glandUBERON:000123493.45gold quality
small intestine Peyer’s patchUBERON:000345493.16gold quality
bloodUBERON:000017893.14gold quality
adrenal cortexUBERON:000123593.13gold quality
right ovaryUBERON:000211892.83gold quality
mucosa of transverse colonUBERON:000499192.79gold quality
parotid glandUBERON:000183192.72gold quality
upper lobe of left lungUBERON:000895292.66gold quality
left ovaryUBERON:000211992.62gold quality
testisUBERON:000047392.57gold quality
bone marrow cellCL:000209292.19gold quality
right lobe of thyroid glandUBERON:000111992.13gold quality
cortex of kidneyUBERON:000122592.08gold quality
muscle layer of sigmoid colonUBERON:003580592.02gold quality

Single-cell (SCXA)

Detected in 3 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-MTAB-9067yes11.37
E-MTAB-9801yes6.00
E-ANND-3no3.36

Regulation

Is transcription factor: yes

Downstream targets (CollecTRI)

2 targets.

TargetRegulation
CXCL8Repression
NFKBIARepression

miRNA regulators (miRDB)

7 targeting PARP10, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-66199.0965.942062
HSA-MIR-6827-5P98.4664.881256
HSA-MIR-93-3P98.1566.651309
HSA-MIR-3192-5P96.9865.761926
HSA-MIR-4485-5P95.9159.69198
HSA-MIR-6846-3P94.8065.19389
HSA-MIR-609091.0162.65222

Literature-anchored findings (GeneRIF, showing 13)

  • novel PARP enzyme involved in the control of cell proliferation (PMID:15674325)
  • Overexpression of PARP10 results in loss of cell viability, although down-expression by short hairpin RNA leads to delayed G1 progression and concomitant cell death. (PMID:16455663)
  • alternative catalytic mechanism for PARP10 compared to PARP1 in which the acidic target residue of the substrate functionally substitutes for the catalytic glutamate by using substrate-assisted catalysis to transfer ADP-ribose (PMID:18851833)
  • study results show that the interaction between PARP10 and NS1 of H5N1 avian influenza virus can change cell cycle, and PARP10 can affect virus replication (PMID:22176891)
  • PARP10 binding to PCNA is required for translesion DNA synthesis. (PMID:24695737)
  • ARTD10 plays roles in immunity, metabolism ,apoptosis and DNA damage repair. [review] (PMID:24878761)
  • PARP10 expression decreased upon fasting, a condition that is characterized by increases in mitochondrial biogenesis. Finally, lower PARP10 expression is associated with increased fatty acid oxidation (PMID:29293500)
  • Study shows that PARP10 is downregulated in intrahepatic metastatic hepatocellular carcinoma. Further results provide evidence that deficiency of PARP10 markedly increased the migration and invasion of tumor cells through regulation of epithelial-mesenchymal transition, and that PARP10 expression inhibited tumor metastasis in vivo. (PMID:29515234)
  • PARP10 promotes cellular proliferation, and its overexpression alleviates cellular sensitivity to replication stress and fosters the restart of stalled replication forks. In mouse xenograft studies, PARP10 loss reduces the tumorigenesis activity of HeLa cells. Its overexpression results in tumor formation by non-transformed RPE-1 cells. PARP10 may promote cellular transformation by alleviating replication stress. (PMID:30032250)
  • PLK1/NF-kappaB feedforward circuit antagonizes the mono-ADP-ribosyltransferase activity of PARP10 and facilitates HCC progression. (PMID:32060423)
  • [PARP10 Influences the Proliferation of Colorectal Carcinoma Cells, a Preliminary Study]. (PMID:32392194)
  • The mono-ADP-ribosyltransferase ARTD10 regulates the voltage-gated K(+) channel Kv1.1 through protein kinase C delta. (PMID:33059680)
  • PARP10 is highly expressed and associated with inferior outcomes in acute myeloid leukemia. (PMID:37506247)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_rerioparp10ENSDARG00000087145
mus_musculusParp10ENSMUSG00000063268
rattus_norvegicusParp10ENSRNOG00000004361

Paralogs (8): PARP12 (ENSG00000059378), ZC3HAV1 (ENSG00000105939), PARP11 (ENSG00000111224), PARP9 (ENSG00000138496), ZC3HAV1L (ENSG00000146858), TIPARP (ENSG00000163659), PARP14 (ENSG00000173193), PARP15 (ENSG00000173200)

Protein

Protein identifiers

Protein mono-ADP-ribosyltransferase PARP10Q53GL7 (reviewed: Q53GL7)

Alternative names: ADP-ribosyltransferase diphtheria toxin-like 10, Poly [ADP-ribose] polymerase 10

All UniProt accessions (15): E9PIA6, E9PIK9, E9PJI2, Q53GL7, E9PK67, E9PLE8, E9PM86, E9PNI7, E9PPE7, E9PPU2, E9PPV8, E9PQQ6, E9PSE7, E9PSG8, F8W8G7

UniProt curated annotations — full annotation on UniProt →

Function. ADP-ribosyltransferase that mediates mono-ADP-ribosylation of glutamate and aspartate residues on target proteins. In contrast to PARP1 and PARP2, it is not able to mediate poly-ADP-ribosylation. Catalyzes mono-ADP-ribosylation of GSK3B, leading to negatively regulate GSK3B kinase activity. Involved in translesion DNA synthesis in response to DNA damage via its interaction with PCNA.

