PARP8
gene geneOn this page
Also known as FLJ21308pART16ARTD16
Summary
PARP8 (poly(ADP-ribose) polymerase family member 8, HGNC:26124) is a protein-coding gene on chromosome 5q11.1, encoding Protein mono-ADP-ribosyltransferase PARP8 (Q8N3A8). Mono-ADP-ribosyltransferase that mediates mono-ADP-ribosylation of target proteins.
Enables NAD+-protein mono-ADP-ribosyltransferase activity. Involved in protein auto-ADP-ribosylation. Predicted to be active in endoplasmic reticulum tubular network and nuclear envelope.
Source: NCBI Gene 79668 — RefSeq curated summary.
At a glance
- GWAS associations: 12
- Clinical variants (ClinVar): 113 total
- Druggable target: yes — 3 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_024615
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:26124 |
| Approved symbol | PARP8 |
| Name | poly(ADP-ribose) polymerase family member 8 |
| Location | 5q11.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ21308, pART16, ARTD16 |
| Ensembl gene | ENSG00000151883 |
| Ensembl biotype | protein_coding |
| Entrez | 79668 |
Gene structure
Transcript identifiers
Ensembl transcripts: 22 — 10 protein_coding, 6 nonsense_mediated_decay, 5 protein_coding_CDS_not_defined, 1 retained_intron
ENST00000281631, ENST00000502524, ENST00000503046, ENST00000503193, ENST00000503561, ENST00000503665, ENST00000503707, ENST00000503790, ENST00000503888, ENST00000505180, ENST00000505554, ENST00000505697, ENST00000507812, ENST00000510040, ENST00000510303, ENST00000511363, ENST00000513414, ENST00000513738, ENST00000514067, ENST00000515166, ENST00000515175, ENST00000898727
RefSeq mRNA: 5 — MANE Select: NM_024615
NM_001178055, NM_001178056, NM_001331028, NM_001427055, NM_024615
CCDS: CCDS3954, CCDS54849, CCDS82996
Canonical transcript exons
ENST00000281631 — 26 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001848826 | 50841966 | 50846519 |
| ENSE00002062768 | 50666637 | 50667186 |
| ENSE00003464714 | 50826755 | 50826803 |
| ENSE00003471220 | 50832781 | 50832854 |
| ENSE00003479261 | 50760292 | 50760362 |
| ENSE00003482062 | 50815432 | 50815524 |
| ENSE00003500473 | 50794853 | 50795417 |
| ENSE00003508032 | 50829892 | 50829961 |
| ENSE00003521644 | 50828312 | 50828384 |
| ENSE00003536800 | 50778560 | 50778650 |
| ENSE00003537028 | 50796982 | 50797032 |
| ENSE00003549962 | 50794207 | 50794332 |
| ENSE00003554318 | 50761821 | 50761898 |
| ENSE00003585559 | 50763148 | 50763242 |
| ENSE00003613761 | 50833979 | 50834048 |
| ENSE00003614172 | 50827944 | 50828056 |
| ENSE00003624524 | 50759643 | 50759732 |
| ENSE00003627797 | 50797138 | 50797233 |
| ENSE00003645724 | 50750151 | 50750188 |
| ENSE00003652908 | 50778069 | 50778129 |
| ENSE00003660055 | 50788523 | 50788589 |
| ENSE00003660919 | 50834931 | 50835015 |
| ENSE00003674375 | 50821213 | 50821338 |
| ENSE00003681724 | 50822335 | 50822400 |
| ENSE00003683796 | 50824908 | 50824975 |
| ENSE00003687831 | 50668071 | 50668125 |
Expression profiles
Bgee: expression breadth ubiquitous, 256 present calls, max score 96.32.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.5897 / max 169.1343, expressed in 1325 samples.