Subunit / interactions. Interacts with MYC. Interacts with PARP14. Interacts (via-PIP box and ubiquitin-interacting motifs) with PCNA.

Subcellular location. Nucleus. Nucleolus. Cytoplasm.

Tissue specificity. Highly expressed in spleen and thymus. Intermediate levels in liver, kidney, pancreas, prostate, testis, ovary, intestine, and leukocytes. Low expression in heart, brain, placenta, lung, skeletal muscle, and colon.

Post-translational modifications. Stimulated through its phosphorylation by CDK2. Acquires CDK-dependent phosphorylation through late-G1 to S phase, and from prometaphase to cytokinesis in the nucleolar organizing regions. Phosphorylation is suppressed in growth-arrested cells. Auto-mono-ADP-ribosylated on glutamate and lysine residues.

Domain organisation. The PIP-box mediates the interaction with PCNA.

Similarity. Belongs to the ARTD/PARP family.

RefSeq proteins (2): NP_001304824, NP_116178* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR012317Poly(ADP-ribose)pol_cat_domDomain
IPR012677Nucleotide-bd_a/b_plait_sfHomologous_superfamily
IPR034464PAR10_RRM1_2Domain
IPR052056Mono-ARTD/PARPFamily

Pfam: PF00644, PF23085

Enzyme classification (BRENDA):

  • EC 2.4.2.30 — NAD+ ADP-ribosyltransferase (BRENDA: 32 organisms, 193 substrates, 306 inhibitors, 42 Km, 24 kcat entries)

Substrate kinetics (BRENDA)

5 substrates with measured Km, best-characterized 5. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
NAD+0.002–0.25125
(ADP-D-RIBOSYL)N-ACTIN0.011–0.0377
(ADP-D-RIBOSYL)N-SOYBEAN-TRYPSIN-INHIBITOR0.03–0.4296
(ADP-D-RIBOSYL)N-RHOA PROTEIN0.0171
N6-ETHENO-NAD+0.02251

Catalyzed reactions (Rhea), 3 shown:

  • L-aspartyl-[protein] + NAD(+) = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide (RHEA:54424)
  • L-lysyl-[protein] + NAD(+) = N(6)-(ADP-D-ribosyl)-L-lysyl-[protein] + nicotinamide + H(+) (RHEA:58220)
  • L-glutamyl-[protein] + NAD(+) = 5-O-(ADP-D-ribosyl)-L-glutamyl-[protein] + nicotinamide (RHEA:58224)

UniProt features (70 total): strand 19, modified residue 11, helix 9, mutagenesis site 8, region of interest 5, sequence conflict 5, sequence variant 3, turn 3, short sequence motif 3, compositionally biased region 2, chain 1, domain 1

Structure

Experimental structures (PDB)

7 structures.

PDBMethodResolution (Å)
5LX6X-RAY DIFFRACTION1.25
9FRPX-RAY DIFFRACTION1.4
9FRSX-RAY DIFFRACTION2.02
3HKVX-RAY DIFFRACTION2.1
6FXIX-RAY DIFFRACTION2.6
9RLSX-RAY DIFFRACTION2.75
2DHXSOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q53GL7-F168.850.22

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (11): 101, 106, 140, 378, 423, 431, 663, 882, 916, 916, 1011

Mutagenesis-validated functional residues (8):

PositionPhenotype
650–690decreased interaction with pcna.
831–838abolishes interaction with pcna.
882decreased auto-mono-adp-ribosylation.
888abolishes catalytic activity; abolishes interaction with parp14.
980–982strongly decreased catalytic activity.
985strongly decreased catalytic activity.
987decreased catalytic activity.
999does not affect catalytic activity.