FANTOM5 promoters (11 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 56364 | 2.1489 | 740 |
| 56366 | 1.4292 | 654 |
| 56363 | 0.9156 | 262 |
| 56365 | 0.8052 | 478 |
| 56368 | 0.4606 | 240 |
| 56362 | 0.2230 | 78 |
| 56367 | 0.1992 | 83 |
| 56374 | 0.1525 | 48 |
| 56369 | 0.1184 | 37 |
| 56370 | 0.1131 | 36 |
Top tissues by expression
283 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| granulocyte | CL:0000094 | 96.32 | gold quality |
| monocyte | CL:0000576 | 96.20 | gold quality |
| leukocyte | CL:0000738 | 96.18 | gold quality |
| mononuclear cell | CL:0000842 | 96.18 | gold quality |
| blood | UBERON:0000178 | 96.07 | gold quality |
| spleen | UBERON:0002106 | 93.63 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 93.54 | gold quality |
| bone marrow cell | CL:0002092 | 93.24 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 93.23 | gold quality |
| thyroid gland | UBERON:0002046 | 93.13 | gold quality |
| gall bladder | UBERON:0002110 | 92.89 | gold quality |
| bone marrow | UBERON:0002371 | 92.80 | gold quality |
| right uterine tube | UBERON:0001302 | 91.83 | gold quality |
| colonic epithelium | UBERON:0000397 | 91.81 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 91.81 | gold quality |
| lymph node | UBERON:0000029 | 91.46 | gold quality |
| islet of Langerhans | UBERON:0000006 | 89.86 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 89.86 | gold quality |
| right lung | UBERON:0002167 | 89.41 | gold quality |
| bone element | UBERON:0001474 | 89.30 | gold quality |
| adenohypophysis | UBERON:0002196 | 89.08 | gold quality |
| vermiform appendix | UBERON:0001154 | 89.07 | gold quality |
| body of stomach | UBERON:0001161 | 88.69 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 88.33 | gold quality |
| stomach | UBERON:0000945 | 88.21 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 88.01 | gold quality |
| right coronary artery | UBERON:0001625 | 88.00 | gold quality |
| small intestine | UBERON:0002108 | 87.79 | gold quality |
| mucosa of stomach | UBERON:0001199 | 87.78 | gold quality |
| upper lobe of lung | UBERON:0008948 | 87.45 | gold quality |
Single-cell (SCXA)
Detected in 11 experiment(s), a significant marker in 9.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-2 | yes | 2846.41 |
| E-GEOD-180759 | yes | 2779.43 |
| E-HCAD-25 | yes | 1198.80 |
| E-CURD-122 | yes | 41.56 |
| E-CURD-46 | yes | 39.16 |
| E-MTAB-6678 | yes | 24.60 |
| E-ANND-3 | yes | 20.71 |
| E-CURD-88 | yes | 15.36 |
| E-CURD-112 | yes | 4.85 |
| E-CURD-97 | no | 1103.23 |
| E-CURD-89 | no | 723.28 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
200 targeting PARP8, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-3617-3P | 99.98 | 67.86 | 918 |
| HSA-MIR-4789-5P | 99.98 | 70.76 | 2721 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | parp8 | ENSDARG00000059789 |
| mus_musculus | Parp8 | ENSMUSG00000021725 |
| rattus_norvegicus | Parp8 | ENSRNOG00000010824 |
Paralogs (2): PARP6 (ENSG00000137817), PARP16 (ENSG00000138617)
Protein
Protein identifiers
Protein mono-ADP-ribosyltransferase PARP8 — Q8N3A8 (reviewed: Q8N3A8)
Alternative names: ADP-ribosyltransferase diphtheria toxin-like 16, Poly [ADP-ribose] polymerase 8
All UniProt accessions (13): Q8N3A8, D6R914, D6R9T2, D6RAL6, D6RB30, D6RC81, D6RCA6, D6RCN2, D6RF37, D6RF59, D6RFH0, D6RGZ9, E9PFI7
UniProt curated annotations — full annotation on UniProt →
Function. Mono-ADP-ribosyltransferase that mediates mono-ADP-ribosylation of target proteins.
Post-translational modifications. Auto-mono-ADP-ribosylated.
Similarity. Belongs to the ARTD/PARP family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8N3A8-1 | 1 | yes |
| Q8N3A8-2 | 2 |
RefSeq proteins (5): NP_001171526, NP_001171527, NP_001317957, NP_001413984, NP_078891* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom | Domain |
| IPR051838 | ARTD_PARP | Family |
Pfam: PF00644
Catalyzed reactions (Rhea), 1 shown:
- L-cysteinyl-[protein] + NAD(+) = S-(ADP-D-ribosyl)-L-cysteinyl-[protein] + nicotinamide + H(+) (RHEA:56612)
UniProt features (14 total): modified residue 4, region of interest 3, compositionally biased region 2, chain 1, domain 1, splice variant 1, sequence variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8N3A8-F1 | 66.07 | 0.26 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4): 395, 332, 367, 376
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-196807 | Nicotinate metabolism |
| R-HSA-9683610 | Maturation of nucleoprotein |
| R-HSA-9694631 | Maturation of nucleoprotein |
MSigDB gene sets: 389 (showing top):
CREL_01, BENPORATH_ES_WITH_H3K27ME3, GNF2_CASP8, GOBP_RESPONSE_TO_ENDOPLASMIC_RETICULUM_STRESS, MODULE_511, TATTATA_MIR374, CAGCTG_AP4_Q5, FOXD3_01, GOBP_CELLULAR_RESPONSE_TO_TOPOLOGICALLY_INCORRECT_PROTEIN, NFKB_Q6, GOMF_KINASE_ACTIVATOR_ACTIVITY, NFKB_C, IRF7_01, SOX9_B1, FOSTER_TOLERANT_MACROPHAGE_UP
GO Biological Process (2): endoplasmic reticulum unfolded protein response (GO:0030968), protein auto-ADP-ribosylation (GO:0070213)
GO Molecular Function (8): NAD+ poly-ADP-ribosyltransferase activity (GO:0003950), nucleotidyltransferase activity (GO:0016779), kinase binding (GO:0019900), protein serine/threonine kinase activator activity (GO:0043539), NAD+-protein-cysteine ADP-ribosyltransferase activity (GO:0140803), NAD+-protein mono-ADP-ribosyltransferase activity (GO:1990404), transferase activity (GO:0016740), glycosyltransferase activity (GO:0016757)
GO Cellular Component (3): nuclear envelope (GO:0005635), membrane (GO:0016020), endoplasmic reticulum tubular network (GO:0071782)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Metabolism of water-soluble vitamins and cofactors | 1 |
| Translation of Structural Proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| pentosyltransferase activity | 2 |
| cellular response to unfolded protein | 1 |
| response to endoplasmic reticulum stress | 1 |
| intracellular signal transduction | 1 |
| post-translational protein modification | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| enzyme binding | 1 |
| protein serine/threonine kinase activity | 1 |
| protein kinase activator activity | 1 |
| NAD+-protein mono-ADP-ribosyltransferase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| catalytic activity | 1 |
| transferase activity | 1 |
| nucleus | 1 |
| endomembrane system | 1 |
| organelle envelope | 1 |
| cellular anatomical structure | 1 |
| endoplasmic reticulum subcompartment | 1 |
Protein interactions and networks
STRING
2500 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| PARP8 | PARP11 | Q9NR21 | 705 |
| PARP8 | PARP10 | Q53GL7 | 699 |
| PARP8 | PARP15 | Q460N3 | 675 |
| PARP8 | PARP4 | Q9UKK3 | 635 |
| PARP8 | PARP3 | Q9Y6F1 | 630 |
| PARP8 | PARP12 | Q9H0J9 | 613 |
| PARP8 | PARP14 | Q460N5 | 594 |
| PARP8 | PARP9 | Q8IXQ6 | 591 |
| PARP8 | PARP2 | Q9UGN5 | 555 |
| PARP8 | ZC3HAV1 | Q7Z2W4 | 529 |
| PARP8 | TIPARP | Q7Z3E1 | 523 |
| PARP8 | TNKS2 | Q9H2K2 | 506 |
| PARP8 | TNKS | O95271 | 487 |
| PARP8 | PDE4DIP | Q5VU43 | 439 |
| PARP8 | ART5 | Q96L15 | 417 |
IntAct