Function

Pathways and Gene Ontology

Reactome pathways

3 pathways

IDPathway
R-HSA-196807Nicotinate metabolism
R-HSA-9683610Maturation of nucleoprotein
R-HSA-9694631Maturation of nucleoprotein

MSigDB gene sets: 144 (showing top): GOZGIT_ESR1_TARGETS_DN, GOBP_DNA_DAMAGE_TOLERANCE, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_FIBROBLAST_PROLIFERATION, GOBP_NEGATIVE_REGULATION_OF_NF_KAPPAB_TRANSCRIPTION_FACTOR_ACTIVITY, GOBP_NEGATIVE_REGULATION_OF_MOLECULAR_FUNCTION, GOBP_DNA_DAMAGE_RESPONSE, GOBP_POST_TRANSLATIONAL_PROTEIN_MODIFICATION, GOBP_PROTEIN_POLYUBIQUITINATION, GOBP_DNA_BIOSYNTHETIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_PROTEIN_METABOLIC_PROCESS, GOBP_ORGANIC_ACID_METABOLIC_PROCESS, GOBP_PROTEIN_K63_LINKED_UBIQUITINATION, CCAGGGG_MIR331, GOBP_REGULATION_OF_PROTEIN_POLYUBIQUITINATION

GO Biological Process (14): DNA repair (GO:0006281), chromatin organization (GO:0006325), negative regulation of gene expression (GO:0010629), viral protein processing (GO:0019082), translesion synthesis (GO:0019985), obsolete negative regulation of NF-kappaB transcription factor activity (GO:0032088), negative regulation of fibroblast proliferation (GO:0048147), protein poly-ADP-ribosylation (GO:0070212), protein auto-ADP-ribosylation (GO:0070213), negative regulation of protein K63-linked ubiquitination (GO:1900045), nicotinate metabolic process (GO:1901847), DNA damage response (GO:0006974), NAD+ biosynthetic process via the salvage pathway (GO:0034355), negative regulation of DNA-templated transcription (GO:0045892)

GO Molecular Function (13): transcription corepressor activity (GO:0003714), NAD+ poly-ADP-ribosyltransferase activity (GO:0003950), nucleotidyltransferase activity (GO:0016779), K63-linked polyubiquitin modification-dependent protein binding (GO:0070530), DNA-binding transcription factor binding (GO:0140297), NAD+-protein-lysine ADP-ribosyltransferase activity (GO:0140804), NAD+-protein-aspartate ADP-ribosyltransferase activity (GO:0140806), NAD+-protein-glutamate ADP-ribosyltransferase activity (GO:0140807), NAD+-protein mono-ADP-ribosyltransferase activity (GO:1990404), nucleic acid binding (GO:0003676), protein binding (GO:0005515), transferase activity (GO:0016740), glycosyltransferase activity (GO:0016757)

GO Cellular Component (5): nucleus (GO:0005634), nucleolus (GO:0005730), cytoplasm (GO:0005737), Golgi apparatus (GO:0005794), cytosol (GO:0005829)

Reactome top-level categories

Rollup of top-3 pathways:

CategoryPathways
Metabolism of water-soluble vitamins and cofactors1
Translation of Structural Proteins1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
NAD+-protein mono-ADP-ribosyltransferase activity3
post-translational protein modification2
pentosyltransferase activity2
binding2
intracellular membrane-bounded organelle2
cellular anatomical structure2
cytoplasm2
DNA metabolic process1
DNA damage response1
cellular component organization1
gene expression1
regulation of gene expression1
negative regulation of macromolecule biosynthetic process1
viral process1
viral gene expression1
DNA damage tolerance1
DNA synthesis involved in DNA replication1
negative regulation of cell population proliferation1
fibroblast proliferation1
regulation of fibroblast proliferation1
protein K63-linked ubiquitination1
regulation of protein K63-linked ubiquitination1
negative regulation of protein polyubiquitination1
alkaloid metabolic process1
monocarboxylic acid metabolic process1
pyridine-containing compound metabolic process1
cellular response to stress1
NAD+ biosynthetic process1
pyridine nucleotide salvage1
purine nucleotide salvage1
DNA-templated transcription1
regulation of DNA-templated transcription1
negative regulation of RNA biosynthetic process1
transcription coregulator activity1
negative regulation of DNA-templated transcription1
transferase activity, transferring phosphorus-containing groups1
polyubiquitin modification-dependent protein binding1
transcription factor binding1
catalytic activity, acting on a protein1
catalytic activity1

Protein interactions and networks

STRING

1008 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
PARP10MYCP01106874
PARP10PLECQ15149801
PARP10PARP16Q8N5Y8776
PARP10PARP2Q9UGN5766
PARP10PARP1P09874764
PARP10PARP3Q9Y6F1753
PARP10TRPT1Q86TN4732
PARP10PARP6Q2NL67716
PARP10PARP4Q9UKK3711
PARP10PARP8Q8N3A8699
PARP10SNTB2Q13425684
PARP10MACROD2A1Z1Q3662
PARP10MACROD1Q9BQ69661
PARP10ADPRSQ9NX46656
PARP10TNKSO95271625

IntAct

17 interactions, top by confidence:

ABTypeScore
MACROD2PARP10psi-mi:“MI:1310”(de-ADP-ribosylation reaction)0.440
PARP10psi-mi:“MI:1310”(de-ADP-ribosylation reaction)0.440
repPARP10psi-mi:“MI:1310”(de-ADP-ribosylation reaction)0.440
POA1PARP10psi-mi:“MI:1310”(de-ADP-ribosylation reaction)0.440
PARP10psi-mi:“MI:0557”(adp ribosylation reaction)0.440
CASP6PARP10psi-mi:“MI:0194”(cleavage reaction)0.440
CASP8PARP10psi-mi:“MI:0194”(cleavage reaction)0.440
OARD1PARP10psi-mi:“MI:0414”(enzymatic reaction)0.440
PARP10OARD1psi-mi:“MI:0414”(enzymatic reaction)0.440
CA10ENTPD5psi-mi:“MI:0914”(association)0.350
RNF114DSTpsi-mi:“MI:0914”(association)0.350
RNF166WASLpsi-mi:“MI:0914”(association)0.350
PARP10psi-mi:“MI:0915”(physical association)0.000

BioGRID (65): UBC (Reconstituted Complex), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), PARP10 (Affinity Capture-MS), Parp14 (Co-localization), PARP10 (Reconstituted Complex), PARP10 (Reconstituted Complex), PARP10 (Affinity Capture-Western), RAN (Biochemical Activity), PARP10 (Affinity Capture-RNA)

ESM2 similar proteins: A1L3T7, A2A3L6, A4IFI1, A7E3N7, A8MYJ7, A8VU90, O94761, O94812, O95153, O95382, P97680, Q0P5G1, Q13671, Q14154, Q3UYR4, Q4V896, Q53GL7, Q569K6, Q58CQ5, Q58EX7, Q66H85, Q6DT37, Q6F5E8, Q6ZVH7, Q76MJ5, Q7TNF8, Q7Z3H0, Q80UU1, Q80UW5, Q8BWA8, Q8BXP5, Q8BYG0, Q8CIE4, Q8CJ00, Q8IYJ3, Q8NAG6, Q8TE82, Q91WA6, Q91WE1, Q921Q7

Diamond homologs: A1Z1Q3, A4W960, A7MG20, A8AI35, B4T2X8, B5F961, B5RBF3, B5XXK9, B7LT90, C9Y0V8, D2TT52, D3RKJ0, D5CE05, E1PL40, E1SDF1, O28751, O59182, O75367, O93327, P0A8D6, P0A8D7, P0A8D8, P0C6F6, P0C6T4, P0C6T6, P0C6T8, P0C6T9, P0C6U0, P0C6U1, P0C6U7, P0C6W3, P0C6W5, P0C6W7, P0C6W8, P0C6W9, P0C6X0, P0C6X6, P67341, P67342, P9WK28

SIGNOR signaling

3 interactions.

AEffectBMechanism
PARP10“up-regulates activity”G3BP1“post translational modification”
PLK1“up-regulates activity”PARP10phosphorylation
CyclinE/CDK2“up-regulates activity”PARP10phosphorylation

Disease & clinical

Clinical variants and AI predictions

ClinVar

219 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic1
Uncertain significance165
Likely benign24
Benign1

Top pathogenic / likely-pathogenic (1)

Variant IDHGVSClassification
804412NM_032789.5(PARP10):c.647_648del (p.Thr216fs)Likely pathogenic

SpliceAI

2915 predictions. Top by Δscore:

VariantEffectΔscore
8:143977826:CGTGG:Cacceptor_gain1.0000
8:143977831:C:CCacceptor_gain1.0000
8:143977901:CCTCA:Cdonor_loss1.0000
8:143977902:CTCAC:Cdonor_loss1.0000
8:143977903:TCAC:Tdonor_loss1.0000
8:143977904:CAC:Cdonor_loss1.0000
8:143977905:A:ACdonor_gain1.0000
8:143977905:ACCG:Adonor_loss1.0000
8:143977906:C:CCdonor_gain1.0000
8:143978077:TCCAC:Tacceptor_gain1.0000
8:143978078:CCAC:Cacceptor_gain1.0000
8:143978078:CCACC:Cacceptor_gain1.0000
8:143978079:CAC:Cacceptor_gain1.0000
8:143978079:CACC:Cacceptor_gain1.0000
8:143978080:AC:Aacceptor_gain1.0000
8:143978080:ACC:Aacceptor_loss1.0000
8:143978081:CC:Cacceptor_gain1.0000
8:143978082:C:CAacceptor_loss1.0000
8:143978082:C:CCacceptor_gain1.0000
8:143978083:T:Gacceptor_loss1.0000
8:143982927:CTCA:Cdonor_loss1.0000
8:143982929:CA:Cdonor_loss1.0000
8:143982930:A:ACdonor_gain1.0000
8:143982930:ACACG:Adonor_loss1.0000
8:143982931:C:CCdonor_gain1.0000
8:143982931:CA:Cdonor_gain1.0000
8:143983063:CCA:Cacceptor_gain1.0000
8:143983064:CA:Cacceptor_gain1.0000
8:143983064:CAC:Cacceptor_gain1.0000
8:143983066:C:CCacceptor_gain1.0000