16 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| YWHAG | BLTP3B | psi-mi:“MI:0914”(association) | 0.640 |
| YWHAH | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.610 |
| YWHAB | BLTP3B | psi-mi:“MI:0914”(association) | 0.610 |
| YWHAE | PIK3C2A | psi-mi:“MI:0914”(association) | 0.570 |
| YWHAH | BLTP3B | psi-mi:“MI:0914”(association) | 0.570 |
| YWHAZ | PIK3C2A | psi-mi:“MI:0914”(association) | 0.570 |
| PARP8 | HTR6 | psi-mi:“MI:0915”(physical association) | 0.370 |
| HIF1AN | CNOT1 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAG | C1orf226 | psi-mi:“MI:0914”(association) | 0.350 |
| PARP8 | PRMT3 | psi-mi:“MI:0914”(association) | 0.350 |
| M | psi-mi:“MI:0914”(association) | 0.350 | |
| YWHAQ | MCRIP1 | psi-mi:“MI:0914”(association) | 0.350 |
| YWHAG | FOXO6 | psi-mi:“MI:0914”(association) | 0.350 |
| PARP8 | GSK3A | psi-mi:“MI:0914”(association) | 0.350 |
| CREB3L2 | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (23): PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-RNA), PARP8 (Two-hybrid), PARP8 (Affinity Capture-RNA), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PUS1 (Affinity Capture-MS), GSK3A (Affinity Capture-MS), YWHAH (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS), PARP8 (Affinity Capture-MS)
ESM2 similar proteins: A0A0R4IXF6, A0JMR6, A5WW08, F4HRV8, O17482, O60934, O88974, O94988, P12757, P14629, P49021, P79457, Q08AW4, Q08D35, Q12789, Q28C33, Q2TB10, Q3B7T1, Q3UD82, Q3UWM4, Q498F0, Q5F363, Q5F3F2, Q5FWP4, Q5HYC2, Q5JSH3, Q5R431, Q5R7T9, Q5R9R1, Q5RGA4, Q5VVJ2, Q60665, Q63505, Q69Z66, Q6GQV7, Q6INA9, Q6NVE8, Q6P256, Q6ZMT4, Q8C5W4
Diamond homologs: Q2NL67, Q3UD82, Q5RDU4, Q6P6P7, Q8N3A8
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 19 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 6 | 268.7× | 2e-12 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 6 | 237.1× | 2e-12 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 6 | 237.1× | 2e-12 |
| Activation of BH3-only proteins | 6 | 175.2× | 1e-11 |
| RHO GTPases activate PKNs | 6 | 112.0× | 2e-10 |
| Intrinsic Pathway for Apoptosis | 6 | 103.3× | 3e-10 |
| SARS-CoV-1-host interactions | 6 | 62.0× | 6e-09 |
| Apoptosis | 6 | 59.3× | 7e-09 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein targeting | 5 | 107.8× | 1e-07 |
| intracellular protein localization | 6 | 36.9× | 7e-07 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
113 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 73 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
4553 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:50666178:G:T | donor_gain | 1.0000 |
| 5:50723489:G:GT | donor_gain | 1.0000 |
| 5:50759639:GCAG:G | acceptor_loss | 1.0000 |
| 5:50759641:A:AG | acceptor_gain | 1.0000 |
| 5:50759641:A:C | acceptor_loss | 1.0000 |
| 5:50759642:G:GT | acceptor_gain | 1.0000 |
| 5:50759642:GA:G | acceptor_gain | 1.0000 |
| 5:50759642:GAT:G | acceptor_gain | 1.0000 |
| 5:50759642:GATA:G | acceptor_gain | 1.0000 |
| 5:50759642:GATAA:G | acceptor_gain | 1.0000 |
| 5:50759708:G:GG | donor_gain | 1.0000 |
| 5:50759730:CAGGT:C | donor_loss | 1.0000 |
| 5:50759731:AG:A | donor_loss | 1.0000 |
| 5:50759732:GGTAA:G | donor_loss | 1.0000 |
| 5:50759734:T:G | donor_loss | 1.0000 |
| 5:50761810:A:AG | acceptor_gain | 1.0000 |
| 5:50761811:T:G | acceptor_gain | 1.0000 |
| 5:50761813:A:AG | acceptor_gain | 1.0000 |
| 5:50761814:T:G | acceptor_gain | 1.0000 |
| 5:50761818:A:AG | acceptor_gain | 1.0000 |
| 5:50761818:AAG:A | acceptor_gain | 1.0000 |
| 5:50761819:A:AG | acceptor_gain | 1.0000 |