AlphaMissense

6503 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
8:143977589:G:CF991L0.997
8:143977589:G:TF991L0.997
8:143977591:A:GF991L0.997
8:143977932:G:CF902L0.997
8:143977932:G:TF902L0.997
8:143977933:A:GF902S0.997
8:143977934:A:GF902L0.997
8:143977731:A:GF944S0.995
8:143977802:G:CF920L0.995
8:143977802:G:TF920L0.995
8:143977803:A:GF920S0.995
8:143977804:A:GF920L0.995
8:143977598:G:CF988L0.994
8:143977598:G:TF988L0.994
8:143977600:A:GF988L0.994
8:143977982:A:CY886D0.994
8:143977631:G:CS977R0.993
8:143977631:G:TS977R0.993
8:143977633:T:GS977R0.993
8:143977730:G:CF944L0.993
8:143977730:G:TF944L0.993
8:143977732:A:GF944L0.993
8:143977557:A:TI1002N0.992
8:143977560:A:GL1001P0.992
8:143977584:T:AD993V0.992
8:143977590:A:GF991S0.992
8:143977596:A:TV989D0.992
8:143977739:C:AK941N0.992
8:143977739:C:GK941N0.992
8:143977557:A:GI1002T0.991

dbSNP variants (sampled 300 via entrez): RS1000129401 (8:144001650 G>A), RS1000247414 (8:144001509 C>A), RS1000410038 (8:144008243 G>C), RS1000602570 (8:143990929 A>G), RS1000670787 (8:143995847 G>A), RS1000881324 (8:143979100 A>G), RS1000954880 (8:143984394 T>C), RS1000974009 (8:143978829 A>C,G), RS1001264450 (8:143993141 G>A,T), RS1001610286 (8:143986771 C>G,T), RS1001763387 (8:143987022 T>G), RS1001796389 (8:144003389 A>G), RS1001911072 (8:144003018 C>A), RS1002023312 (8:144009384 G>C,T), RS1002271584 (8:143992192 A>C)

Disease associations

OMIM: gene MIM:609564 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

8 associations (top):

StudyTraitp-value
GCST002541_68Menarche (age at onset)1.000000e-08
GCST008103_86Bipolar disorder1.000000e-06
GCST008115_8Bipolar I disorder2.000000e-08
GCST010703_132Brain morphology (MOSTest)3.000000e-08
GCST90002390_617Mean corpuscular hemoglobin4.000000e-13
GCST90002392_525Mean corpuscular volume2.000000e-15
GCST90002404_105Red cell distribution width1.000000e-22
GCST90020026_753Hip index3.000000e-09

EFO canonical traits (6, from GWAS)

EFO IDTrait name
EFO:0004703age at menarche
EFO:0009963bipolar I disorder
EFO:0004346neuroimaging measurement
EFO:0004527mean corpuscular hemoglobin
EFO:0009188Red cell distribution width
EFO:0008039BMI-adjusted hip circumference

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2429708 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

6 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 39,549 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1094636NIRAPARIB46,433
CHEMBL1173055RUCAPARIB47,009
CHEMBL3137320TALAZOPARIB45,534
CHEMBL521686OLAPARIB413,038
CHEMBL4112930PAMIPARIB32,114
CHEMBL506871VELIPARIB35,421

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — Mono-ADP-ribosylating PARPs

Most potent curated ligand interactions (3 total), top 3:

LigandActionAffinityParameter
compound 8a [PMID: 35500474]Inhibition6.85pIC50
compound 32 [PMID: 30006177]Inhibition6.64pIC50
OUL35Inhibition6.48pIC50