| 5:50761819:AG:A | acceptor_gain | 1.0000 |
| 5:50761820:G:A | acceptor_gain | 1.0000 |
| 5:50761820:G:GT | acceptor_gain | 1.0000 |
| 5:50761820:GGA:G | acceptor_gain | 1.0000 |
| 5:50761894:GGCAG:G | donor_gain | 1.0000 |
| 5:50761895:GCAG:G | donor_gain | 1.0000 |
| 5:50761895:GCAGG:G | donor_gain | 1.0000 |
| 5:50761899:G:GC | donor_loss | 1.0000 |
AlphaMissense
5601 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:50763185:T:C | L154P | 1.000 |
| 5:50763206:T:A | V161D | 1.000 |
| 5:50778104:T:C | L185P | 1.000 |
| 5:50778578:T:A | W200R | 1.000 |
| 5:50778578:T:C | W200R | 1.000 |
| 5:50778609:T:A | V210D | 1.000 |
| 5:50778612:G:C | R211P | 1.000 |
| 5:50778615:T:C | L212P | 1.000 |
| 5:50788526:C:A | P225H | 1.000 |
| 5:50788538:T:A | V229D | 1.000 |
| 5:50788583:T:C | L244P | 1.000 |
| 5:50797183:T:C | C509R | 1.000 |
| 5:50797184:G:A | C509Y | 1.000 |
| 5:50797184:G:T | C509F | 1.000 |
| 5:50797185:T:G | C509W | 1.000 |
| 5:50797192:T:C | C512R | 1.000 |
| 5:50797193:G:A | C512Y | 1.000 |
| 5:50797194:T:G | C512W | 1.000 |
| 5:50797229:T:A | L524H | 1.000 |
| 5:50815441:T:A | C529S | 1.000 |
| 5:50815441:T:C | C529R | 1.000 |
| 5:50815442:G:A | C529Y | 1.000 |
| 5:50815442:G:C | C529S | 1.000 |
| 5:50815442:G:T | C529F | 1.000 |
| 5:50815443:T:G | C529W | 1.000 |
| 5:50815454:T:C | L533P | 1.000 |
| 5:50815456:T:A | C534S | 1.000 |
| 5:50815456:T:C | C534R | 1.000 |
| 5:50815457:G:A | C534Y | 1.000 |
| 5:50815457:G:C | C534S | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000052886 (5:50688972 G>A), RS1000083098 (5:50743579 G>A), RS1000083524 (5:50688675 A>G,T), RS1000094818 (5:50784044 A>C), RS1000130279 (5:50772188 T>A,C), RS1000139052 (5:50705435 TAAG>T), RS1000139567 (5:50812298 G>T), RS1000152461 (5:50665117 T>C), RS1000179245 (5:50665358 G>A,T), RS1000209399 (5:50788452 A>C,G,T), RS1000229933 (5:50828158 A>C,G), RS1000255294 (5:50834983 T>C), RS1000259214 (5:50754622 T>G), RS1000287475 (5:50807220 ACT>A), RS1000304690 (5:50711569 T>C)
Disease associations
OMIM: gene `` | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
12 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001561_2 | Myopia (pathological) | 4.000000e-06 |
| GCST002092_3 | Callous-unemotional behaviour | 5.000000e-06 |
| GCST002701_30 | Verbal declarative memory | 1.000000e-06 |
| GCST002701_31 | Verbal declarative memory | 3.000000e-08 |
| GCST003074_10 | Cerebral amyloid deposition in APOEe4 non-carriers (PET imaging) | 8.000000e-08 |
| GCST003991_17 | Childhood ear infection | 3.000000e-07 |
| GCST007325_69 | General risk tolerance (MTAG) | 5.000000e-10 |
| GCST007847_111 | Type 2 diabetes | 8.000000e-09 |
| GCST007847_57 | Type 2 diabetes | 2.000000e-07 |
| GCST010118_42 | Type 2 diabetes | 4.000000e-08 |
| GCST010724_10 | HOMA-B (corrected for HOMA-IR) | 6.000000e-09 |
| GCST010724_9 | HOMA-B (corrected for HOMA-IR) | 6.000000e-09 |
EFO canonical traits (8, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004207 | pathological myopia |
| EFO:0005322 | callous-unemotional behaviour |
| EFO:0004874 | memory performance |
| EFO:0006805 | word list delayed recall measurement |
| EFO:0007707 | cerebral amyloid deposition measurement |
| EFO:0007904 | susceptibility to childhood ear infection measurement |
| EFO:0008579 | risk-taking behaviour |
| EFO:0004469 | HOMA-B |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3091262 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
3 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 20,686 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3137320 | TALAZOPARIB | 4 | 5,534 |