ChEMBL bioactivities

286 potent at pChembl≥5 of 331 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
8.11IC507.8nMCHEMBL5404785
8.11IC507.762nMCHEMBL5404785
7.97IC5010.8nMCHEMBL5402698
7.60IC5025nMCHEMBL5431108
7.60IC5025.12nMCHEMBL5431108
6.93IC50117.5nMCHEMBL5404785
6.92IC50120nMCHEMBL5404785
6.89IC50130nMCHEMBL5192839
6.87IC50134.9nMCHEMBL5181947
6.87IC50134.9nMCHEMBL5192839
6.85IC50140nMCHEMBL5181947
6.85IC50140nMCHEMBL5176874
6.82IC50150nMCHEMBL5200358
6.82IC50151.4nMCHEMBL5200358
6.81IC50154.9nMCHEMBL5187187
6.81IC50156nMCHEMBL5207717
6.80IC50160nMCHEMBL5187187
6.80IC50160nMCHEMBL5200521
6.80IC50158.5nMCHEMBL5200521
6.75IC50180nMCHEMBL4287262
6.75IC50180nMCHEMBL5431108
6.73IC50186.2nMCHEMBL4287262
6.73IC50186.2nMCHEMBL5431108
6.65IC50223.9nMCHEMBL6170252
6.64IC50230nMCHEMBL4208737
6.63IC50234.4nMCHEMBL4208737
6.61IC50245.5nMCHEMBL4128574
6.60IC50250nMCHEMBL4128574
6.54IC50290nMCHEMBL5186967
6.54IC50288.4nMCHEMBL5186967
6.51IC50310nMCHEMBL5181107
6.51IC50309nMCHEMBL5181107
6.50IC50320nMCHEMBL5421878
6.50IC50316.2nMCHEMBL5421878
6.49IC50325nMCHEMBL5395820
6.48IC50329nMCHEMBL1438938
6.48IC50330nMCHEMBL1438938
6.46IC50350nMOLAPARIB
6.42IC50382nMOLAPARIB
6.42IC50377nMCHEMBL5571636
6.41IC50390nMCHEMBL4125748
6.41IC50387.3nMCHEMBL4125748
6.40IC50398.1nMCHEMBL4129789
6.40IC50400nMCHEMBL4129789
6.34IC50460nMCHEMBL4130035
6.34IC50460nMCHEMBL4127497
6.34IC50457.1nMCHEMBL4127497
6.33IC50467.7nMCHEMBL4129923
6.33IC50467.7nMCHEMBL4130035
6.33IC50470nMCHEMBL4129923

PubChem BioAssay actives

287 with measured affinity, of 484 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
5,8-dimethoxy-[1,2,4]triazolo[3,4-b][1,3]benzothiazol-1-amine1965928: Inhibition of N-terminal MBP tagged/C-terminal PARP10 (unknown origin) expressed in Escherichia coli in presence of NAD+ by proximity enhanced assayic500.0078uM
4-[[3-[3-(5-bromofuran-2-yl)-6,8-dihydro-5H-[1,2,4]triazolo[4,3-a]pyrazine-7-carbonyl]-4-fluorophenyl]methyl]-2H-phthalazin-1-one2012702: Inhibition of PARP10 (unknown origin) using biotinylated NAD+ as substrate by luminescence assayic500.0108uM
6-methyl-[1,2,4]triazolo[3,4-b][1,3]benzothiazol-1-amine1965928: Inhibition of N-terminal MBP tagged/C-terminal PARP10 (unknown origin) expressed in Escherichia coli in presence of NAD+ by proximity enhanced assayic500.0250uM
6-(cyclopentylmethoxy)-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.1300uM
6-(cyclohexylmethoxy)-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.1349uM
4-[2-fluoro-5-[(4-oxo-3H-phthalazin-1-yl)methyl]benzoyl]-N-[4-[(4-methoxyphenyl)carbamoyl]phenyl]piperazine-1-carboxamide1868363: Inhibition of PARP-10 (unknown origin)ic500.1400uM
6-[(2-fluorophenyl)methoxy]-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.1500uM
6-(cyclobutylmethoxy)-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.1549uM
4-[(8-methyl-4-oxo-7-prop-1-ynyl-3H-quinazolin-2-yl)methylsulfanyl]benzoic acid1869173: Inhibition of PARP10 (unknown origin)ic500.1560uM
6-(thiophen-3-ylmethoxy)-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.1585uM
4-(4-carbamoylphenoxy)benzoic acid1405638: Inhibition of C-terminal His-tagged human ARTD10 (809 to 1017 residues) expressed in Escherichia coli Rosetta2 (DE3) using SRPK2 as substrate after 13 hrs in presence of NAD+ic500.1800uM
4-[(2-fluorophenyl)methoxy]benzamide1405638: Inhibition of C-terminal His-tagged human ARTD10 (809 to 1017 residues) expressed in Escherichia coli Rosetta2 (DE3) using SRPK2 as substrate after 13 hrs in presence of NAD+ic500.2300uM
4-[3-[4-(3-fluorophenyl)piperidine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.2455uM
4-(cyclobutylmethoxy)benzamide1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.2884uM
6-(cyclopropylmethoxy)-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.3090uM
[1,2,4]triazolo[3,4-b][1,3]benzothiazole-5,8-diol1965915: Inhibition of N-terminal MBP tagged/C-terminal PARP10 (unknown origin) expressed in Escherichia coli in presence of NAD+ic500.3162uM
5-(trifluoromethyl)-4-[[(2S)-1-[3-[4-[5-(trifluoromethyl)pyrimidin-2-yl]piperazine-1-carbonyl]azetidin-1-yl]propan-2-yl]amino]-1H-pyridazin-6-one1965304: Inhibition of human recombinant N-terminal FLAG-tagged / C-terminal Strep-tagged PARP10 (805 to 1025 end residues) expressed in baculovirus infected Sf9 cells expression system incubated for 1 hr by ELISA assayic500.3250uM
4-(4-carbamoylphenoxy)benzamide1496070: Inhibition of full length recombinant His6-tagged PARP10 catalytic domain (unknown origin) expressed in Escherichia coli BL21(DE3) by fluorescence based assayic500.3290uM
Olaparib2019996: Inhibition of human N-terminal FLAG-tagged/C-terminal Strep-tagged recombinant PARP10 (805 to 1025 residues) expressed in Sf9 cellsic500.3500uM
2-[(2S)-1-oxo-1-[4-[5-(trifluoromethyl)pyrimidin-2-yl]piperazin-1-yl]propan-2-yl]indazole-7-carboxamide2096830: Inhibition of PARP10 (unknown origin) measured after 1 hr incubation by microplate reader assayic500.3770uM
4-[3-[4-(4-fluorophenyl)-4-hydroxypiperidine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.3873uM
4-[3-[4-(4-fluorophenyl)piperidine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.3981uM
4-[3-[4-(2-fluorophenyl)piperazine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.4571uM
4-[3-[4-(3-fluorophenyl)piperazine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.4600uM
4-[3-[4-(2-fluorophenyl)piperidine-1-carbonyl]phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.4677uM
3-(4-carbamoylphenoxy)benzamide1869165: Inhibition of C-terminal his-tagged human PARP10 expressed in Escherichia coli Rosette2 (DE3)ic500.4800uM
5,8-dimethoxy-[1,2,4]triazolo[3,4-b][1,3]benzothiazole1965915: Inhibition of N-terminal MBP tagged/C-terminal PARP10 (unknown origin) expressed in Escherichia coli in presence of NAD+ic500.4898uM
Rucaparib1428394: Inhibition of full length recombinant human His6-tagged PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.5623uM
4-[3-(4-phenylpiperidine-1-carbonyl)phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.5754uM
4-(cyclopentylmethoxy)benzamide1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.5888uM
4-[3-(3-phenylpiperidine-1-carbonyl)phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.6000uM
4-(cyclopropylmethoxy)benzamide1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.6000uM
4-(cyclobutylmethoxy)-2-fluorobenzamide1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.6166uM
4-(4-formylphenoxy)benzamide1405638: Inhibition of C-terminal His-tagged human ARTD10 (809 to 1017 residues) expressed in Escherichia coli Rosetta2 (DE3) using SRPK2 as substrate after 13 hrs in presence of NAD+ic500.6166uM
5-methyl-6-(1H-pyrrolo[2,3-b]pyridin-5-yl)-3,4-dihydro-2H-isoquinolin-1-one1515545: Inhibition of human PARP10 catalytic domain assessed as reduction in MARylation of His6-tagged SRPK2 substrate after 60 mins in presence of NAD+ by chemifluorescence assayic500.7079uM
4-cyclobutyloxybenzamide1405638: Inhibition of C-terminal His-tagged human ARTD10 (809 to 1017 residues) expressed in Escherichia coli Rosetta2 (DE3) using SRPK2 as substrate after 13 hrs in presence of NAD+ic500.7200uM
methyl (Z)-4-(3-carbamoylanilino)-4-oxobut-2-enoate1202205: Inhibition of hexahistidine-tagged full length human recombinant ARTD10 expressed in Escherichia coli BL21(DE3) assessed as Inhibition of ADP-ribosyltransferase activity incubated for 15 mins using biotin-NAD+ by chemiluminescence detection based assayic500.7586uM
4-[3-(3-phenylpyrrolidine-1-carbonyl)phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic500.7762uM
8-methoxy-4H-thieno[2,3-c]isoquinolin-5-one1833808: Inhibition of PARP10 (809 to 1017 residues) (unknown origin) expressed in Escherichia coli using NAD+ as substrate incubated for 13 hrs by fluorescence based assayic500.7800uM
8-ethoxy-4H-thieno[2,3-c]isoquinolin-5-one1833808: Inhibition of PARP10 (809 to 1017 residues) (unknown origin) expressed in Escherichia coli using NAD+ as substrate incubated for 13 hrs by fluorescence based assayic500.9200uM
4-(cyclohexylmethoxy)-2-fluorobenzamide1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic500.9550uM
ethyl 1-[3-(4-carbamoylphenoxy)benzoyl]piperidine-4-carboxylate1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic501.0600uM
4-[3-(4-phenylpiperazine-1-carbonyl)phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic501.0715uM
6-(1H-indol-5-yl)-5-methyl-3,4-dihydro-2H-isoquinolin-1-one1515545: Inhibition of human PARP10 catalytic domain assessed as reduction in MARylation of His6-tagged SRPK2 substrate after 60 mins in presence of NAD+ by chemifluorescence assayic501.0965uM
4-[3-(2-phenylpiperidine-1-carbonyl)phenoxy]benzamide1496062: Inhibition of full length recombinant His6-tagged human PARP10 expressed in Escherichia coli BL21(DE3) preincubated for 15 mins followed by biotinylated NAD+ addition by chemiluminescence assayic501.0965uM
5,7-dimethoxy-[1,2,4]triazolo[3,4-b][1,3]benzothiazole1965915: Inhibition of N-terminal MBP tagged/C-terminal PARP10 (unknown origin) expressed in Escherichia coli in presence of NAD+ic501.1000uM
4-phenoxybenzamide1405638: Inhibition of C-terminal His-tagged human ARTD10 (809 to 1017 residues) expressed in Escherichia coli Rosetta2 (DE3) using SRPK2 as substrate after 13 hrs in presence of NAD+ic501.1000uM
6-(3-chlorophenyl)-3,4-dihydro-2H-isoquinolin-1-one1515545: Inhibition of human PARP10 catalytic domain assessed as reduction in MARylation of His6-tagged SRPK2 substrate after 60 mins in presence of NAD+ by chemifluorescence assayic501.1000uM
4-(5-chloro-2-methoxyphenyl)-N-[5-[[1-[2-fluoro-5-[(4-oxo-3H-phthalazin-1-yl)methyl]benzoyl]piperidin-4-yl]methoxy]-1,3,4-thiadiazol-2-yl]-6-methylpyridine-3-carboxamide2080542: Inhibition of PARP10 (unknown origin)ic501.1030uM
6-[(3-bromophenyl)methoxy]-2,3-dihydrophthalazine-1,4-dione1868249: Inhibition of human PARP-10 using NAD+ as substrate incubated for 10 mins by fluorescence based analysisic501.1482uM