| CHEMBL521686 | OLAPARIB | 4 | 13,038 |
| CHEMBL4112930 | PAMIPARIB | 3 | 2,114 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
7 potent at pChembl≥5 of 7 total, top 7 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.89 | IC50 | 13 | nM | CHEMBL5403305 |
| 6.62 | IC50 | 240 | nM | OLAPARIB |
| 5.96 | Kd | 1100 | nM | TALAZOPARIB |
| 5.89 | IC50 | 1300 | nM | CHEMBL5199558 |
| 5.75 | IC50 | 1789 | nM | OLAPARIB |
| 5.53 | IC50 | 2934 | nM | CHEMBL5558410 |
| 5.08 | IC50 | 8400 | nM | PAMIPARIB |
PubChem BioAssay actives
7 with measured affinity, of 91 total; 6 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| sodium 1-[[4-fluoro-3-(3-oxo-4-pentan-3-ylpiperazine-1-carbonyl)phenyl]methyl]quinazolin-3-ide-2,4-dione | 2019988: Inhibition of PARP8 (unknown origin) | ic50 | 0.0130 | uM |
| Olaparib | 2019988: Inhibition of PARP8 (unknown origin) | ic50 | 0.2400 | uM |
| Talazoparib | 1895784: Binding affinity to PARP8 (unknown origin) assessed as apparent dissociation constant | kd | 1.1000 | uM |
| 3-[4-(2-hydroxypropan-2-yl)phenyl]-6-methyl-2H-pyrrolo[1,2-a]pyrazin-1-one | 1925210: Inhibition of human PARP8 by chemiluminescence assay | ic50 | 1.3000 | uM |
| 4-(5-chloro-2-methoxyphenyl)-N-[5-[[1-[2-fluoro-5-[(4-oxo-3H-phthalazin-1-yl)methyl]benzoyl]piperidin-4-yl]methoxy]-1,3,4-thiadiazol-2-yl]-6-methylpyridine-3-carboxamide | 2080541: Inhibition of PARP8 (unknown origin) | ic50 | 2.9340 | uM |
| (2R)-14-fluoro-2-methyl-6,9,10,19-tetrazapentacyclo[14.2.1.02,6.08,18.012,17]nonadeca-1(18),8,12(17),13,15-pentaen-11-one | 1683875: Inhibition of PARP-8 (unknown origin) pre-incubated for 30 mins before addition of activated DNA and NAD by chemiluminescent assay | ic50 | 8.4000 | uM |
CTD chemical–gene interactions
38 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, decreases expression, decreases methylation | 6 |
| sodium arsenite | decreases expression, affects cotreatment, increases abundance | 3 |
| trichostatin A | affects cotreatment, decreases expression | 2 |
| entinostat | decreases expression, affects cotreatment | 2 |
| Silicon Dioxide | decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| propionaldehyde | increases expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| butyraldehyde | increases expression | 1 |
| manganese chloride | affects cotreatment, decreases expression, increases abundance | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| pentanal | increases expression | 1 |
| phenethyl isothiocyanate | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | decreases expression, affects cotreatment | 1 |
| abrine | increases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| MRK 003 | decreases expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Acetaminophen | increases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Aldehydes | increases expression | 1 |
| Arsenic | affects cotreatment, decreases expression, increases abundance | 1 |
| Benzo(a)pyrene | decreases methylation | 1 |
| Calcitriol | decreases expression | 1 |
ChEMBL screening assays
17 unique, capped per target: 17 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3096300 | Binding | Binding affinity to ATRD8 (unknown origin) assessed as change in melting temperature by thermal stabilization assay | Chemical probes to study ADP-ribosylation: synthesis and biochemical evaluation of inhibitors of the human ADP-ribosyltransferase ARTD3/PARP3. — J Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.