CTD chemical–gene interactions

39 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Air Pollutantsaffects expression, increases abundance, decreases expression2
Nickelincreases expression2
Tobacco Smoke Pollutiondecreases expression2
Valproic Acidincreases methylation, decreases expression2
Particulate Matterdecreases expression, increases abundance2
aristolochic acid Iincreases expression1
FR900359increases phosphorylation1
SBI-797812increases activity1
bisphenol Adecreases methylation1
diisononyl phthalateincreases methylation1
beta-lapachoneincreases expression, decreases expression1
sodium arseniteincreases expression1
pentanalincreases expression1
di-n-butylphosphoric acidaffects expression1
veliparibaffects binding1
jinfukangincreases expression, affects cotreatment1
(+)-JQ1 compounddecreases expression1
Temozolomideincreases expression1
Sunitinibincreases expression1
Acetaminophendecreases expression1
Arsenicaffects expression1
Vehicle Emissionsdecreases expression, increases abundance1
Benzo(a)pyrenedecreases methylation1
Cisplatinaffects cotreatment, increases expression1
Doxorubicindecreases expression1
Estradioldecreases expression1
Ethyl Methanesulfonateincreases expression1
Formaldehydeincreases expression1
Methyl Methanesulfonateincreases expression1
NADdecreases abundance1

ChEMBL screening assays

70 unique, capped per target: 69 binding, 1 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2433125BindingInhibition of human ARTD10 (809 to 1017) using NAD+ as substrate at 1 uM by fluorescence assayDiscovery of tankyrase inhibiting flavones with increased potency and isoenzyme selectivity. — J Med Chem
CHEMBL4345424ADMETInhibition of human recombinant N-terminal TEV-cleavgae site-fused-FLAG/Polyhis-tagged PARP10 (2 to 583 residues) expressed in Escherichia coli assessed as reduction in auto-PARylation using histone as substrate measured after 45 mins in prDesign and Discovery of an Orally Efficacious Spiroindolinone-Based Tankyrase Inhibitor for the Treatment of Colon Cancer. — J Med Chem

Cellosaurus cell lines

2 cell lines: 2 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B1GUAbcam A-549 PARP10 KO 1Cancer cell lineMale
CVCL_B2PDAbcam A-549 PARP10 KO 2Cancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.